#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Sterne ASM816v1
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
3,563,690
TAGAGGACTTACTAAAAAAAGAACCTACAACAGCGAACAACATGAAACATAACCGTATACAGCCTACACTACAAGGAGATTATGGAGATTTGAATACAGAAATTCCTCCCTTATATATTGAAGGACTTAAAGAATTTTTGTTACGCTTAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,898,250
TCTCCACAGCCTGCTTTGCACCAGTGGGGTGACCCTGACAATTGGGCAAAGTGATGACTCCCTGCTTCCATCACATGAGCTCCCCTTAAAATCAGGACCTAGACTGAACTAGGTGTGCTTACCACCTAGAGGCAGGAGCTGAAGGAGGAG
11
G000007925
ASM792v1
GCF_000007925.1
PRJNA57995
SAMN02603142
null
2003/07/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/925/GCF_000007925.1_ASM792v1
637,000,213
RS_GCF_000007925.1
Monoisolate
Complete Genome
Full
reference genome
Major
167,539
1,219
Prochlorococcus marinus subsp. marinus str. CCMP1375
strain=CCMP1375; SS120
null
Bacteria
Cyanobacteria
null
Synechococcales
Prochloraceae
Prochlorococcus
Prochlorococcus marinus
true
Prochlorococcus marinus subsp. marinus str. CCMP1375
Eubacteria
Cyanobacteria
1
1
0.9
1
1,751,080
1
36.44
1,751,080
1
1,908
529,797
89.120257
100
0
0
312
yes
yes
yes
20
high
1,701,310
ATATTTCTCTGGGATGAAGAATCTCAACTTTATTTGCTCGAGTCAGCGCTTGGATATCTTGAGTCGCCTTCTTTAACAGATTTAAGAGATTTTGATTCTTAGTAACAAAGCGAACAGGTGCTCTTTGAGATGGCTTTAAACCTGCCTCTG
0no label
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Bacillus cereus ATCC 14579
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
3,003,780
ATCTCTCATCCTCAAAGTGTACATATACGTAATCACTCAATCGAACCTTCTGACGAACAGCCGCAAGAATCGCATATGAAAACTCACGATTTTGAATTGTACGTGCTAACGCATCGAGCGCATCTGCTGCATGTGCAGTAGAGTGTGCCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,097,300
GGGGGCTCTTGATTCAGAACCAAGTGAAATCAGATCAAAATTCTTACTCTATAAGCCAATATAGCCAACCAAGTTTCTCCAGAAATTTGGGATGAAGTGGCTAACATGTGTATACTGTATGGCTTAAAAAGATACTTTCTGAAGAAACTT
11
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
3,166,410
TCGAGTGTCATGGTAGAGCACATCACGCCCATGATGTTTTCAGGATTAATTGGCATCTTTATTGGCGATACCGCGCTATTTGCTTGCTTAAATCGTATGGGACCTCGCCAAGCGGGCTTGCTCTTCTCTTGCCATGCCGTCTTTTCCGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,039,100
TAAAAAGGTTAATTTTTTTTTTTAAAGACTGGTTCTGTCACCAGGCTGGAGTGCAATGGTGTGATCGTGGCTCAGTGCTGCTTCAACCGCCTAGGCTCAAGCAATCCTCCCACTTCAGCCTCCTGAGTGGCTGGGACTACAGACATGCAT
11
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
3,773,120
ACTTCGATGTTCAGCGCTTCAAGTTCTTCGTTCTCTTTACCGTCGAATTCTGCGTGCAATTGGTCAGAGGTATGATCGCGACGGAAATCGTTCGGGAAGGCAATTCCCTGCTCACGCAGGTTCGCCAGCTTCTCACGACGCGTTTTCAGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,400,400
AGCAGACAGCTCCAGATTCAGGTGGATTTCTGGGAAATGATGTGGAGGGGGAACTTTCCAGATTGTTAAATCAGGACAAGAGGAAGGTTTTGAAAGGTTCTGCAGGAAGCAGTTTTCTCGAGCGGGCAGTGTCAGCACACACTGGGCTTT
11
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Haemophilus ducreyi 35000HP
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
1,191,450
AGAAGTCATTCAATTTGCACCGCTTCACAATCCTGCGCATTTAATTGGTATTCAAGAAGCATTTCGTATTTTCCCTGAATTAAAAGATAGAAACGTTGCAGTATTTGATACAGCATTCCACACAACTATGCCAGAACAAGCATATTTATA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,532,550
TCACCCTGTGTGCGGTGCAGTGGCACAGTCTTGGCTCACTGCAGCCTCGACCTCCCGGCCTCAAGTGATCTTCCCACCTCAGCCTCACGAATACCTGGGACTACAGGTGTGCCACCACATGTGGCTAATTTTTGTAGTTTTTGTAGAGAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,467,950
TTGCCTCCTGATCTGATGCATGAGGCCAAGTGAAGCAGCTGCCAAAAGCCTGGTGCATTTTGGCTCTCCCAGCATTACGAATGTGTGATGAAGGCAGCAGGGCCACAGGGAGAGCAGATCCTCCAGTCAAAGGCAACATGAGGAAGCCAC
11
G000008805
ASM880v1
GCF_000008805.1
PRJNA57817
SAMN02603997
null
2005/05/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/805/GCF_000008805.1_ASM880v1
637,000,189
RS_GCF_000008805.1
Monoisolate
Complete Genome
Full
reference genome
Major
122,586
487
Neisseria meningitidis MC58
strain=MC58
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria meningitidis
true
Neisseria meningitidis MC58
Eubacteria
Proteobacteria
1
1
0.9
1
2,272,360
1
51.53
2,272,360
1
2,107
632,964
82.059313
99.75
1.9
80
322
yes
yes
yes
20
high
1,424,540
CGACGGAGCTGCTGGAAATCGCCTTCATCAGCATTTCGGTGGTATTGGCGTTTACCAGACCGGTAGTGATGGCAAGCTTTTTAATCCAGAGTTTTTCCAGTTTGAAATCAACGGATTGACCATGTACACCAACCACAGCGATATGGCCGC
0no label
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Bacteroides fragilis YCH46
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
3,008,070
GGACTGGCCGACTTCTACAACAGTACCAAAAAAGATTATTTCTCGCGCTCTGCCAATAGTACCATTACAGCCAAAATCACTTATCTGTTTGATATAAAGAAGTAGAAAAGCATATATACAAAATCGCCACAAAGGATTTAGAGTTTATAG
0no label
G000007905
ASM790v1
GCF_000007905.1
PRJNA224116
SAMN02604097
null
2003/06/26
Univ. Wuerzburg
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1
637,000,131
RS_GCF_000007905.1
Monoisolate
Complete Genome
Full
representative genome
Major
235,279
32,025
Helicobacter hepaticus ATCC 51449
strain=ATCC 51449
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter hepaticus
true
Helicobacter hepaticus ATCC 51449
Eubacteria
Proteobacteria
1
1
0.9
1
1,799,146
1
35.93
1,799,146
1
1,802
571,920
93.657102
99.94
0.35
0
303
yes
yes
yes
20
high
1,604,330
TGAAGCTTGCAAGCTTTTACCAAAGGATACATTTGATATTATCTATCAGGACGCCTTTAGTCCAAAGAAGAATCCAACTTTATGGAATACAGAGTATTTTTCACTCCTTGCTTCTCTTTTGCACCCACAAGGCATTATTACAACTTATTC
0no label
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Treponema denticola ATCC 35405
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
2,135,770
AATCCTCGATTCAAAGCGGGGAGATATTGCCCGCTCCAGTCTTAACTATGCTATCGAAGCCTTCGACGGCTGGAAGGCGGATGCGGTAACGGTCAGTCCCTACATGGGAAGCGATTCTATTCTTCCCTTTATTTCGGAAAAGTATTTGGA
0no label
G000009945
ASM994v1
GCF_000009945.1
PRJNA224116
SAMD00061108
null
2006/03/09
Japanese Consortium/Yamaguchi Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/945/GCF_000009945.1_ASM994v1
637,000,067
RS_GCF_000009945.1
Monoisolate
Complete Genome
Full
representative genome
Major
264,202
83,556
Chlamydia felis Fe/C-56
strain=Fe/C-56
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia felis
true
Chlamydia felis Fe/C-56
Eubacteria
Chlamydiae
1
0.992
1
1
1,173,791
2
39.34
1,166,239
1
994
361,027
90.6353
99.49
0
0
223
yes
yes
yes
20
high
38,350
TTTTAATTCGCCATCATGAGGATTCTTACTTAATGAGAAAACTATTTTTCCAGAACTAATTCCAGGAACTCTGGTAAGGGCGTAGTGGATCTTATCTGCTACCTCATGTATTTTTTGTCGGTTGATAGCGATGTCTTCCGTAAGCACTAA
0no label
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
4,001,790
TAGCCCAGCTTCTCCGCCAGCTGCTGCAGATTAGGCTGGATGTGCGGCCGCCGCGCCAGCTCGCGCTCGAACAGCGCCTTGCCGGTCTCGCGCACGGTGTCGGCGTTTTGCAGCCGGATGTACTGGCGGATCTTGGAGATGGCGCGGTGG
0no label
G000010125
ASM1012v1
GCF_000010125.1
PRJNA224116
SAMD00061076
null
2005/08/12
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
637,000,284
RS_GCF_000010125.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,451
29,385
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
strain=ATCC 15305
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus saprophyticus
true
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
Eubacteria
Firmicutes
1
0.992
1
1
2,577,899
3
33.19
2,516,575
1
2,502
730,892
83.519176
99.44
0
0
348
yes
yes
yes
20
high
1,378,520
GATGCCATACAGAAATCATCAGAATCACTTAAAACAGTACAATTCGACAGTATTTAATACCTCAAAATTTTCTATGGTAGTATCGTTCTTACGTGACGATGCTACCATTTTTTATTCATCGATGTTGGTTTAATATATTTAAAACGTTGC
0no label
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Bacteroides thetaiotaomicron VPI-5482
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
5,623,150
CAAGATGTAACCGGATGTTGGAAAATGTCGGTAAAGTACCCGATATGACGGAAGCCGACAGAAGACGCTATATAGGATATGTACACTTTATGCGCGGTTATGCCTACTACCATTTACTGATGAACTATGGTCCGTTGCTGATTGTGGGGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,168,550
CTGACAGCCTGAAACAGCACCCACACACGCAGGTGAGCGTCCGACAGCCTGGAGCAGCACCCACACCCCCAGGCGATCATCTGACAGCCTGGAACAGCACCCACACACCCAGGTGAGCATCTGATATCCTGGAACAGCACCCACACCCCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,308,200
TCTTGCCTCCTGCCCGGGTTCCTGAGGACGCAGCCACAGGGCCATGCCCAGAGCCTGCAGGGCAGTCAACACCCGGGGGCCTGGAGGAGTGGGGAGTGTGAGCGCCTCTCCTTTTCTGCTGCACAAGAGAGGCCCCGGGCGCAGGTTGCT
11
G000007225
ASM722v1
GCA_000007225.1
PRJNA172
SAMN02604075
null
2002/01/24
UCLA/CalTech
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/225/GCA_000007225.1_ASM722v1
638,154,513
GB_GCA_000007225.1
Monoisolate
Complete Genome
Full
na
Major
178,306
13,773
Pyrobaculum aerophilum str. IM2
strain=IM2
null
Archaea
Crenarchaeota
Thermoprotei
Thermoproteales
Thermoproteaceae
Pyrobaculum
Pyrobaculum aerophilum
true
Pyrobaculum aerophilum str. IM2
Archaea
Crenarchaeota
1
1
0.8
0.6
2,222,430
1
51.36
2,222,430
1
2,631
675,358
89.497712
100
0.74
0
176
no
yes
yes
16
medium
2,006,030
CATCGTGGCATCACAGGGCTATGACCCAGATCCCAAGGCGTTCCCCACAGCTGTGCCAGAGGCAATAAGAAAGCTATCGGGCGCATTAGGCCAGCCTGGATCTGACGCGGCAATTATCTTTGTTACCTTTGAAGACGACGGTATAGCGGC
0no label
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
2,978,690
AAGTGATTGAGGAACGCCGTGAGTTGAATGCAATATACGATTGAGCTTTTTATCTACCAAAGTGATGCCCCCAAGATAGATAGATCTAATCCGCATTAGACAGTAGGTGGACTCGGCACAAGAGAGTACCCAAGGGCGGCAAAGAGAACC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,746,300
CTCCAGCCTGGGTGACAGGGCAAGACTTCATTTCAAAGAAAAAAAAATTTTTCTGCTCGTTTTTTTAAATCACTTTCTGGATCACCCGTTATTAAGTAGTTATTTTATTTTTTGGATCTCTCATCCTTGTCTCTTAATTTTTCTCTTTCT
11
G000008025
ASM802v1
GCF_000008025.1
PRJNA224116
SAMN02604000
null
2004/02/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/025/GCF_000008025.1_ASM802v1
637,000,339
RS_GCF_000008025.1
Monoisolate
Complete Genome
Full
representative genome
Major
163,164
163,164
Wolbachia endosymbiont of Drosophila melanogaster
strain=wMel
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Anaplasmataceae
Wolbachia
Wolbachia endosymbiont of Drosophila melanogaster
true
Wolbachia endosymbiont of Drosophila melanogaster wMel
Eubacteria
Proteobacteria
0.96
1
0.9
1
1,267,782
1
35.23
1,267,782
1
1,276
363,312
84.420744
99.79
0
0
229
yes
yes
yes
20
high
688,220
CTAGATATTCATGCCATATGTGATTGCAGTTCGTACATTTTACCTTTCTTCCAGACGCGCCAATTTGCTTAGGAGATACTAAGTAAGTTTTAGTACAACTATTACATTGTATTTTCATAGCACTTACATATAAGTAGTAACAAGCCCAAA
0no label
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,013,220
AAGCCGCACGTCGAGAATGGCATCGACCTTGTCGATCAAGGAGGCGGAAAGCGGAATGCTCGCTTCCTTCTCGACCGCCAGCAACGTGTCGCGCCAGGTCATGCCGGAAAAGCGTTCGGACATTTCCTCGATGCTGATCGGATAGCCCGC
0no label
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Yersinia pestis CO92 ASM906v1
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
3,714,490
CTTTATGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGAAAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATAAAATGGGTGAGCAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,992,900
TGAGAGCCTCTCTCCCTCTTTGTCATTGTCCTCCTTGCTGTTTTCACCTCCACAACCTCCTGCTGCTATTGGATCTTAACGGGGATTTTGCTGTGAATTCCATTTTCCTCAGCTGCCATGCAAACAGTAAATAAAATTCATTGTATTTTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,948,700
TGGCACTAATGGAGATGTCATTAACAACAGTGGCAGGGGCTCAGGGGCATCTGCTCAGCCCACTGGAATAGCAATAAAGCATCACCTAGCCCTGGCCCACAAAATCACAAAACCATGTGCTAGATGAGCTCGTCCATGACCAAGGTGGCC
11
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Gemmatimonas aurantiaca T-27
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
613,210
GTGGCATGCTCGCTGCCGACCAGCAGCAGGTTGCGACCCGCGAACCCCGCGCTGTTCTGGTTGAACGCATACTGAAACGACATGCCCAGCGTGGGCAGGTACGACGTCCGCTGCGATTGTTTGGCTGCCTTGGCCACTGCCACGTTGGAC
0no label
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Streptococcus agalactiae 2603V/R
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
1,907,100
AGCTGCCTTTTGAGCAGGAATTTCTTTCCCAGTAATACGACGAGCTGCCTCTAACATCTGAAGGTTAGAAAAACCTGTCGAAGATCCGAGATTAAACACGTTTGATTCATTCCCTTGGCGAAGGTAATCAACTGCTAATATATGAGCATC
0no label
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
2,042,820
AGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCGCTGTTCATTGCCTGCGACGTGACCCGCGACGCCGAGGTGCGCCAGTTGCATGAGCGCCTGATGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,104,150
CGTTACTTGCAGTTCTACTGGCCCATCCCGTAAGGGCCATAGATCCAGGGCCGGTTGCACTGCTTGTTTAGCCTGTTAAAAGCCGTGCTCTCTTTCTCTCCCCAGCGAAAGTCGTAGCGTTTTCTAGTGACAGCATGCAGAGGTTGTAAA
11
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
487,630
TTGGCGGAAGTTCGCGATACGAGTGCCGTGCTCTACGTAGTCACCGTGAGAAAAGTTCAGGCGCATTACGTTCATACCTGAGTTGACTAGTTCAGTCAGTTTCTCTACAGACTCAGTTTTTGGGCCAATCGTACATACGATTTTGGTCTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,559,500
GAGATGGGGAAGGGAGGAGGGGGAGGAGGAGGAGGAAGGAGAGGCAGAGAGAGATGAGCAGCTCTGCAGCAGGAAGTCAAGATGATTGGGAGATGGGGTCTCATTCTAGGGTTTGAGCTGTCTACTTGGAGGGAGGAACGCTGTGGCTTG
11
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Methylococcus capsulatus str. Bath
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
1,918,410
TGCTGGCCATGCTCGACAACGGCGCCGCCATCGAAGTCCTGCGTGCCTGCGGTGGCAATCTCGACCTGCTCCGCAACGAACTGAACGAATTCCTGGATGAAACCACGCCGCTGATCCCTGCCGGCGTCAAGCGTGATACCCAGCCGACGC
0no label
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Xylella fastidiosa 9a5c
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
860,340
GCCCCCAGCGGCCGGCAACAGCAGCTCCAGCAGTTGCGCCAGTCCCTCACCCCACATTAAGGAGCCTTCTCCATGCAACGACGTCCCTTACTTGGTGTATCCCTGCTCGCCGCCAGCCTCTTGCTGGCTGGGTGCAGCAGCGGCCCCCCA
0no label
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Clostridium acetobutylicum ATCC 824
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
3,080,610
TTTTCGTAAAGTCTCTGCATTATTGATAAAGTTTCTTTTGCTGAAAATCCAAAGAATCTATTTGCATCTCTTTGAAGTTCAGTTAAATCGTATAATGCTGGAGAATATTTTTTCTTTTTACTTTCACTAACATCTACAATTTTTCCTTTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,478,900
CCTGCAGGTGTCAGAACAAATCCATGTAGAAATGCAGACGCCCACACCGGCTTGAATGGCATAAAGGCACACATTGGAATGTGGCTCATGAGCTGGGACCCAGGATCAACCACTGGTTTAAGGAGAGGACCGTGAAATGTCCAAACATGG
11
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
1,369,940
CCATCCGCGCATCATCGCCGCACTGTTGGTGCGCGATCACGACCGCGGCCGCGACGATTGCAGTGTGTTTGTCATGCGCTTGGGAGGCATGTCATGAGTCACGCAAATGAGGTTCCCGCCATCGACGCGATGGCTGAACTGGAGAGCTTG
0no label
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
3,602,170
GCAAAAGGCATTACATACGAACAAGATAATAGAGTGACAGAGTCTTTTCTGCCTTTTAAATCTTTTTATTGTTCACCGGTGTGCACGACAGTTGAACTCATCTCACAAAATAATTGTTTTGCTATGGGTATCCGCTACCTTCTGGAAAAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,634,400
AATGATTCATATGGATGGATTTTAAAAACATGCCCAGTGAAAGAAGCCAGGGTATCTACTGTATGATTCTATTTATATGAAACTCTAGGAAAGACAAAGTGAATCTAGGGCCGGGTGTGGTGGCTCACGTCTGTAATCCCACCACTTTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,401,250
TTAAGCCCACTGCCCTGCAGCTGACTCAAGCCATCATCATGTATGTACGTGTATAAGAAAGGACACTGGCCGGGCATGGTGGCTCGCGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGTATCACGAGGTCAGGAGTTTGAGAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,713,450
TGTTCTGGCTGGCGAAACTTCTGCAAACAACGAATGCTTCTTTTCATCAGCCTATTCTGCGTTGGTTGGTAGGATGTCAGTCTATAACCACATCAATTTCAGGTAATAACAAGTGTGTGAGCTTTCTGAAGCTTTTTGTTTACTTATTTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,708,950
TGAGCCAGGGACACCCGTGACCCTGCCTGGGGCGGTCCTCCCCAGCCTTGTGAGCCAGGGCAGAGGTGCAGGTTGGGTGGCTGACCTGGTGGGGGGTAAGAACATCCACGGAGAAGTGTGACGAGTGTGCGACCAGAGTGTGGACCCAGC
11
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Synechocystis sp. PCC 6803 ASM972v1
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
776,620
TTGGCCGGGGTAGAGTTGGCCTGGGATGGGGCGGAATCCATTTTGGTACTGGGGGCCGGTTGACCATTAGCCTGGATTTTTTTCACCTCCATGGCAGAAATCTCCTTGACCACTTCCCCTCCCTGGGAGTTGAGAGTTTTAGGAAAACTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,324,650
ATGGGATGGAATATTACCACCAGAATAATTGTGTCCAAGGATCATTACATTGACCTTTGAGATGATGAACATGGGCAGTTTGGGAACTATGAAAAGTAGTAAGGGGAAGAGATAAAGCCGATTCTCACTGTTATACCTGAGGTTCACGGT
11
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
4,462,120
CACGGCAAGATCGTCGACCGGGTGTTGCAGTCCCCGCTGGTGACCGAGGCGATGGTGCTGTCGACATGCAACCGGGTCGAGGTCTACGCGGTGGTGGACGCGTTCCACGGCGGGTTGGCCGTGATCGGGCAGGTGCTGTCGGACCACTCC
0no label
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
3,103,490
CGCCCTCCTTGGCCTCGGCATCAATCAGGGCGCCTATACGTCGGAAGTGGTGCGCGCGGGCCTGCTGGCGGTGGACACTGGCCAGTATGAAGCGGCGAAAGCCATCGGCATGACGCGCCTTCTGGCGCTGCGCCGCATCGTGCTGCCGCA
0no label
G000007085
ASM708v1
GCF_000007085.1
PRJNA224116
SAMN02603009
null
2002/05/14
Beijing Center.HGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
637,000,318
RS_GCF_000007085.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,068
911,092
Caldanaerobacter subterraneus subsp. tengcongensis MB4
strain=MB4
null
Bacteria
Firmicutes
Clostridia
Thermoanaerobacterales
Thermoanaerobacteraceae
Caldanaerobacter
Caldanaerobacter subterraneus
true
Caldanaerobacter subterraneus subsp. tengcongensis MB4
Eubacteria
Firmicutes
1
1
1
1
2,689,445
1
37.57
2,689,445
1
2,674
812,453
88.995016
99.04
0.6
0
329
yes
yes
yes
20
high
286,520
AATGGAAAAAATTATATCACAAATAAAAGGCGAAAACTTGAAAAAATTTAGGTGGTTTCAGGAAAAAGCCCATGAAATTTTAAACCTGTTTGTCAAGGATTATCTTATTGTTTATGAGAGAAAAGAAGAGATATTGGCAGTGATAATTTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,824,100
AGTCACTGTCAGAGGCTGCAAGTCATGCAGGGGCTTCTGAGCCTGCAGGTGAGGACCAGCCCAGACCAGGGTGAAGTCTCAGAGAGACTCTCCGTGGACCCTTCACCAAATGGCCTCCAAGGCCAAGGCCCTTGATCACAAGTGTGTCCC
11
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Deferribacter desulfuricans SSM1
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
1,436,240
CTGCGAAGCAATCTGAGATGATTAAGCAATTATTATTGTGCAACACCCTAAAAATATATTACCCTAATCTAACAAAAGCATTCATTTTCTTTTCATAACCAATAGTTGATGATGGTCCATGCCCTGGATACACTGTGACATCATCATCTA
0no label
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Rothia mucilaginosa DY-18
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
1,689,090
CATGCCGTTCTCGGCAACCGCCACGAAGGTCTGCGCCACGAAGCGCTGGTCCTCCTCGAAGGCAGCCATGGCGGCTTTCTGACCTGCGGCGTCGCCGTCGAAGGTGAAGATGATTTCGCCGCCGGAGCCGTCGTCGGTAATCATGCGGCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,968,150
GAAAGGGCCTTTGTTTTGTTCACTATTATATCCCCAGCACCTAGAACAGCACTTGACAACATATAGCAGGTGCTTGACAACCACTGGTTCAGTACAAGAATGTATCTGGAGATGATTGGGCTTAGTGTTCCTCCAAGGCTATTTGACCTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,112,500
TTCCTGCTGAGCCCTTTACGTGGGGTGCTGTCAGGCACCTCCCTCACAGTAGCTGTCAGGGAGCCTGCCTTCCCTGCCTTCCCTGCCTTTCCAGTGCCCCCTTATCTAGGCAGGGCTACTGTCTGCAGCCTCACCTCCAAGGTCCTTATT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,417,400
AATGAACATATGTGCACAATGCACACACTGCACACACATACACATGCACACACATGCATTCATACTTGCAGTCTACACACATGCATATGTACACATGCACACATACACTATGCACACACAAACATACATGCACATCTGCACACAGCACAT
11
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Bacteroides thetaiotaomicron VPI-5482
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
3,179,410
ACAAGGAATCGAAAGCATGTGACAGACCTATGCTTGCAGGCGATTTCCGTTTTGTGGATGTCGTACCTACGATCGCCATGATCAAACCGGATACGATCATCAATGCCCAAAACAATGAGAAAGTGCCCGTCATGTATACGCAAATGGCGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,658,200
GAGATGACTGACTGCCTGAATCACATTTCTAATGCTTGTCTAACTGTTTCTCGTTTGATTCTTCTCTTATTGGAGTGTTGAGAGCTACGACGAGCCAAAGCTCCCTTTAGGGCAGCAAACCCCAGGAAAAACATAAAACAGTTCTCGGCC
11
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Clostridium acetobutylicum ATCC 824
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
1,969,110
CTAAAAGAAAAAAGTACTACAACAAGAAAAATACTTAAGGAATATTCCATAGATTTAATCGACAAAATGCTTACTATAGTTACACCATCAATATTAATTGCATACTGTTTATACAGCTTTAGTTCCGTGCAGGGTAAGAGTATGATGATT
0no label
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Sulfolobus solfataricus P2
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
1,589,900
GGATTCAGACATCCATTGCGAATTCACTTTATTTCAAAAATTTCTACGAAATTAACTAAATGAAGACAACTAATTAGTAGAGAAACACGATTATCAATACTAACATTTTTACAACGTATTATTTACAAATTACAATTCTCAAAGGAGACT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,535,500
GCTGTTGCCCCGAGAGCAAGCATTCATCCCAGTTTACCAGGGGCTTTTCCAATGTTAGCAGCAAGAGTTCCATGTCCCAGGCACTCCTTCAGTCCTAGTTGTTCCAATCCTAAGAGGATGAGCAGAGGCCAGGGGCGTTTAGGGACAATT
11
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
5,592,340
AATATCTGGCCAGTGCCGACAAACGTAACAGCAGCTACTTGCAAGCCAAGGTACGCGAGCAGCATGACGGACTGGTGATCATCGAGTTGTCCAGCTACCTGGACAGCGGTGGCGCCCACGGCATGCCCGGGCGCGGCTTCATCAACTATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,292,500
GTATGGTAATTCTATGTTTATTTCCTTGAAGAACCTCCATACTGTTTTTTCCAGCAGTGGTACCATTTTGCATCCCCATCAGTGATGCACGAAGCTTCCAATTTCTCCACATCCTCGCCAAGACTTGCTATTCTCTCTCTTTTTTTTGAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,488,750
CACCATCATTGTAAGAATCACATGAAATATACCAAAGTGCTTTGTAAACTAACAAAAAATTTATTTCTTGAAATAAATGTGGCCAGGTGCAGTGGCTCACAACTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGG
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
3,099,460
AGTGTGGACGCCTAACTAGGATGCACGCTCTTAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCCTACCGTGGTAATCGCCCTCCTTGCGGTTAGGCTAACTACTTCTGGTAAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,369,850
GCCGGCCCTGCCAGCTGGACCTCCACCCAGGCTGCCCTGACACTCCAGGAGCAGGTTCCGGCCCCCATGGGGGAGCAGCATCGCCCTGTGGGGCGGAAAGTTGAGGGCGTCCACCCCACAGGAGGCAGGAGGGCGTGGCTGTGCCCACGG
11
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Finegoldia magna ATCC 29328
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
1,660,100
TAAGTCTAATGTCGTCTGGTTCAATCCCCAATACACCAGCTAACAAAGCTCTGTCAGTACCGTGACCCTTGTAAGTTTTTGCAAATGATCCGTGAAGATCAAACTCAACTTTTTTGAACTTATTTCCAGCAATCATAAGAGCAGTCTTTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,301,800
GTGGTGACAGGCTGACATAAACCAACCCAATAAGGAGCGCCAGCCCGAGTGAGCCCCACTCCCTCCGGCAGCAACTGAGAAACTCGGAAGCTGGGGGAGAGCCTTTGGCTTCAGGAGGGTTCACATTGAGGCTGAACTCCCCTGTGCAGC
11
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Deferribacter desulfuricans SSM1
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
317,070
GTTACAAGTCCAGCTGGTCGACCTCTGTAAATAGTAGTTCTTCCCTCTAGCAGTACCCATCGCTTTTTTCCGTCCTTCCTTTTGACAAGTACATTGTATTTATGGTGGCTATCTAAACCACGTTGTCTTTCTAAACCTCTTTTTTTGACT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,281,100
GTCATGCTGAGGGGAAAGGCCACTCCTCAAGCCCTGCAGCCCTGCAGCCCTCCCCTCTATGGTGTGCTAGGGCCCCTTTTGGGCTGCGGCTGTGCGGGGCTGCATCAAGGGGCAAGGCTAGAGGTGTATCCAGGTGAAGCCCATGTGAGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,103,150
ATCCTCACCTCCAGGTGAGCATCCGACAGCCTGGAGCAGCACCCACACCCCCAGGTGAGCATCTGACAGCCTGGAATAGCAACCACACCCCCAGGCGAGCATCTGACAGCCGGGAACAGCACCCTGCACCCCCGGGTGAGGATCAGACAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,844,750
GCCCTGACCAGTCTCCCTTGGGAGACCCAATTCAACTTCCTGGTCATTTTGTTTGGCTGTGCCTGGAGCTCTTATCTGTCTTCTTGGGGGTTTGGCTGTGGGTCTGCCCGAGGTCCTGGGCTTCTGGCTGGGGTAGTGTTGCCTGTTGCC
11
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Bacteroides fragilis YCH46
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
2,097,550
TTAAGTAATGTATTATTGATCAATGTATTACATCCGTACACTTTGTCTTTGTTTCTGAAAATAAAAAAACTCAGAAACATTTTCAGATGGGATATGAAGTAACTTACTGTATTATAAATGCTTATAATATTTATGAAGTCATTCTCCCTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
930,000
GCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAAGGCGAGACC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,179,250
ATGATCCATGGAGGTCTGCTTTCTCTCCCAGAACCCCATGACCTTGGGCCTCTACTTCTCCCAGACCATTAACACCCTCTGCTGGAAAGGCCCAAGACCTTGGGAGCCAAGTGCCCCAGCCCACACTCCTGCTGGCTCACATGCCAGCAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,187,150
GTCTGGAGCATCACCCACAACCACAAGTGAGCATCGGAGAGTCTGGAGCAGCGCCCACACCCCTAGGCGAGCATGTGACAGCCTGGAGCAGTGCCCACACCCCCAGGTGAGCATCTGACAGCGTGGAGCAGCACCCACAGCCCCAGGTGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,948,050
TCCAAGTGGATAAATCCATTGACTGTTAACCACAGCAACCACAACTTGTAAGTCTTTCTAAAGACCAATTCAAACCTTCCATTTGTTTTACTAGCTAATAAAATGGTGCAGACTATTTAGGCTTCAAAGTCATAAATGTCTCCATCTAAA
11
G000010205
ASM1020v1
GCF_000010205.1
PRJNA224116
SAMD00060919
null
2008/05/29
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
642,555,145
RS_GCF_000010205.1
Monoisolate
Complete Genome
Full
na
Major
334,380
784
Orientia tsutsugamushi str. Ikeda
strain=Ikeda
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Orientia
Orientia tsutsugamushi
true
Orientia tsutsugamushi str. Ikeda
Eubacteria
Proteobacteria
0.99
1
0.9
1
2,008,987
1
30.51
2,008,987
1
2,188
522,417
76.576503
99.51
0.49
0
186
yes
yes
yes
20
high
709,410
CTTTCATAATTAGATGATTTATAAAGATTCTGTATTTTATTACTGTTAATAACTACTGTTCTTTTTTGAGATAAAACACTTGAGTGAATCCATCCAAAGTCACCTGTTATATCGCGCACATAGTACCATTGGTCAAATTTATCGACTATT
0no label
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Yersinia pestis CO92 ASM906v1
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
876,850
CAATTTCCTTACGACAAATCGAGATTTTTCATGGCGTCATGACCACGGGCAACCTGACTGAAGCGGCGTTGTTACTGCAAACATCACAACCGACTGTCAGCCGCGAATTGGCCCGCTTTGAGCAATTGGTGCAACTCACGCTTTTTGAAC
0no label
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Sulfurovum sp. NBC37-1 ASM1034v1
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
1,494,740
AGAACGGCAAATATGTCATTACACTGAGTGAGAAAAAGCTGATGGAGTACATTCATGCGGCACAGAAAAACGGACTTGTACTCTTCATCGATGTACAGCTTGGCAAAAAAAGCCCTGCACAGGCAGTCAAACCATTGCTGAAGTACCTGA
0no label
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
1,314,430
CTGATAGAATAAATAAAATTAGGGGTAAATATAATTTTACAGGCAGCGTTTACATCAGTATCAGATTATGCTAAAATGAACACGTTAAACGTCCCGCAATAATAGTAAGGCCTTAAACTAAAAGTTGGGACGGTGTGCTTTTCCGGCCCC
0no label
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Borrelia burgdorferi B31
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
793,520
AGGGTAGAAAGTGAACTTGAGTTAAATCCTAATAGAAATATTTTTAAAATTAAACAAGAGTATGAAGTTTTAAAAAAAGTTAAATTTTTACTTACTAAAGGTTGAAAATCCATTCGTTTAAGTTCTATTTTTTATAAAAATTCTTAAAAT
0no label
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
3,230,110
GCACGTCGTCATACCAGGTGGTGCGCGGGATGTGCAGGTGGCCGTAGACCGAGCACACCGCGTTGTAGCGGGTGTGCCAGTCGGCGGTCTTGGTGGTGCCGCACCACAGCGAGAACTCCGGGTAGAACAACGCGTCGCACGGCTCGCGTA
0no label
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Synechococcus elongatus PCC 6301
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
72,150
CCTGCTGAAATCCTGGCTGATTCTGCATTGCGATCGCCCAATTCCGAAGTCTGCAGCCAATCTGCTGCTATAGGATTCCCAATGGATGACGCCAATTCTCATCACGGCTTTCTAGCCTAAAGCTGTAAGGAAGTCAGGCATTTGACGATC
0no label
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
989,950
GTCGCCCGCGACTCGGGCGCCGCCATCGCCGCCCGCCGCGCCGGCGTCATCGACCAGGTGGACGCGACCCGTATCGTGATCCGCGCGACGGGCGAGACCGACCCGTCGAAGTCGGGCGTCGACATCTATCGCCTGATGAAGTTCCAGCGC
0no label
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
485,550
GAAATGAACCTGCCCGAAATAATGGAGTCCTCTGACATTGTTTTTGTGGCCCTGCCGCACGGGCACGCCATGCCGGCCGCCCGCGAGGCGGCGCGCCGGGGCAGGAAGCTCATCGACCTGGGGGCCGACTTCCGCCTTAAGGACTTCCGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,738,100
CAGGAATGTAGGTATTTCCAGGTTTTGAGTTTATCACAAACTCAGAGCCCAAGAAAGGAAAATAAAGGAGGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGAGCGGGGAGACTAAAACTCCCCTTCTAAATAAACTG
11
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
4,766,970
GCACTACACCGACTGGGGTATTGGCCACGTGCACTCCGGTGCTCTGGGCTGGGTCGCCTTCGTTTCCTTCGGCGCTCTGTACTACCTGGTTCCCAAGCTGTGGGGCCGCAAGGAGCTGTACTCGCTGAAGCTGGTGGGGGTCCATTTCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,828,550
ACAATCAATGTGTTAACTGAGAAAACTAAATTTTAAGAAAACAACCCAGAAAAACATAGTGCCTTCCTCACAACTGCCTTTCTTGCCACCACTGTCCACCTGGGCCCCTGCCTTGCCAGAGGGAGCCACCCCGCTTCTGACGCTGGAAGC
11
G000007185
ASM718v1
GCA_000007185.1
PRJNA294
SAMN02603235
null
2002/04/03
Fidelity Systems
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/185/GCA_000007185.1_ASM718v1
638,154,507
GB_GCA_000007185.1
Monoisolate
Complete Genome
Full
na
Major
190,192
2,320
Methanopyrus kandleri AV19
strain=AV19
null
Archaea
Euryarchaeota
Methanopyri
Methanopyrales
Methanopyraceae
Methanopyrus
Methanopyrus kandleri
true
Methanopyrus kandleri AV19
Archaea
Euryarchaeota
1
1
0.9
1
1,694,969
1
61.16
1,694,969
1
1,814
523,004
90.896353
96.74
1.6
0
146
yes
yes
yes
15
medium
1,204,450
CCCGCGCGGCGGAGGAGGCCCTCACCCTCGAGAAGCTCGAGGCCATGACCGCGGTGTGCTCCGTGGGGATCGACATGGTAGTCGTACCCGGCGACACCCCGGTCGAGACCATCGCCGGTATCATCGCGGACGAGGCGGCGATCGGCGTGG
0no label
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
[Bacillus thuringiensis] serovar konkukian str. 97-27
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
882,700
GGTTGGACAAGGTATCGGTAATATGGTGAGCGGATTGTTTGGCGGATTAGCAGGGGCAGGTGCGACTGTACGGTCTATCGTGAATATAAGAAGTGGCGGTAAAACGGCGCTTTCAGCATGTATGCATAGTGTTATATTATTTATTTTCAT
0no label
G000010285
ASM1028v1
GCF_000010285.1
PRJNA224116
SAMD00060935
null
2008/04/17
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/285/GCF_000010285.1_ASM1028v1
642,555,133
RS_GCF_000010285.1
Monoisolate
Complete Genome
Full
representative genome
Major
378,753
72,000
Kocuria rhizophila DC2201
strain=DC2201 (= NBRC 103217)
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Kocuria
Kocuria rhizophila
true
Kocuria rhizophila DC2201
Eubacteria
Actinobacteria
1
1
1
1
2,697,540
1
71.16
2,697,540
1
2,314
807,429
88.19847
98.68
0
0
324
yes
yes
yes
20
high
2,666,950
CCGCCCGGCGCTCGAGCCCGCCACCCGGGACCCGAAGATCAGCGACGAGCTGCTCGACCAGGGCCGCGAGGCCTACCGCGTGGACCGCGAGCACGTGTTCCACTCATGGAGCGCGCAGCAGAAGATCACGCCCATGACGGTCGTCAGGGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,006,850
CCCCGGTACTCACTCAGCCCCAGGGAGTGTCCCTGGCTCCCAGGGCTCTGGGAGGTGAGGGCAGGTCCCGGGGGAGGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAGGT
11
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Symbiobacterium thermophilum IAM 14863 IAM14863
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
314,990
CGATGATGCACGTGCTGGCCGCCTACTTTCACGGCACTTTGCGTGGGGCCGTGGAGATGGTGGAACGCCAGCTGGGACTCGAATCACTGGCTGCAGTTCGGGAAAAGGTGCGGCACCGGGTCGTGGAGACCGTGGGGCGGGGCATTGAAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
635,700
CCAGGGCCCGGTCTCTCAGAGCCACCTTCATCCGTCACACCAGACAGATCCAGGTCCCGGAGGGAGTTGAGGAGGAGCCCCTCGCAGAGCTCTTGGGAGACTGTCCTATGTCTTTCTGAGCCTCAGTTTCCCCTGTGGGCACCGAGGGGT
11
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Nitrosomonas europaea ATCC 19718
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
2,706,210
GATTCGACTCAGAGCAAACCACTTTTACGTGTGGATGATCTGAAAATACATTTCCCGGTGCACAAAGGATTATTCAAACGGGTAGCAGGCCATGTCAAAGCGGTAGATGGCGTATCACTGCAAATTGACGGCGGCAGAACGCTGGCACTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,048,150
GCCACTGCACTCCAGCCTTGGCGACAGAGAGTCCGTCGCAAAAGAAAAAAACAAACAAACAAACAAAAACTAAGAGCTTTTGTAAAGAATAGCTTCAGGCCAGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTCGGAGGCCAAGGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,039,600
TATTGATCCAGTGATTTGATTCTGGGATTCCGTCCATGCTCAGACGTAGATTCTTATTGGAAAAAAAGAAAAAGAAAGAAAAAACTTGGCACCGGTGACCCAAACAAGCCAGTCTGATCCAGGCACACTGGAGGCAGCCAGGGCTTATAA
11
G000007025
ASM702v1
GCF_000007025.1
PRJNA224116
SAMN02603141
null
2002/11/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1
637,000,243
RS_GCF_000007025.1
Monoisolate
Complete Genome
Full
representative genome
Major
272,944
781
Rickettsia conorii str. Malish 7
strain=Malish 7
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Rickettsia
Rickettsia conorii
true
Rickettsia conorii str. Malish 7
Eubacteria
Proteobacteria
1
1
0.9
1
1,268,755
1
32.44
1,268,755
1
1,435
347,621
80.686027
99.46
0.33
0
218
yes
yes
yes
20
high
131,560
AGATATTACAGGTATCCGAGACGTTTCCGTATAATATAAAAATACGAGATATTAACTTGTTGAAATCAATGTTAGATGATAGTAATAATTTCATCGAAGAAGCATTAATTAAGATAGCAGTTAATGCCCTTGAAAATAATAATGGTTACG
0no label