#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,465,750
TCATCACCATCATCACTGTCATCACCACCATAACCATCACTGTCATCACCATAATCATCACTGTCACCATCACCATTCACCACTTAAACCACCACCATCATCACCAACACTACCACCACTACCACCTCACTTAATTTATGTATCACTTCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,990,850
TCAGCCCACAGAGCCCCTGCTGCTGTCCTGTGACCGGGAATTTGTACACAGGGTGCGCACTCACATGACCTCATCCTAGTTCCTGCTGTTGCCCAACCACGTTTTAGGATCTATCTGAGCGGCTCTGCTCATCTTTCCCCTCCGGAACAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,080,000
TTACAGGCGTGCGCCCTGTACTCCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCTGCCTCCGCTTTTCAAAGTGCTGGGTTTACAGGCCCGAGCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,740,800
CCTCTTCCTCGTGTTGATGTTGCTGTGGAAGGCAGGGTGGGTCCTACCCATTGTGTCTGCCCCAGAGTAGTGAATTCTGGACTAAATACTGTTTCCGTATTTTTTAAATGTCTCCAAGGCACTCTCCGTGGGGCAGTGTAGACCAAAGGT
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,914,400
CGGCGGGGCAGTACACCACGGCCAGTAAGTTCCAGGTCTACGGCAAGGCCGTCAAGGTGGTCGGCGCGGGGCCCTGGTACACCCGCTTCAACGCCCCCTCCACCCAGGACAACACCGACGTCGGCTTCCGGGCCGAGGCCAGTGCCAAGG
0no label
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
2,760,290
CGGCGTTTAAGTCGGCGTCGATGGCCATCTGTTTACCGGGCATACCATCAAGAACAAAACGTGCGCCAACTTCAGCAATACGCCCTGCCCCTTTGGTGATGACCATAAAGTTGATGATAACTAAAATAACAAAGACCACGATACCGATGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,935,500
GGCAGTGGGGGTTCTTTCTTTAGCAGTCCCCTCCTAGCACCCACACAGTGCCAGGCCCTGGGAGGGCCAGCTCTGCACCCCAAAGCTGCTAAGTCTGTGGTCCAGGAGGTAGGTGGCCGCAGCTGCACCTGCCCGTCCCTCAGCCAGGGG
11
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Streptococcus mutans UA159
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
468,780
CAGCTCTTCAAGTTTAGAGAATCGTGGTTTTAATCAAGTGCAAGCTTTTTTAGATGAGGCAAAATTGTCTTATCATGATTTATTAGGCAAAGAAGATGGTAGTGTAAAACAATCAAGTAAAACACGTCAAGAACGCCTAAAGACTCAACA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,915,750
AGTGTCCGGAAGACTTGGGCCCTCTGGGAGGCTGTAGCCACTCAGTCATCCCTGCCAAGGATGGTGGGACAATGGCAGTGTCAACCTTGCCAAGGGGCTGGGTTTCCAGCCATGGCTGGGCCCTCAGCCTGCTCGGTGGAGCATCTCATC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
625,200
AGCCCCCACCCTGCCTGCATGCAGCCCTGGGGATGGGTGTATCCATGAGGCTCACCCCCTGTGCAGCTAGGATGGAACTGCACCCCCTCCTCAGAGCAGCCCCCTCAGGCCAGAGCTTCAGACCCTCAGAGCTTCAGTGGACAAACAGGG
11
G000010325
ASM1032v1
GCF_000010325.1
PRJNA224116
SAMD00060914
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1
640,753,037
RS_GCF_000010325.1
Monoisolate
Complete Genome
Full
representative genome
Major
387,092
387,092
Nitratiruptor sp. SB155-2
strain=SB155-2
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Nitratiruptor
Nitratiruptor sp. SB155-2
true
Nitratiruptor sp. SB155-2 ASM1032v1
Eubacteria
Proteobacteria
1
1
1
1
1,877,931
1
39.69
1,877,931
1
1,933
610,396
95.761026
98.78
0
0
319
yes
yes
yes
20
high
235,170
ATTACGCTAGGATTTCTCTTTTTGTATAGAGTCCTAGCGTATGTGCCGGTACCTGGAGTAAATATAGACATAGTGAAAGAGTTTTTCGATTCCCAAAGCGGCAATGCCCTTGGCATGTTCAATATGTTTAGCGGTAACGCTGTACGAAGA
0no label
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,878,240
GGTCCTGCCAAACAAGTATTGAGCTACATGGTAAAAGGTGGACCGGTTGAGAGCATGCTCCAGGGTGGCTTCTCCGCTGTCTTGCCGAAAGGGACAGAAGTAAAAGGACTTGTCATCAAGAACGGCGTAGCCACTGTCGATTTTTCCAAA
0no label
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Methanococcus voltae A3
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
472,810
AAAGATAGTGTACAAATGAAGAATAGACTCATTAATCGAGCGAAAAACGTAGCAAAAGAGTACGAAATAATCACCGATGAAGGTTTGATTATAAAGGGAATTGTAAAATATGCAGAAGGCGAATTAAATCAAAATACGAGTAATGTTAAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,808,000
GGGTGCGGTGCATCTCACTGGGACTCTGTGCCTTCTGAGGGATGTGCTGGGGAGCGCAGGAGGCCGTGGGCTCTTTAATCCTTGGGGACAGTGACATGAGACCCCAGCCAAGCCCTGGTGTGCATGCTGGGGAGTGCAGGAGGCTGTGGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,743,900
TCATGACAGTTTTCTAGATGACTCTGGGCAGGAGATCTAGATGTCACTGGACATAAAGATTCTCCTTTTATGCAACCAGCTTTTCTCCTATGGAAGTTCATTCTGACACAGGTTAGACACCTTTATAGTCCATGAAATTGAAAACAGGTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,798,400
AACCTGCCTACCAGGTAAACAGGCGAAACCTAGAACCTGCCTACCAGGTAAACAGGCAAAATCTTGTCAGGTATAAAGAGCTTCTCTTGGGGGCAGAGTCTGCTGGCTAGGAATTGCTGTGGAGTGGGGGTGTATCCAGGCTGGAGGGCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,112,450
ACACCCCTAGGTGAGCATTCGACAGCCTGGAGCAGCACCCACACCCCCAGGCGAGCATCTGACAGCCTGGCGCGGCACCCACAACCCCAGGTGAGCATCCGAAATCGTGGAGCAGCACCCCACACCCACAGGTGGGCATCTGACAGCCTG
11
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Porphyromonas gingivalis ATCC 33277
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
1,490,060
CTTCTGCGATACCGGCTCTTTCGGCCCAGCGTTGCGATCCGATCTTCGTGATCTGCTGAGGTGTACGAATACCGGCCACAACGTCCTCGCCCTGAGCGTTGATGAGGTATTCCCCGTTGAAGAGATCCTCACCGCTACCGGCATCACGAG
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
4,960,540
CGCCCGGGAGGCGCTCCCGGTCGCCGTCCAGGCGACCGGCCACGGCATCGCGGCGTCCGCGCGCGGCGGTGTCCTCGTCTCCACCCGCCGGATGAACGCGGTCGCCGTCGACCCGCTCACCCGTACGGCGCACGTGGAGGCCGGAGCACA
0no label
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Lactococcus lactis subsp. lactis Il1403 IL1403
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
998,660
ATCAAGACGGAGATGTTGCCGGATTGAAATCAGTTGCCCTTCGATTTGTTGGACGAAATGCTTATGGTTTTTTGAGAGGAGAAAAAGGAGTACATCGTTTAGTACGTATTTCACCTTTTGATTCAGCCAATCGTCGTCATACTTCATTTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,263,750
GTGCACGCCTGTGTGTTTGTCCATGCCCGTGCGTCTGTGTTTTTGTGTCCCTGTTTGCAAATGTGTGTGTGTTGGGTTTTGTGCTCATATATGCTAGTGTTTTTGTGTATGCATGTGCCCATTCATGTGTGTGTATGTTTGTGTGTGAGT
11
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Treponema denticola ATCC 35405
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
2,589,600
TGGGAATGTTGGTTTTAAGCTCGATGATAGCTCTACCGGTCGCAACAGCCCTTCAATTAAAAATAAGCTTTAAAAAGACATTAATTTTTTCTATTTTTATAAGCGTAGCAGACATAATGCTCGGCTTGGTCTTATCCTATCACCTAAATG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,077,650
GTGTGGTCAAGATTCACCTGGGAGAGGAAGTGGGCAGGGGCAGAGGAGTGTGCCCACCTGAGCTGAAAGGCTGCATGGCAGGTGACCATTATCACCAGTGTCGCCAGCCAGGTCACCTCTCTGAATTTTGTGGTTGCAACCTCCATGATT
11
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Streptococcus agalactiae 2603V/R
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
131,950
CCCTAACCAATTATCGGGAGGACAAAAGCAACGCGCAGCAATTGCTAGAGCATTTATTAATCATCCTAAGGTTATCTTGGCAGATGAGCCAACAGCTAGCCTTGATGAAGAACGTGGGCGTCAAGTTACAGAACTTATTCGTCAGGAAGT
0no label
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Alcanivorax borkumensis SK2
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
1,438,840
CTGATGGTGTAGGAGAACAGCATGATTAATTTAGAATTGCCCGAGAAGCTTAAACAAACCCAGCAGATGGCCCAGCAACTGGCCAGCGGTGTTTTTCGCCCGATTTCACGCAAATACGACGCCATTGAACACTGCGAGACTCCGGAAGAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,775,800
TTGCTTTAATTCTGACTACCTCATATGGAATTTTTTTCTTTTCAAAGGAAACTTGGCTGTAACTTCAAAAGAAGATTTGATTCTTTATTTCTGGACTGCATATATATATATAACAAGGCCATTAAAATGTCGGGAGCCTCAGTGAAGGTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,430,100
TCCCTTAGAGCAAGGCAAATATTTTAGCATTCTTTTAAATATATATTTTTAAAGGTCTGGCTTTAAAGCCTAGAAGCTCAGGAAACCTGAGCTCAGGGTGAAATTCTCTTTGCAAGTAGGTTTGGGCCAGTGCAAATGACATGAATTATA
11
G000008805
ASM880v1
GCF_000008805.1
PRJNA57817
SAMN02603997
null
2005/05/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
637,000,189
RS_GCF_000008805.1
Monoisolate
Complete Genome
Full
reference genome
Major
122,586
487
Neisseria meningitidis MC58
strain=MC58
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria meningitidis
true
Neisseria meningitidis MC58
Eubacteria
Proteobacteria
1
1
0.9
1
2,272,360
1
51.53
2,272,360
1
2,107
632,964
82.059313
99.75
1.9
80
322
yes
yes
yes
20
high
1,456,910
CCGACGCCCATCCAAGCCGCCGCCATTCCCAAAGCACTCGCCGGTCATGATTTGCTAGCCGCCGCGCAAACCGGCACAGGCAAAACCGCCGCCTTTATGCTGCCCAGTCTGGAACGCCTCAAACGTTACGCCACCGCCAGCACCTCGCCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,417,850
AGTTCCAGATGGAAAATGAGGAGCCACGTTCTTCAGAAGGTAGTGATCTGGCGTGATTCAGGCGTGGGGAGCAGGGTTTCACCACGCCTTCAGGCACACCACAAGATAATGAGAAAATTCTCCCTGCATCTATCGCAGACCAATAAAGTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,673,600
GAAGACGGCTTGAGGCCAGGAGTTCAAGACCAGTCTGGGCAACATAGCAAGATCCCATCCCTACAAAAATTTAAAAATTAGCCAGGCGTGGTGGTTCACACCTGCAGTCCTAGCCACTCCATCACACCTGTAGTTCTAGCCACTTAGGAG
11
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Porphyromonas gingivalis ATCC 33277
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
1,772,030
ACTTCCGCTCTTTGACGGGCTTGGCCGGTTCCAACCGATCGATCGGCACAGTCGTTTTGATCATTCCGAGAGCAATGGTAGCCTCCCGATCATTCATATCTATAATACTGCCTATAGCCGTCTGTCCTTTGATTCGTACCGTATCGCCCA
0no label
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
1,864,070
TTGCCAGCGCACTGAATTGCCGCAGGCCGTGAATGCGCACGCGCCGGGCGCTGGCGAGCAGGTGCGCGGCTTCGCGCAGGGCTGTCGGCGAGAGCTGCGTGAGACACCGCTCGATGTTGCCGATGGACTCCCGCGCGAGCCGGGCCACCG
0no label
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Corynebacterium jeikeium K411 K411 = NCTC 11915
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
18,460
TTAAGCCTACTGAACCTAATTCTCAGGCCACCCCAGCATGGGTATCAAACCTCGGGTGATAGCGATCAAGAATTTGGTGCATAGCCGGTGTCGAGGTGTTCAAGCTGAATATATGCAGGCAGGAAACCAGTAACGGGATGGTACCCAGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,213,650
CCACAGGAGCGGACTTTGTAGTGTTTGTTGGAACTGCGGGTCCCACCCAGCCCGCACTTGCTGAACTGGTGGCTGCTCATCAGCGCCTTCAGGCCTCAAATATCCCAATAATGTGCCCTATACCCAGTTCTCAGCTCTCGAGTCACTGTC
11
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Geobacter sulfurreducens PCA
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
2,101,450
AGGAAGACGTGACCATTCTGACCCGCTACATTGCCGGTGCCTACCTGAAAATTCTGGGACTCTGCCTGGCGTCCTTCGTCGCCATTTACCTAGTCATCGACTTTCTGGAAAAGATCGGCCGGCTCCTCCGTTTCCAGCCCCGGTGGATCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,106,050
GGGAGGTGCCAGTTCAAACTCCATATTCTGAGTCCATCAGTGAAGCAGACGGCCCCAATAGGAGCCCCACACACAGGTGCAATGGCCACTGCCCCCTACACCTAGGAGGACAAAGCTGAGCTGGGGAGACAGAGGAGACCTGGAGGAAGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,620,200
TGGACTTTCTCAAGGGCTCTTTCTCCAGCTTAGTCATTGCCTGAAGTGTAACTGCCCGATGGGTTCTTTCTGCCCGCTACACAGACAAAGTCAATTGACTGAAACCATGGCATTGCAGTAAAGAAAGAGTTTAATTGCTGCGAGGCCAGC
11
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Bacteroides fragilis YCH46
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
2,269,670
CTTAAAGGAAAATCCCAGGCGGGCGTTCCGTCTTCTTTCTCAGGCTTACGGCTTGATCTATGCTGCACAGTTTGCACGCAATATGCAAGGAAAATCATTTCTAACAAACGAAGAAACCGGGATTTTGTTGCATGAATTGGAGAAAGGGGA
0no label
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Geobacter sulfurreducens PCA
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,328,990
ATGCCGCGTTATGCCGAAGAGTCGTTCCGCGCCGCGCTTCAGCTGGATCCGGCCCACGAGGAGTCGCTTGCCTGCCTCAGGAAGGTCACAGGGGAGGAGTAGGATATGTTTGGCTTCAGTATTGCAGACTGGATCTTCATTGCGCTGGTC
0no label
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
443,820
TTTACTGTTTATCCACATGACGACACTTTATCTAACCGAACCAGGAACTATACTCCGTTATCGCAACGAGTCGTTAATTATCATGAAGCAGGAAAAATCTCACAATTGTCGCCTAGCAGAAATCACGCTTATAGTTGTTTTACCAGGTGT
0no label
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
2,623,530
TCTCGACCAGAGTGGTTAATAAATATTGCCGCGGCATTATACAGAGCGTAACCGATTGCATCTACCCCTTTTTGCAAAAAATGCTTGCTATCCCCGAAGGGCGGGTTACTATAGACTGAATAACCTGCTGATTTAGAATTTGATCTCGCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,319,800
AGCCTGGCCAACATGGTGAAACCCTCCTGTCTTTACTAAAAATACAAAAATTAGCCGGGTGTGGTGACACGCACCTGTAGACCCAGCTTCTCGGGCGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGCAGGTTGCAGTGAGCCAA
11
G000009965
ASM996v1
GCF_000009965.1
PRJNA224116
SAMD00061071
null
2005/01/05
Kyoto University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1
638,154,520
RS_GCF_000009965.1
Monoisolate
Complete Genome
Full
representative genome
Major
69,014
311,400
Thermococcus kodakarensis KOD1
strain=KOD1
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Thermococcus
Thermococcus kodakarensis
true
Thermococcus kodakarensis KOD1
Archaea
Euryarchaeota
1
1
0.9
0.9
2,088,737
1
52
2,088,737
1
2,314
650,473
91.73242
100
0
0
190
no
yes
yes
19
medium
1,015,820
GTCGGCGTTCCCGACAAGCAGGGCAGAAAGGAGATACTCCAGATCCACACCAGAGGAATGCCGATCGAGCCCGAGTTCAGGAGGGACAAGGTAATCGAGATACTCGAGGAGCTTGAGAAGAACGACACCTACCGCGAGGCCGCTGAGAGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,985,050
GAGTGTGCCGTGGATACCTACGTGGCGTCACAGGTGCCTAGAGCGGGCGGCGCTGGGGAGCTGGATGCCAGCAGGCTCTGGAGCTGAGTAGTAACCACAGCCAGGAATCCCGGCAGTGCCAGCCCCGCAGACGCCTGCCCACAGGAGAAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,623,900
AACCCGGGAGGCGGAGCTTGCAGTGAGCCGAAATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAGAAAAAAAAAAAAAAAAACAAAAAGAACGCCACCAGAGGCTGGGGCTGCTGGCTCACGCCTGTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,314,800
AGCCCAATGATGGTGAACAGGGTGGGGTCAATGACCATGTCACCTCTTCCCCTCACAGCCGCCTTCATGCAGCTCTTTTGGAGCAGGTGTGCAACTCCTGTGAGCGCTGTTTGCAGGCCTGTCCCCTCCCCTGGACTATGAGCTTCCTGG
11
G000008545
ASM854v1
GCF_000008545.1
PRJNA57723
SAMN02603986
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
637,000,321
RS_GCF_000008545.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,274
2,336
Thermotoga maritima MSB8
strain=MSB8
null
Bacteria
Thermotogae
Thermotogae
Thermotogales
Thermotogaceae
Thermotoga
Thermotoga maritima
true
Thermotoga maritima MSB8 ASM854v1
Eubacteria
Bacteria
1
1
0.9
1
1,860,725
1
46.25
1,860,725
1
1,866
602,696
95.430706
100
1.79
100
312
yes
yes
yes
20
high
260
TGGACTATGCAATTATTCCATTTTTCCAAACAGTACTTGAAGGTGCTCTCTTGTGTGTTAGAATGGTTTATGGAAAGGAAGGATATGGAAGGTCAAAAAACATCTTGCTTTCAGAGTGTGTTTGTGGTATAATTTCTCTTGAACTCAACG
0no label
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
2,703,220
CCCCGCGATCCCGCCCCCGATGACGACGACCTGCCCCATACCCGTGCGCGTCTGAGTTGTGCTCATGTCCCCACTTTGTCAGACCTCACTGACAGTCCGGGCCGGGGGCCCGGTGACCTGGGTGAGTCCGGACCGTGACCGCGCCGGGAC
0no label
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Clostridioides difficile 630 ASM920v1
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
1,733,290
GTTCTGGTGTAATAGTAATATTGTAATTATTTACAACATTATTTATTGTATTTGCTATTTGATTGGTATCTTTTGTACCATTCTTTACAATTTCTGTTTTTATATCATTCATTACACCTGTTGCTTTTTCTTGCCCTATATCATCTCCTA
0no label
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Macrococcus caseolyticus JCSC5402
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
896,220
AGTAAAGATTTTAACGGCATCTGATTTTGCCGCAGAACGTTTTAAGCCAGGTAAGGTGCTGATGATCCCATTTAAAAATGAGCGAGTTACGCTTACAATCAAATCGTATCGTACCCACAAAAACTTCCATATGCTAGCATTTGAAGGTTT
0no label
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Ames
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
840,060
AAAAATCGATAAAATGTTTTGTTGTAGAAGCTATTTAAAGAAATATATTCAATTTTATATAAGTTATAAGGTGTTTTTTCGAATAATCATCGGTAAGAAAAAGGGGGATTATAATGGAATCGTCTGTTATTAAAGTGTTAGATGATTTAG
0no label
G000007365
ASM736v1
GCF_000007365.1
PRJNA224116
SAMN02604269
null
2002/07/02
Uppsala Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/365/GCF_000007365.1_ASM736v1
637,000,045
RS_GCF_000007365.1
Monoisolate
Complete Genome
Full
representative genome
Major
198,804
9
Buchnera aphidicola str. Sg (Schizaphis graminum)
strain=Sg
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Erwiniaceae
Buchnera
Buchnera aphidicola
true
Buchnera aphidicola str. Sg (Schizaphis graminum) Sg
Eubacteria
Proteobacteria
1
1
1
0.9
641,454
1
25.33
641,454
1
600
191,650
88.027201
98.77
0
0
206
yes
yes
yes
20
high
393,380
ATAATCTTCTTTTCTTAAACCTAATTCTGATAAACGTAAATCTAAAACAGAAATACGTTCTTCACGTTGAGATCCACCTATTAATTCTCCAATACCTGGAACTAATAAATCCATTGCAGCAACAGTTTTTTTATCATCATTTAATCTCAT
0no label
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
3,592,160
CCTGTGGCTACGCGATGTGCCCATGCTCGATCCGGCGTTCGGCGACGCCGGGCAGATCTTTGACCCGTTCGTGTACGCCGGGCTGCTGGCGGGTGTCACCCAACGAATATGTATCGGAACCGCGGGCATCGTCATGACACTGCGTCACCC
0no label
G000008265
ASM826v1
GCF_000008265.1
PRJNA224116
SAMN02603345
null
2004/06/08
Institut of Microbiology and Genetics, University of Goettingen
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/265/GCF_000008265.1_ASM826v1
638,154,512
RS_GCF_000008265.1
Monoisolate
Complete Genome
Full
representative genome
Major
263,820
82,076
Picrophilus torridus DSM 9790
strain=DSM 9790
null
Archaea
Euryarchaeota
Thermoplasmata
Thermoplasmatales
Picrophilaceae
Picrophilus
Picrophilus torridus
true
Picrophilus torridus DSM 9790
Archaea
Euryarchaeota
0.99
1
0.8
0.9
1,545,895
1
35.97
1,545,895
1
1,599
485,076
92.441789
99.59
0
0
196
no
yes
yes
18
medium
582,790
GTATGTCGGTGGCGGTGTCATAACCTCGCCGTATCTTGATAAATTAACACCGTATAATATCTCGTAATCTGAAAGAGTCATCTCAAAGGGATTTTTAATAAAGTATCTCAGGCCATCTATCTCCTCTTTTGATAGCGTTATATATAATCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,123,650
ATCAATAGGAATTCAATGTTTATAAACTTTGGTAATTTAGATTGAAGGGATATGTAGTACATTAAAATGTCACTCAGAAATAATTTATATTCCCCAATCCATTAATATGAGGCATTGAAATGTCTAATTTTAAATGCTGCCCTCTAAATG
11
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Gemmatimonas aurantiaca T-27
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
247,130
CTCACACCGATGGGCACTGTCACATGCATCCGTCGCACAACGGTGGCCTCGTCGCTCTCCGCAGAAAAGAAAATCTCGTGCGACATGACGTGTGACACGCTGCCGTCATGCCGGGTACGGCGGTCCGCATTCATCAGTGATGACATCGGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
667,800
GCCTGTCCTGGCTGCAGCCCCAGGGTCCACACCCAGGCGCCCCCAGGGGCCAGGCCAGGGCAGCCGCATCTCCTACGTACCCCAACAGTGGGGCCCTTGAGGCACCGGGGACGGATGGGCAATGGTGTCCACACCTGACAGGCGGGGCCG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,189,050
TATTAAAAGGAAAAGACACAGATGAAAGCCAGCCAAGGGAAGACACGCGTGGGGCAGAGGCCAGAAGGGATCCACGCATGGAGTTTCCGGCCATCCTCTCCCATTGAGGTCAGGATACATTGCTTTCTTGGCAACAGTGAGTGACAGTGC
11
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
6,409,000
CAGATGTGGAAAAGTCTACTCTATCGAATGTTGATGCAGTTTTTCATCATCGAGAATATGAACGATTGCGCGAATGCTTGCAAGAAGCGTATGAGGCAAGTACACTACCTGAAGCACCTGCGGCGAAATCGGCTTTACATAATTTGCTGA
0no label
G000007745
ASM774v1
GCF_000007745.1
PRJNA224116
SAMN02603473
null
2004/09/17
Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/745/GCF_000007745.1_ASM774v1
637,000,156
RS_GCF_000007745.1
Monoisolate
Complete Genome
Full
representative genome
Major
221,988
157,673
Mannheimia succiniciproducens MBEL55E
strain=MBEL55E
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Basfia
[Mannheimia] succiniciproducens
true
Mannheimia succiniciproducens MBEL55E
Eubacteria
Proteobacteria
1
1
1
1
2,314,078
1
42.54
2,314,078
1
2,120
690,147
87.871627
100
0
0
329
yes
yes
yes
20
high
2,272,010
ATTCTCCGCACTTACGATAGTTAAATTAAATGTCGTCATATGTGTTCTCCTTCAATCTGGTAATCAGTTGAAGTGATTACATATTTTTCGCTTTTTCAACAACTTCTTCGATTGAACCTACCATATAGAACGCCTGTTCCGGAATATGGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,519,350
TCCGTGGCTCCTTCTTTTCTCTCTTAAATTTGTTTTCTATTGCAGCATAATAAATTACTACAACGTAGTAACTTTTGACAATGCCTTTACTTTTATTTCAGTTTTTCTGAGTTGGGAGTTTGGAGGCTGAAACCAAGAGGTCAGCTGGGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,479,650
GGGTCAAGGACACGGGGCCCTCCCCAGGCTCGCTGGCAGCCCATTGTGCTGGGCTGGAAGGTCTCCCAACCTGAGGACACCTAGGGGCAAGGGAGCCACTGGCCTGAGCCTGAGATCTCTGAGCGGGGGCAGGCAGCCCTCGCCATGCCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,173,400
TTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCAGGAAGGTGGAGCTTGCAGTGAGCCAAGATCGTGCAACAATGCGAGACTCCATCTCAAAAAAAAAAAAAAAGAAAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,750,650
ATTGTGATGACTTACAGAAATTTCCCAGCATTGCCCAGCAAGGGTGTGGACTTACAGTCCCGGTAGGCAAGTCTGGCAAAAACTCTGGACTTGGAAGTGAACGTGCCTTGGCCTGGGAAGTGTTTAAGGAGAATCTTTGGGGTTCTCCAC
11
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,717,400
GCCTTCGCATTGATGATGAGTTCTTTGAAGTAGAGTTTAACTGTATTTTTACCAGTTACCTCAGCTTTATCAAACAATGGAGCGGACACGCTGTTTGGCAAATTAACTTTTGTTTGCATTTCTGTCTTTGGATTTCCTGCTGTATCCAGT
0no label
G000007905
ASM790v1
GCF_000007905.1
PRJNA224116
SAMN02604097
null
2003/06/26
Univ. Wuerzburg
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1
637,000,131
RS_GCF_000007905.1
Monoisolate
Complete Genome
Full
representative genome
Major
235,279
32,025
Helicobacter hepaticus ATCC 51449
strain=ATCC 51449
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter hepaticus
true
Helicobacter hepaticus ATCC 51449
Eubacteria
Proteobacteria
1
1
0.9
1
1,799,146
1
35.93
1,799,146
1
1,802
571,920
93.657102
99.94
0.35
0
303
yes
yes
yes
20
high
858,520
ATGCGCTCAATAATCTCCCCTGAAATAGTGCTGCGCAATGAAAGCGTGGCATAAGCATTTGTTTGATACCACAATGAAATGCGTAACCCATTTGGCTCAATCATACAATAGCTTCGCACTTCAAGATTAGGATTGCGCAAAGAATACTTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,149,800
ATGGAGCAGCACCCACAGCCCAAGGTGAGCATCTGACAACCTGGAGCAGCACTCACACCCCCAGGCGAGCATCTGAACTCACAGAGCTGCACCCACACCCCCAGGCGAGCATCCGACAGCCTGGAGCAGCACCCTCACCCCCAGGTGAGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,408,600
CACGGCTGGGAGGAGGCCTCTTGGACACAGAACAAACTAACCAAACACTGACCTTAGAAAGTATCCCTTCGAAGAAGCCACAATTTGATTGGATTAGTTTGTAGAGCAACTTATGCCCAGGCTGTTGCTGAGAACAGCACAATAACCTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,928,600
CAGGATCCTGCTGCAGTGGGTAGACTTTCTGTGTGCTGTGCCATGGGCATCATGGAGCTTGCTTTGTTTTCAAAATATGAAAACGCATGATCATATAAACAGAATGTTCAAGTGCGTGTGTGCCTGTGGGATCAGATGAGCACCGCTGCG
11
G000007105
ASM710v1
GCF_000007105.1
PRJNA224116
SAMN02603579
null
2010/01/12
Macrogen Inc.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1
637,000,356
RS_GCF_000007105.1
Monoisolate
Complete Genome
Full
na
Major
264,203
542
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
strain=ZM4
null
Bacteria
Proteobacteria
Alphaproteobacteria
Sphingomonadales
Sphingomonadaceae
Zymomonas
Zymomonas mobilis
true
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 ZM4
Eubacteria
Proteobacteria
1
1
0.9
1
2,056,363
1
46.33
2,056,363
1
1,753
604,103
86.562441
100
0
0
320
yes
yes
yes
20
high
1,391,780
GGATGCGAGAGGCGGTATAAAAATTATCCCGCACGGAAAAATTCCGGTGCAGGATCAAAACAAAGCCCTATTATGTGTTATCAGCGGCCTTTTATTCAGGCCTTGGCATTACTAGCATAATTTTTACGCCATGCACGGGGGCTGACACCG
0no label
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Bacillus clausii KSM-K16
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
3,446,950
CAAACCTTGCGAAAACCGGGAGCCGATTTAGGTTGTTTTCTCGTGAAATAGGCTTCTTTCAATTATTTTATCATTCGCAACGTTTTTGGCAAAAATTTTCCCGTCAAGGGCTTGCTTCTCACGCTTTGTTGCGATAATCTAATCAAGTCG
0no label
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Neisseria gonorrhoeae FA 1090
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
328,380
GCAGACGGCATCGGCATCGGTAATGTCTAGGGATGCGGAATCCGTCGCAATGGTTTCCCAGTCTTCAGGAAGACGGTCGCGCAGGCAGTGTGCCAGTTGGCTTTTCGAGCCTGTCAATAGGATTCTCATGAGGTATTTCCTTTGGTGAAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,311,500
TCCTGCGATTGTCTTCTGGGCCTGGGGGCTTGACTGGCTCTGAGGCACTGAAGAAGCTGTCATCCATGGGGAGGGCCGGCCCATTTGCTGTGCCTGAATGACCTTCTGATCTGAGGCTTGTGCAGGCGCCTGCCTGGGCAGCTTTTATTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,521,000
GTGCTTTTTGCCAAACCTCACATTTGTTGGTTGCGTTTTTCACAACTCTTGTCCTCTGAAGATGCCTGCTCAGAGCCCATGCAGCGCCACGCTGGAGGGGCTGAGGATATGGGGGGCCCTGTTCTCAGAGCCCGTGAGGCACCGTGCTGG
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
2,222,220
GCCGCGGCGCAGCGCCACCAGCGCGTACGAGCCCAGCGACAGCAGCTCCAGGCCCAGGTACAGGGTCAGGAAGTTGTTGCCCGAGATCATCACGATCTGGCCCAGCAGCGTGAACAGCGCGAGGATGTAGAACTCGCCGTTGAACATCTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,557,850
ACTCATGGTGTTTATATTCTAATGGAGCAGAGAGACAATACGCAAATTGTATATTGTACAAAAATGCGACATGTTGTCAGATAAGTACTAAGAAGGAAAATATAGCAGAGTAAAAAGACAGAGAGTGATATGGCACAATTTCAGAGACAT
11
G000008605
ASM860v1
GCF_000008605.1
PRJNA224116
SAMN02604348
null
1999/12/22
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/605/GCF_000008605.1_ASM860v1
637,000,328
GB_GCA_000008605.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,276
160
Treponema pallidum subsp. pallidum str. Nichols
strain=Nichols
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema pallidum
true
Treponema pallidum subsp. pallidum str. Nichols ASM860v1
Eubacteria
Spirochaetes
0.99
1
1
1
1,138,011
1
52.78
1,138,011
1
1,009
357,124
92.473447
100
0
0
190
yes
yes
yes
20
high
104,650
CTCAAGTGGTACGAAGCGGCCATGCTTGTAGAAATGGGGTGTCTGTCGCAGGCGGCAGCGTTGCTGTCGACGTTGGGTGTTTCCATCGAGCGTGATCAGATTTCGGATCGTTTTCTAGTGATGGGCGCCGTGCGCAAGCACATGGAGGAG
0no label
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
7,333,300
TCGCAGCCGGGCAACGGGACGAGTGTTGTGGAGCAGGTCACTGAGCACGCCCCCTGACTGACAAACTGTCAGTTGTCTATGGTGATCAGGTGAGCGAGCAGACGCAGGAACGAGGCCGTACGGCAGCGCGGCGTGTCGTCGTCGTGGGCG
0no label
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
1,435,330
GATACTGGACAAGAGCATGCTGGATTTCTTCGCAAGGGGTTCCAAGGGCAAACAGGATCCCTTGGCCAACTCATCCTCGGCGAAAGCCTATGCGGAAAAGCTCAAACAGGAGTTCGGCGCCGGCGCTCACGACAAGGTGGCCGAGTTGCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,769,750
GCGCCTCCAACCCGCGCTGCCGCCGGGCCCGAGGCCGCGCCGAGCCCCGGAGCCTGCGCTGCCAGCCCCACGGAGCCTGGGGCTGGCGGCTTTGGAACTGCTCAGGAGGCGGCCAGGCTCCCTCCAGGGTCGCCCCGAGCGGCCGAGCTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,548,600
CCAAGTATGTGCTCCTGCTGCTTCTACCTGATGTCTCCCCATCTTGGGCTTTGAGGGGGGCTCATCCGGGGCATTCATATTTTCTGCCCGAGTTCGCTCCTGACCCAGGGCAGGTGGAAGCCAGCAGGTGAGGACCAGGGTGTCAGCCAG
11
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Treponema denticola ATCC 35405
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
2,263,300
TTTCATGTAAAAGAAATTTTAGATTCCAATAAAGAAAAAGCCTTTGAGTTGGTCGAAATGGGAAAAATCAGGGACGAAAAAACTTTTTTTGATTTTAAGCCTCTCGAAGATGCTAAACCGCTTGAGTCCAAATTCGTTTTAAACTCCAAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,413,950
GGGGCTCTTCGTGTAGGGGGAGATCAAATGGCTTCCGTCTCCAGGTGGCACAGCAAAGAGGGGGCACAAGGCTCGGCTGGGCACGACAGGGGAGCCACTGCCACCCCACACATGCCCAGCGGGACCCGGCTCTGCCTCCCACACCGCCTG
11
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,026,710
CAAAGCATTTTGAGCCCATTCCCGAAAAAGCTTCAGGAATATGCATCTCAATGGTTCATTGAGCACGATGTACAGCTTGTTTCCATGGCGAATGTCACTGGCATCGAGCAAGGGATCGTGTACAACCACAATCAGCCTGTTGAAAGTGAT
0no label
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Deferribacter desulfuricans SSM1
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
1,287,650
ATATAATAAAAGTTACACCATCATCAAAAGTAGTGGGTGATTTAGCACTTTTCTTAGTAAGAAACAATCTAACAATTAATGACTTGTACGAAAAAGGGGACACCCTATCCTTCCCTGATTCAGTTGTAAGTTTTTTTAAAGGTTATTTAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,128,250
CACCCGCTCGGCGCGGCTCTCGCGCAGCTGCCCCGCGAACATGGCGCGGAAGTAGGGGCTGGCGGCGGCCAGCACCGCACGGTGCGCCGGGAAGTCGCGCCCGCCCGCCGCCTCCAGGGTCACGTCCAGGAACTTGCGCTCGGCGCGCAG
11
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
1,840,280
TAAAGTGGCGCGAAAAGCGTTCCGGGTCGATAGTCGCGGAAGTGATAATGATTTTTAGGTCAGGACGCCGCGGCAGCAACTCTTTCAAATAGCCGAGCAGAAAATCGATATTCAGGCTGCGTTCGTGCGCTTCGTCAATAATGATGGTGT
0no label
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
5,358,990
GATGGCTCGAAAACAGCTGATGGGTATGGGTGAGTTGCGCGTTTAACACGGAAAACCGGGCGGAAACGCCCTCAACGCGCGTTGCATCAGGCCATTTTCAGCAAATAGCGCTGGGTGCCGGGCAAATTGCGACTCGCCGCCGCTGCGTAG
0no label
G000008925
ASM892v1
GCF_000008925.1
PRJNA58233
SAMN02604111
null
2006/03/30
University College Cork
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1
637,000,143
RS_GCF_000008925.1
Monoisolate
Complete Genome
Full
reference genome
Major
362,948
1,624
Lactobacillus salivarius UCC118
strain=UCC118
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus salivarius
true
Lactobacillus salivarius UCC118
Eubacteria
Firmicutes
1
0.986
1
1
2,133,977
4
33.04
1,827,111
1
2,106
630,045
86.976336
99.48
0.52
0
292
yes
yes
yes
20
high
1,343,680
CAACTAGATATAGTAATCCGTAACCAGTTGCTTCAGTACGAGCTAAAGAACCACCAAAGGTCAGGCCCTTTCCAGTTAGAACACCTTCATATGTAGACTTTAGACGCTTATATTGACCAAATAAGTAACCAACTTCGCGAGCACCTGTTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,683,050
AGGCAGAGTGAATGATGCAAAGAGACAGCCTCTGATAACACCACTGGGTCCCACAACCCCGAAGCCCCTTGCCTCTTAGTTCTCAGGGCCCTGATCCCACACATCCCTCTACTGCCTAGGCCCCGGAGCTGGGCTTCTGCTCCTGCAACA
11
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Deinococcus radiodurans R1 ASM856v1
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
445,120
CACGGCGCTTACGGGCATGTGGATCACCTCCAGATGCACCGCGCGACCGTCGCCGCCTTTTTCAGCACCGGGCACCTGCCCTCCGGCGGCCCGCAGCGCCTGTACTACACCGCCATGACCCACCAGGCCGCTGCCCAGATTTCGCGCCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
121,800
ATATCCTTTCACAAGTATCTAGAATATTCAAAGACTAATAATATTATATAATTATTTATAATAATTGTATTACAAAAATAAAACTTGATGACCTTTATAAAAATACTAGAAGAAAAAGGGAAAATTACATAAGGTACAGAACATACAAAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,487,150
ATCTATTCTTTCTTCCTTCCTTCCATCCATTCATCCATCATCCATCAATCATGCATTCATCTATCTTTTTCATCCTTGCTTCCTTCCATCTATTCACCCATCATCCATCAATCATTCATTCGTCTATCTTTTCTTCCATCCATCCATCCG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,529,900
ATACAGAGAGGGCTGCAGACATTTCAGCCTCGAGGTTGGAGCAGAAGCAGGGCTGGGGCCCACCAGGGTCCAGACCCCTAGTAAAGAGGTCACTTCCCACAAAAGAAGGTTGTTTGTCTGCTTCTCATAGAACCTGCTCTGGTTAGAGGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,071,700
GGCAGGCAGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAGAAAAATTAGCCAGGCATGGTGGCACGTGCCTGTAATCCAGCTACTCGTGAGGCAGAGGCAGGAGAATTGC
11
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Deinococcus radiodurans R1 ASM856v1
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
221,910
GCGGTCGCCGTCGCTGACGCACATGCCCGCCGCTTCCTGCCCCCGGTGTTGTAGGGCGAACAGGCCCAGGTAGGTCAGCCACGCGAGGTCGTTGGGCTGCGCAGAGTAGATGCCGAAAACGCCGCATTCCTCGCGGGGCTTGTCGAAATT
0no label
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
3,258,190
GAGGCCCCACCTGAGATTGAGCTGCCACTACTGGGTGATTTGATCATTTGTCGTCAGGTAGTTGAACAAGAAGCGGTTGAGCAAGAGAAAGCACTATTGGCTCATTGGGCGCATATGGTTGTTCACGGCAGTCTGCATCTGCTAGGGTAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,641,000
GGGAAGGTGCAGAGTGTTTCAAACCAGGGAAACAAGAGTCAGGGGAGAGTACAGACAAGGAGGAAAATGAAAGAATATGAAGGCAGGAATGGCAAAAATAAAGCTGGATCTGGTTTCTTCAATATGGTAGCCTCTAGTCCCCTGTGGCTA
11
G000007325
ASM732v1
GCF_000007325.1
PRJNA57885
SAMN02603417
null
2002/04/09
Integrated Genomics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/325/GCF_000007325.1_ASM732v1
637,000,117
RS_GCF_000007325.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,304
851
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
strain=ATCC 25586
null
Bacteria
Fusobacteria
Fusobacteriia
Fusobacteriales
Fusobacteriaceae
Fusobacterium
Fusobacterium nucleatum
true
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Eubacteria
Bacteria
1
1
1
1
2,174,500
1
27.15
2,174,500
1
2,022
670,780
90.88917
99.95
0
0
297
yes
yes
yes
20
high
605,020
CCTTTTTCTGTGCCAACATATCTTTTAAAATATCATCAAAATATATTATTTCAAAAACAGGTATTCTTCCTATATAGCCAGTTCCCATACATTTCTCACAACCATCAGAAGTATAGAACTTTACATTTTTATATTTTTCTTCTGAAAGAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
781,500
GGGGCGTCCGCGCTTACTGTTCCGGGGCTCGCGGGGCTGGAGGCCTTCCCGACCCGACCCCAGCAGGAAGCGCGGAGGCCACTAGAGGGCGGCCCAGGATGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTG
11