#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
4,075,630
ATTTAACTTTATTCAAGGATCATTCTTCGATGGTTAAAGCGATAGCCGAAAGTACTGCTATTCGAAGCAACGGGCACGCCTGGTGTACCGCTGATGATGACCGTTGTGTTGGCAACTCGACTGAACGTACCCGCTGCGGTGGCTGCACAA
0no label
G000008045
ASM804v1
GCF_000008045.1
PRJNA224116
SAMN02603327
null
2004/08/19
Human Genome Sequencing Center, Baylor College of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/045/GCF_000008045.1_ASM804v1
637,000,246
RS_GCF_000008045.1
Monoisolate
Complete Genome
Full
representative genome
Major
257,363
785
Rickettsia typhi str. Wilmington
strain=Wilmington
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Rickettsia
Rickettsia typhi
true
Rickettsia typhi str. Wilmington
Eubacteria
Proteobacteria
1
1
0.9
1
1,111,496
1
28.92
1,111,496
1
868
286,112
75.845617
99.66
0.33
0
211
yes
yes
yes
20
high
748,540
CAAAAGTATATAAATCAAACGATATAGTATCGGCACAAAAAATACAAAATAATTCTATTAGAATTGGACTATTGTTATCATTGCCCGCAACATTTGGTATTATAATATTATCTCATCCAATTACTCATATAATTTATGAAAGAGGAGTAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,357,700
CGGACCGGCTGCTCCTGCAGGACATCTGCTGAGTCCAGAAGGAATCAGTGCACGACGCCCGCAGAGCCCCAAATGCCCTGGGAGATCAGCAGGACTTCAAAGACAAGCAGGGGCCTCGGTGGCCACCTGACTTCTCCCTAGGCAGCCTCC
11
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,411,410
CGACATGGCGCTCTATCAGGCGAAGAACGGCGGACGGAACCGCGTCGTCGCTGCCGCTGCCTGATCCGCCGCACATGCTGAGCTTTTCAGGGCCTCGCGCGCGGGTTCCTTCAGGTTCCGTTTTTCTTCGCGTGGCCCGTGCCGGGGTAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,708,150
TTTATCTATCTCTTCTTTTATTGCTAGTGCTTTTGGTGTTGCGTCAAAAAAAATTCTTAACACACAGCATAAGCATGAACTTTACTGCTATGTTTTCTCCTAGAAGAATCATAACTTTAGTTCTTACATTTATGTCTTTGATCTATTCAA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,957,950
CTTCCTCTCTTTTCATCAATTACTGCATCTCGCATTGCCCCAGGGGAGCCGCTGTCAGGGTGGACATGTGGATGGATGGCTCCGATGTGTGTCAGCCCTGGGAGGAGAAAGTGGGGATTAGCTGACTTTCAAACAAGACACACACAAGGG
11
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
3,321,760
TCTCAGCAACAGGATCGGTCGGAAGCGGCATGGACAGGATCGACGATGACGGGAACGCGACACGATACCGCGTCGCGGGCTCCGCCGCGCCTCTTGACGGCGGCACCGCCACCGCCTCCGGCCGCGAGCCCTGTAGCGGCGTGCGCGGTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,007,100
ACCCCTCCCCGCCTCTGGGGACTGGGCGACAGGAGGACATCCAGTCGGCTTTCTCAGAGGGTCCCCTTGCAGGCCCCATTGCTCACCCTTCACCTTGCAGACTGCGGCGGCCAACGTCTGCTATGTGGCCAGAGCCCTCTGGGGAGGGGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,072,900
CCCTGGCAAGAACCACCATCTCTCCTGGTGGCCACACAACCTCCTCACTGGACCGCCTTCCTCGACCTCCAATGTCCAGAGGTAGCTCCCCAAAGCAGGGGTATGGCCCCCACTCCCTTAAAACCCTCAGCCATGCAACAGGGGTGAGTG
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
1,886,300
TCCCGCTGTTCCGGGGCGGCCCGATGCTCTACGCCGACACCGTGGGCTTGTACAACGTCGCCCAGGCCATGCGCCGCTACGGCAAGGGTTACCACGGCGAAGCCTGGAAGCCGGCGCCGCTGCTGCAGAAGCTGGCCGACGCCGGCCAGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
351,600
AGGGGTGCCTCCAGCTTTGGACCCAGTCAGGGTCTTTTCTGGAAGACACCATGGGCCCCGGGTAGGCCCCCACACCCAGCCAGAAACCCAGGGCCAGCCCCATGCCCCTCCTTAACCACACTGTGGGCCTGAGCATGATGAGATGCTGGT
11
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
1,025,440
ATTTTCATAATTTTCTAGACTATAAGTTTTAATAATTCCAGAAATATGGAGATTCTTAGTAATGGTATATTGATTACGGAATTGTACTAATTCACTAAAGCTAGGATATTCATACCGCAACATTTTAATAACTATTGGCTTTTGATCTTC
0no label
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Symbiobacterium thermophilum IAM 14863 IAM14863
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
852,020
AGTGAACGGCACCCCGACTGAGAACCCGTCGGCCCTGGTGCGCATCCTCGATGCCGAGAGCGGCGCGGTCGTCACCTCCTTCGTGATGAACGGCGGCGGCCTGACCTACGAGGACGGCACCTACCGGGTGCAGTTCGATCCGCAGCGGTA
0no label
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
4,980,040
GCCTTGTCCGTCAGGGGCGCGCCCTCGTGCGTGACGTCTCTCTCAGCCTCATGCCCGGCACCGTCACCGTCATCGTCGGCCCAAACGGCGCGGGCAAGTCGAGCCTGCTCAAGCTGCTGGCCGGCGAGGTGAAGCCCAGTTCCGGGCGCG
0no label
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
4,791,410
GCCGCCGCGTTCCAGCACGCCGGCCAGGGTGACGGTGAGTTCGGCCTGGTCCAGCACGCGCGCAGGTCCGGTGCCGAACACGTTTTCGACCTGGGCGCCCAGGCGCAACGGCGGGCGCAGGGCGTCGCGTTCGGCTTCGGCGGTGAGCAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,960,500
TTTAAAAAAAAAAAAAAAAAAAAAAAGGAAGTAAAAGCTTCATGTGGCCTGTACTGTTACTTCTCTATGGAAAGCCACAAGGCCTCAAAACCAGCAAAACATCTGCTTCTCAGAGACCAGCCTTTAGCTTGTGGTTTACCAGAAATGTAG
11
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Pelotomaculum thermopropionicum SI
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
1,638,130
TTTACCTGTATTCTGGCCACGAATACGCATTCACGTTTGAGACAGAAACTGATGCAAGTGCTCTCGTCACCGCTACATTTAGCGATTTCTTTGAAAAAGAATTTGGCGGGACACAGCGGAAAATCTATTTCTATAGTATGAGTCTATCCA
0no label
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Enterococcus faecalis V583 ASM778v1
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
1,710,410
TTACTTTCTAAGGTTGGATAAAGTAAATCTGGACGATCGTCACGGATAATTGGACGATTGGTTGGGATTTGAATGACTTGAATATTGTAAATTTCACGGAATTCTTCTTCTTCTGTTTTAGCAGTACCAGTCATCCCGGCTAGTTTTTTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,196,850
CATCTATGTTTTGCTTTGCTTTTTTTTTGAAAAGGGGTCCCAGGGTTGCTTAAAAAAATTCAAAAGTCACCATTGGCCGGGCTCAGTGGCTCATGCCCATAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,707,100
CTAGTTCTGATGCCTGCTCTCTGTCTTTAAACTGTTTTTTCTGCCTTTAAATAAGACTTGCAATTTTTTTGCTGAAAGGCAGACATGATGTGCTGAAGAAAAGGCACTGAGCTAAGTGGGTTTTAGTGATGAGATGGTGAGGTCAGGGGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,983,150
TGTTAATGCACTTCGGCTCCATTTACCAGTTAACGATTTAGTGATCCCACTGAGAAGCCAGGAGCTCCAACAGCCACCGAGAAGCACAGCACCCAGCAGAGCTGCGTGTGGAGGCAACGCTCACCTCCCTCTCCATGGGACCTAAATGAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,814,200
ATGATTGAGTCTTATTGTAGCTCCTTAAGAAATGTCAAGGCTGGGCACGGTGGCTCACGCCTGTACTCCCAGCACCATGGGAGGCTGAGGCGGGTGGATCACAAGGTCAGGAGTTTGAGACCAGCCTGGTCAACATGGTGAAACCCCGTC
11
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
1,534,000
CTGGTCGATCAGGTAGCCGTTGGCCGCGTGCACTTCCACGCCGTCGAAGCCAGCATCGATGGCGTTACGCGCAGCTGCGCGGTAGTCCTCGATCAGCGCGGGAATTTCCTCCAGCGCCAGTGCACGCGGCTCGGAGACATCAGAAAAGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,100,900
ACCCTGCACCCCCAGGTGAGCATCTGACAGTCTGGAACAGCACCCACACACCCAGGCGAGCATCTGACAGCCTGGAACAGCACCCATACGCCCAGATGAGAATCTGACGGCCTGGAAAAGCACCCTGCACCCCCAGGTGCGCACCTGACA
11
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Neisseria gonorrhoeae FA 1090
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
1,526,330
AAAGCGTCGCCGCAGGCACGGGCAAAGAATACGGCAGCCTGTTTGCCGGTACGACCGTCATCGGCATCATTTCCACCGCCGCCTGGGGCTTGGGCTATTTCGGACAGCCGCACATTTTGGCGCGCTTTATGGCCGCCGAAAGCGCGAAAT
0no label
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Staphylococcus haemolyticus JCSC1435
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
387,660
CTCAATGGGACAATGCAATCTTATGCACGTAACCAAAAAGAAGGTGCGTATATATGGGCGGATATAGACGCATGGATTAAAAACGATTTAACTTGGAAGACTATGAAACGAGATGAAGATTATTTAAAACTCGTAGATGGCGTTAAGGTC
0no label
G000008625
ASM862v1
GCF_000008625.1
PRJNA57765
SAMN02603207
null
1999/12/22
DIVERSA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/625/GCF_000008625.1_ASM862v1
637,000,010
RS_GCF_000008625.1
Monoisolate
Complete Genome
Full
reference genome
Major
224,324
63,363
Aquifex aeolicus VF5
strain=VF5
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Aquifex
Aquifex aeolicus
true
Aquifex aeolicus VF5
Eubacteria
Bacteria
1
0.994
0.9
1
1,590,791
2
43.3
1,551,335
1
1,776
514,666
95.304851
98.98
1.22
75
317
yes
yes
yes
20
high
1,514,630
AAAGTATTAGAAAGGATAAAAGGGAAAGGAAAGGGTTAGTAGAGAACGATTACGTCCACCGCCCTTTGTTCGGGGTGCCTTTCCCCTATTAAATTTGCAAGCTCTTCACCGTAGGAAGCTATCCTTACTTTTTCAACGGGTATTCCGTTC
0no label
G000010425
ASM1042v1
GCF_000010425.1
PRJNA224116
SAMD00061080
null
2006/12/05
Gifu University, Life Science Research Center, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1
639,633,010
RS_GCF_000010425.1
Monoisolate
Complete Genome
Full
representative genome
Major
367,928
1,680
Bifidobacterium adolescentis ATCC 15703
strain=ATCC 15703
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium adolescentis
true
Bifidobacterium adolescentis ATCC 15703
Eubacteria
Actinobacteria
1
1
1
1
2,089,645
1
59.18
2,089,645
1
1,683
614,966
86.722338
100
0
0
284
yes
yes
yes
20
high
1,850,290
CGTATTCGTCACAACAAAAGCGGGTGAACCGTTGATCGCTCAACGACTCACCCGCCCGAACAAGCCCCGTTGCCTGTCTGCTGGCCCGCTCAGACCGCCATCGGCGTATCGGATTCGCGGAAGCGCAGCACGAGCGCCAGTCCGGCTCCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,926,450
GGGCGGGGCCTCCTTAGCCAGGCTTGAGGGCTGATATCCTCAACCAGAAACCACTTGCCAGCACGGGCACTGGGCAGCTGCAGCCCACAGTTGGCCAGGCCTGGGTTGAGAGGGTCCTCCGGGACCATGCAGATCAGGCTGGGCTGAAGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,795,950
GGTACCCAGTTTCCATCAACCTACAAGGTACTCTTGGCCAATTCACCTTTAATGTTCCACCTGGAAAATTCTAAAGTAGAATTTTCCTGTATTCAGATCTTCCTTCCTTTTTTCCCCCACTTCCTTCTCTGGCATAATTTCCCCATGAAA
11
G000007205
ASM720v1
GCF_000007205.1
PRJNA224116
SAMN02602979
null
2003/07/25
ALTANA Pharma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1
637,000,071
RS_GCF_000007205.1
Monoisolate
Complete Genome
Full
na
Major
182,082
83,558
Chlamydophila pneumoniae TW-183
strain=TW-183
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Chlamydophila pneumoniae TW-183
Eubacteria
Chlamydiae
1
1
1
1
1,225,935
1
40.58
1,225,935
1
1,055
372,698
89.583869
99.49
0
0
219
yes
yes
yes
20
high
849,030
AAAAAATTTATGGATACTTTGTTTTTACTACAATTTCTTCTTTAGGCTGGTTTTTTGCATTGAGACGTAGGGAAAATCAATTAAAAACAGCAGCTGTTCAGCTTCTTCAAACAAAAATTAGAAAATTAACAGAAAATAATGAAGGGTTAA
0no label
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
3,121,430
CTCGAAGATCTTGTCGTGATAGGCGGGCTCGATGCCGATTCCGTTGTCGGCCAGGCTGAACCGCCACAGATCGGAGCCAGTCCGCTCGGCCGCGATGGCGATCTGCAGCGGCCGCTCCCGGCTCCGGTACTTGACGGCGTTGCCGATCAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,183,900
AACGTTTCAGCTCTGACAAGAGAGTCTGGAGATGACTTTGTGACAGATTTACAGAAAACTAATCAAAGGAAACGAATGAGACAATTACTAATAACACAGAGGAAAAAGTGTTAAGAAAGGCTAGGTAATCCTGGTATATGATCTGGGTCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,250,100
CCTGTTGCCCGCTGTGCTGTGCGCAGCCCTCCCTTTCCCACGGTCTTGGCTCTGCCAGTCACATCTTACCCCCTCCCAGCTCACTCTGCTCCAAAAACACCAGCCACAAGTACTTCCCCTCCCACACATCTTCCTCTAATCCTCTGTGGC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,765,200
AGCTGAGATGTTCTTTCTGTGTGAAGCCCCAGGTGTGCCGGGCTGGGCTGTGTCCGGAATTACCCATCAAATGGGCCTGGGGAGGCCTGCTGGGCTGGCACCCTCCCGCGGCCTCCTCCCGCCGTCCTGCCCGCTGTGGCTGGCCAGTTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,808,200
GAAAGAATATTTGTTGTTCTGTTACTTTACTCTCATAATAGATTAATTACTTTATCTTTCAGAGTTGTCTTTTTTTTTGGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGCGGCGCGGTCTCGGCTCACTTCAACCTCCGCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,756,350
GAGGGTGGGCTGCAAGGACGGGGGTGGGTCAAGGGAGAGCAAGGAGAGCAAGGGCCTGAGGAGGCTGGTTCCCTGCCCAGCGCTGGGCGGGCAGAGGGTGAGACCAGCCAAGCTGCACAGGCCCCAGGTGGGCAGGGTGAAGCCAGGGGC
11
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Nitrosomonas europaea ATCC 19718
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
830,180
TGGGGCAGATCGGGCTGGCTGGACGTGAAATGCTGCCCGCCAGAGTGTTGTCGCAAGGGCAGCGCAGGAGAGTGGCTCTGGCTCGTTTGCTGGTGACTCGAACCAAGTTATGGATCCTGGATGAGCCCTTGACTGCTCTTGACGTTGCAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
301,200
TAGTTTTAATACCAGTGACATTAAGATGTATAACACAAAGATTCATATAAATAAAAATTACAACATTGAAAATAATATTAGATGACACTAAAACTATCGTAGAAATACACATTTATATAAAACAAAGTAACATCAAGTATTAAATAAATT
11
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Bacillus cereus ATCC 14579
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
4,674,020
TGTCCAACGTACATCGCATTAAATGCCCGTCTTCCGCCTTCTGGCCAAACCGTACCAACCATCGCATACATCGATGGGAAGACCATTCCAGAACCGAAGCCGATTAACGCTAGCCATTCAACATATAACGGCCAACCGTGGAAGAACACA
0no label
G000007485
ASM748v1
GCF_000007485.1
PRJNA224116
SAMN02603248
null
2003/02/24
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/485/GCF_000007485.1_ASM748v1
637,000,331
RS_GCF_000007485.1
Monoisolate
Complete Genome
Full
representative genome
Major
203,267
2,039
Tropheryma whipplei str. Twist
strain=Twist
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
null
Tropheryma
Tropheryma whipplei
true
Tropheryma whipplei str. Twist
Eubacteria
Actinobacteria
1
1
1
1
927,303
1
46.33
927,303
1
934
278,179
88.37435
76.27
0
0
224
yes
yes
yes
20
medium
877,110
AAAGGCAAAGGTTAGAGTTTCCTTTAGGGATTCTTCTGGGGTTTTGTCAAACAGGGCATTGACGTCATTTACATCTGCCGATAGTGGGGAAACAGATGAGACTGTTAGGGTTGCGGTAGATGGTGCAGAGGTGTATAGGGGTTGACCGTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,164,850
TGTGTTTCTGTGACTTTCAAGACTCTAGTTAACGCAGGCCCCTCACATACGGATCCAGAACGCATTCCTCTTAAACTCAGCGCTGGGAAAGGAGAAAGGAAAACTTCTTCTTTCTTGAGGCCATGGTTTAGAGGATCAACACTTTTTTTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,473,700
TCACTGCAACTTCCACCTCCTGGGTTCAAGCAATTATCCTTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGCACGTGCCACCATGCCCAGCCAATTTTTGTGTTTTTGGTAGAGAGGGTTTCACCCTGTTGGCCGGGCTGGTCTCGAA
11
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
3,704,870
GCAAGGCGTGAAACGGAGCTAGCGGACGCAGGATCTGAGCCGGGGCGCTCCTGCCAAGACCGCCAATCCGCTTTGGCGCAGGTGGAAAAGAGGCTCAGGTCAGACGGAGATACCGTCGGCCAGTGTCACGGACGTATTACGGACCGGCAC
0no label
G000007765
ASM776v1
GCF_000007765.1
PRJNA57631
SAMN02603970
null
2005/07/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/765/GCF_000007765.1_ASM776v1
637,000,086
RS_GCF_000007765.2
Monoisolate
Complete Genome
Full
reference genome
Major
227,377
777
Coxiella burnetii RSA 493
strain=RSA 493
null
Bacteria
Proteobacteria
Gammaproteobacteria
Legionellales
Coxiellaceae
Coxiella
Coxiella burnetii
true
Coxiella burnetii RSA 493 ASM776v1
Eubacteria
Proteobacteria
1
0.995
0.9
1
2,032,674
2
42.6
1,995,281
1
2,058
613,036
88.849515
100
0
0
308
yes
yes
yes
20
high
18,330
ATAAACATGAGCAGACAGCCATCATTGACGAGACAAGTTTATAGGGACAAAAAAAACCAACCTTTAAACAAGCTACTTGTTTTTCTTTTTAATCTTCGTTCTGATAATCTCCCTACCGGTATTTGTCCTGGTCCTTTCCAAGAATTAGCA
0no label
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Pyrococcus furiosus DSM 3638
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
139,100
TACCGTCGGTTGGATATCCGGCGGGAAGCTGGGAGGCATCGGCTCCCAACCCTAAATACGTCCCGAGACCGATAGCGAACTAGTACCGTGAGGGAAAGCTGAAAAGCACCCCGGGAGGGGGGTGAAAAGAGCCTGAAACCGGGCGGCGAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,964,700
AGCTCCCTGTGGCCCTATTTCTGTCAGCTGCAGCAGAGTTCTAGAAGAAGTGCCTGGCGTGCTCTCTGTCCATTCCCACTCCTTCCATCAGTCACCATGCCCTCTAGATTCATTCTTCACTTCATGGAGTTTCCTGTTCGGCATGCTCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
406,650
CCCGGGAACCGCCTCCCACTCCCCCCACCAACCCCGGGAACCGCCTGCCCCCGCCACCAACCCCGGGAACCGCCTCCCACTCCCCCCGCAACCCCGGGAACCGCCTCCCACTCCCCCCGCAACCCCGGGAACCGCCTCCCACTCCCCCCG
11
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Synechocystis sp. PCC 6803 ASM972v1
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
844,610
GGCCCATCCTTTACGACGGGCTGGAATTCCCTTTGGTTTTACGATGGGGAACCACGATGCTTCCGGTGCTCTGGATCAAAATCGTCGTTTTCGGTTTCAAAATGAACGGGATTTGGCGGCCCGTTATTGGCGCAACCCGGCCCATGATCC
0no label
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Corynebacterium jeikeium K411 K411 = NCTC 11915
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
1,141,920
GGGCTGCATGCCGCCCCAGCGCACATCGGAGACCTTGACTACATCGCCGGATTGTGGGGCCTCGATCATCTTTCCGTCACCCAGGTACAGGGCAACGTGGCCCGGCCAGAACAGCATGTCGCCACGCTTGGCCTGCGAGGAAGGAACCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,395,450
AAGGGCTGCTGCCTTCACTTCGCTGCAACAGTTGTCAAAAAGAAAGACAGTTCTCCCCAAGAATGTCAATTCGGCTTCTCTGCTACTGTGAGTCTCCCATCTACAAGGACAGCTCTGAGCCATTGGGCAGCAGAGCGCCTGGGATCTCAC
11
G000009245
ASM924v1
GCF_000009245.1
PRJNA224116
SAMEA3138197
null
2006/03/02
LLNL
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
637,000,111
RS_GCF_000009245.1
Monoisolate
Complete Genome
Full
na
Major
376,619
263
Francisella tularensis subsp. holarctica LVS
strain=LVS
null
Bacteria
Proteobacteria
Gammaproteobacteria
Thiotrichales
Francisellaceae
Francisella
Francisella tularensis
true
Francisella tularensis subsp. holarctica LVS ASM924v1
Eubacteria
Proteobacteria
1
1
0.9
1
1,895,994
1
32.15
1,895,994
1
2,100
571,581
88.799806
99.82
0.41
100
311
yes
yes
yes
20
high
1,480,050
CAGTTGTGGCAAGCTTGCCGAAGAACTTGACTATAATGAAATTAACATAAATGTTGGCTGCCCAAGTGAAAGAGTTAAAAAAGGTAATTTTGGCTTATCATTAATGGCAGAGCCAGAGCTTGTAGCAGACTGTGTCAAAGCTATGAAAGA
0no label
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Xylella fastidiosa 9a5c
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
365,560
AAGCCTCTGCGCTGATTGATGCCTTACGTGCATCTCGTACTGTATTACAGCATTTGAATACGCCATTGTCGAACAAGCTGATGTTGTCTGGCTTTTCGCAAGGTGGTCATACTGCAATGGCGACCCAGCGTGAAATTGAAGCGCATCTGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
938,250
GGCTGGTGGCATGTACATGGGCAGCAGTGGGGTGCAGGGCCGAGCTTGGGCGCCTCATTTCACAGAAGGAAACAAGGGGAGGTGAGAGACAGTGCCGCAGAGCCTCCCGAGAGGGAGGGCCAGTGTTGGTGAGGGCGTCTGGTTGTCCGG
11
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Bacteroides thetaiotaomicron VPI-5482
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
1,617,720
GGTACACGTACACCCGCAATCTTTTTCACGCCAAGATGAACATCATTCACCTTTATCAATGAAGCGTCAAACTCATTCCAAAGGGCGAACATGGCTTCATAGGCTTGAATTTGTTGTTCGAGCCTATCCTCCAGATCGGCAGCTTCCGTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,930,500
GGGACCAGCTCACACAGAGTCTCGGGCCTGCAGCAGTGCCCTGCTCCAGACAGGCAGGGGCATCATGCCATCCATGGGCATATCTAGGGGGCTGAGGGCTGGCCACGCTCCTGACCTGGCCTCCATCTCCCCATGGTGGTCACTCTGGCT
11
G000008265
ASM826v1
GCF_000008265.1
PRJNA224116
SAMN02603345
null
2004/06/08
Institut of Microbiology and Genetics, University of Goettingen
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/265/GCF_000008265.1_ASM826v1
638,154,512
RS_GCF_000008265.1
Monoisolate
Complete Genome
Full
representative genome
Major
263,820
82,076
Picrophilus torridus DSM 9790
strain=DSM 9790
null
Archaea
Euryarchaeota
Thermoplasmata
Thermoplasmatales
Picrophilaceae
Picrophilus
Picrophilus torridus
true
Picrophilus torridus DSM 9790
Archaea
Euryarchaeota
0.99
1
0.8
0.9
1,545,895
1
35.97
1,545,895
1
1,599
485,076
92.441789
99.59
0
0
196
no
yes
yes
18
medium
601,900
ATCTTTCTCTGCTGCACCCTTGCCTCCTGAAGGTAATAAAATATGATCTTTCTGTCAATCTCATCCATTGAAAAGTAAATAATTATACATTTAAATTTTTATCTATGCCATGGGAACATTTATAAAAATTATAATTATTGCATTATATGA
0no label
G000009945
ASM994v1
GCF_000009945.1
PRJNA224116
SAMD00061108
null
2006/03/09
Japanese Consortium/Yamaguchi Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/945/GCF_000009945.1_ASM994v1
637,000,067
RS_GCF_000009945.1
Monoisolate
Complete Genome
Full
representative genome
Major
264,202
83,556
Chlamydia felis Fe/C-56
strain=Fe/C-56
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia felis
true
Chlamydia felis Fe/C-56
Eubacteria
Chlamydiae
1
0.992
1
1
1,173,791
2
39.34
1,166,239
1
994
361,027
90.6353
99.49
0
0
223
yes
yes
yes
20
high
826,280
TCTAAAGAAGAACCAAAAGCGACCAAACCATAACGCGAGACAGCTCCATACGAAGGCTTGAATCCGACAACACCGCAAAATGCTGCGGGCTGACGGATGGATCCTCCCGTATCAGAACCCAAAGCCATGGGGCAAAACCTTGCAGAAACC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,071,850
GTGCCTGGCACCCGGGAAAGGCCAGCAGACATTTTAGAAGAACGCACTTTGCTGACGGACATGGAGTGAGGAATGTTTCACTCATGAGCTGGGTTTGGCGTCGGTTCTATGGTTTTCTGCAGAGTCCCCCTCTGGCTCCCCTGACACCCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,432,200
GTCTGAGTTTTCAAATGTATTGGCAAAAACCTGTTCATAGTAGTCTGTTATCGCATGGTAAGCTTTCATTCTACATAGATTAAGTAATGGAGCTTGGATGTGAAGCAGGCTATTGGAAGACTACTGCAGTAATCCAGGCCAGAAATAACA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,079,350
AAATATAGCCGGGCGAGGTGGCACGCGCCTGTAGTCCCAACTACTCCGGAGGCTGAGGCAGGGGAATCGCTTCAACCCGGGATGCGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGGGACAGAGAGAGACTCTGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,032,500
CTTTGTTACAACTTCGGGAGGATGGAAGGGAGCAGGTGGTTGCAAGGAAGCAGCCCCAGAGAGCTGGAAGGAGGGTACTCTGCCCTGTGAACCACATCAGGGGACGTCCAGTGAATCCCAGCAGACCCAGAAGCCAGACCCCCAAGTATG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,867,750
TCTCTGAGGACACTGTTGCTTACTTCCCTGTACTTTCTAAATGCTGTTGTTGGCCAATGGTATTACCATCCATCTGTTTTCTTTTAAGTGAATAAATGCACTCCTCACACACTCTGACATTTGTAGATATTTAAGTTTACCCTCCATAGA
11
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
4,564,040
CCTTGCCCACCTGGAGCAGCTAACGCTGCGCCGCCGCATCCCGCATGTCCTTCCCAGGATGCTTTCCAGATTATACGGCCGATATTCGCAGACGACTACAGGATGCTTCCGAATAGGGACGCATAGACAATCACTGCAATCGCCAGAGTA
0no label
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Clostridium acetobutylicum ATCC 824
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
2,037,100
TTATCATTTAAAGCTCCTATTGCTCCCCCACCACCAGCTAAACTTTGTCCCAACATAAATGCCCTCTGTGAGCTGGTCATTTGGAATAGGTTAATAGATACATCGCAGCTATCAAATTGTGTATCCTGGTCAACTTTTCTATTTTCTGCA
0no label
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
2,477,410
AATGTGCCAGAGTTGACTGGCGATCGCATCTATCGGAAAACTGGTTATGGTAAGTTGCTTAACTGTGTTATCTATCTTTACGTTGTATTGACACGGTACTGAGCCAAAATGTGCAACTTGAAAGTTGTGCATTTCGGCTCACACTTGTTT
0no label
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Microcystis aeruginosa NIES-843
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
1,622,140
AAAATTGTCTGTTTTCGATCATAGTTTTATTTGGTTTCCATCCAATTGTCACCGGCTTTAATTTCTACCAAGAGAGGGATCGTCAAGGAGACAGCTTCTTCCATAGTCGTCTTGATTTTTGACTCTAGGGATGGCCATTCTTCCCTCGGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,312,400
AAAAACTTGCTGGTTTTTGCGGCTTGTGGGGTATCACGGATCCTACCAATGTGTGATGTCTCCCCCAGATGCCCAGCTTTAAAATTTCTCTCTTTTGTACTCTGTCCCTTTATTTCTCAAGCCAGCCAACGCTTAGGAAAATAGAAAAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,790,000
CATGGCAGAGGAAAGCCCCCCCACCACCGGACACCTGGCATGTCCACCTGGGGAAAGGGCACTGGCCCTCTCTGGCAAGAGCTTCTCAGACCCCAGGGTAGGTGGACTTTGTGGTTTTCATCTCTGCCGAGCGTGGAGCCCAATCAAAGA
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
3,903,510
GGTGAACATGAAGATCGCTTTCGTCGGGAAGGGCGGCAGCGGAAAGACCACGCTGTCCTCGCTCTTCATCCGTCACCTCGCCGCCAACGAAGCCCACGTCATCGCCGTGGACGCCGACATCAACCAGCACCTGGGGGCCGCTCTCGGCCT
0no label
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Synechococcus elongatus PCC 6301
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
2,470,780
CTCGCAGTTGTTGGGCCGGACTCGGCTGACTCTGACGACGCTCTAGCCAATCCTGAAAAAGCTGCTGGACTTCGACAATGCAACCCGGTGCGATCGCGATCGGGGTTGCAACTTGAGGCTGACCGCCGATGTCGTAACTGATTTGCCAAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,570,600
AAACTTCACTTTCAGGGTGTACTGGGGGTGGGCGTGGAGGGAGGAGGAGGAGGGCGGGTTGTGGTCCCCGTGTCTGTGCGCCTTGGCTCATTGCTCCCCAACACTGACAGCCCCTCACCCCATTGTCGGATCTGTCCAGGGCTTCTAAGC
11
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Sterne ASM816v1
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
4,176,770
GCCATTCTGGGAGATGTTTTCCAAAAGAAAAAGAGCCGCTTTACTGCGACTCTTTCATAACCATTACTCACCTTTATATGCTTTCATATAAATTTCTTTCAGCTCTGAAATGAGAGGTAATTTCGGATTAGCTGTTGTACATTGATCTTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,594,000
TGTCCCTCAGAGTTAGAACCAACAGAGTTTGTAGGTTTTCAGCTTCAGTACCTAGGTCACCAGCAGTGTCATCTACCGAGAAGGCAAAGCCTGGGGAAAAACAGGTTTGAGGAGGCAAATAAAAAAATCTCTGTTGCACACGTTACATGT
11
G000007205
ASM720v1
GCF_000007205.1
PRJNA224116
SAMN02602979
null
2003/07/25
ALTANA Pharma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1
637,000,071
RS_GCF_000007205.1
Monoisolate
Complete Genome
Full
na
Major
182,082
83,558
Chlamydophila pneumoniae TW-183
strain=TW-183
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Chlamydophila pneumoniae TW-183
Eubacteria
Chlamydiae
1
1
1
1
1,225,935
1
40.58
1,225,935
1
1,055
372,698
89.583869
99.49
0
0
219
yes
yes
yes
20
high
93,210
AACGCGCAGGATTTGAAGTTCGTGACGTGCACGCAAGTCATTATGGACGTATTTGTCCTATTGAAACTCCTGAAGGTCCAAATATTGGTCTGATCACCTCTCTTTCCTCTTTTGCTAAAATTAACGAATTTGGATTCATTGAAACTCCTT
0no label
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
59,280
ATCGGGTCGATCACTTGCACGTCTAGTGCAATGTTGTTGTTGTCACTATCAGAGAACAATGCATCTTGGCCAACTGCCAGATCTAAAGTGAGATCCAAGCTGTGTGACGTGCTTGGTGTGTTCAACTGCGCTCTGATGTTGTCGGCAACA
0no label
G000006605
ASM660v1
GCF_000006605.1
PRJNA224116
SAMEA3283089
null
2005/06/27
Bielefeld Univ
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1
637,000,085
RS_GCF_000006605.1
Monoisolate
Complete Genome
Full
representative genome
Major
306,537
38,289
Corynebacterium jeikeium K411
strain=K411 = NCTC 11915
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Corynebacteriaceae
Corynebacterium
Corynebacterium jeikeium
true
Corynebacterium jeikeium K411 K411 = NCTC 11915
Eubacteria
Actinobacteria
1
0.996
1
1
2,476,822
2
61.35
2,462,499
1
2,137
751,284
89.378688
100
0.68
0
319
yes
yes
yes
20
high
507,650
GATTTCGCCTCCGGCCGGCCGTCGACGGCGAAAGCTGCAATGGGCAGTGCCGGGCCGGAGGCGGAGACTGAAAAGCCTAGCCAGGACTCAATGGCGGCAGCAGCAAGCTCTGCGGGAACGAATGGCAATTGGATACCACTGGCTTCGGTG
0no label
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Deinococcus radiodurans R1 ASM856v1
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
2,061,930
CGTGCCAGCACTGCTTTCCATCTTCACGATGATGCGGGGTCCGTCTTTCGCCATGATGCTCTCCTTTGCGCAGCCTTCCCTTTGGTCGCCAGGGACCGGGAAAGTTGCTCCCAGCGCCTGCCGGAGCAGGAACAACGCTGGTAAAAACCC
0no label
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
2,479,360
CAAAGAACAGTCACTGGAAAGTCTGGTCCGACAGCTTCTGGAGATGCTGGAAATGGTCACTGATATGGAATCAACCTACCTGACCAAAGTGGATGTCGAAGCGCGCCTGCAGCATATTATGTTTGCCCGTAACAGCCAGAAAATGCACAT
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
3,183,960
CGGCGAAGGCCGCCAAGAGCGAGCAGACCCGCACGCTGATTCTCGAAACGGCGCTCCGGCTCTTCGCGGAGCGCGGCTACGACCGGACGACCATGCGGGCCATCGCCCAGGAGGCGGGCGTCTCGGTCGGGAACGCCTACTACTACTTCT
0no label
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Methanosarcina acetivorans C2A
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
2,603,380
GGTATCACCATAAAACTCAGTAGTAGCTTTCATGTCATAAATTTCATGACCATGATGATGTCCACCCGTCGTTCCAGTATAATGACCTATAATGTATTTCATACATTTCTTATATATTTCATTTTTAACATCCAAACAGTCGCTACAAGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,973,250
TTCAGATAAACGCAAACGGACCATCTTCAGAGCGTGCTGCGGGGCACATTTCTTTGGCAGATGAGCTCATGTTGACCTGGGATCATTGTAAAGGATTGCTGAGGGCACAGCATGGGGGTGTTGGGGAGGGAAAATGACACCTGATCCCAA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,790,850
AGCCTCCAGAGGACCTGCTCAGCACACAGTGTGGGAGCACCCTTAGGATGCCAGGCTTTGAATCTAAAGCTTGTGTCATAGCCCAGGGTAACTGTCTAACTTACTTCTCCAGCCTGATCTTCCTCTTGACCTCTGTGTAAGAGGCTATTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,323,100
AACTCCTGAGACTTAAACTAAATGAATTTATGTCTTTATTTAGCCCAACGGGGATGTAAAAATACCAGGCAGAGCACATTACAGAAAACCCATGATGAGTAGTAACGTAAAATGTGTGTTTCTGCTGCCCAAATGGAAAGGCCTGCAGCT
11
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Pyrococcus furiosus DSM 3638
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
377,650
ACGAGTACGTAAGGATACTCTACGAAAAGATAAAGAAGTACGTTGATGTTCCAATTAGCATTTTAGATCCCTATTTACTCTTAGCCGCATGGAAGGAGTTTTACCTCTACGTAACCAAGCACAAGCTCGACATCCACCTATGGACGGAGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,566,850
CTGGGCAACAGAGCGAGACTCCATATCAAAAAAAAAAAAATGCAGCTTTGGGAAACAGTAACTGACACACACTGTTACTAGGAATATATATATTGGTTTGATCTTTATTTTTTTTTTTTTTTGCCATATTTTAAACACAATGGTTAAAAT
11
G000009845
ASM984v1
GCF_000009845.1
PRJNA224116
SAMD00061121
null
2007/12/15
The University of Tokyo, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/845/GCF_000009845.1_ASM984v1
637,000,202
RS_GCF_000009845.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,768
100,379
Onion yellows phytoplasma OY-M
strain=onion yellows
null
Bacteria
Tenericutes
Mollicutes
Acholeplasmatales
Acholeplasmataceae
Candidatus Phytoplasma
Onion yellows phytoplasma
true
Onion yellows phytoplasma OY-M onion yellows
Eubacteria
Terrabacteria
0.93
1
0.9
1
853,092
1
27.76
853,092
1
956
230,005
79.395423
98.57
0
0
124
yes
yes
yes
20
high
514,410
TTGTTATAGAACTTTTAATATAACCTATAATACTACCAAAAACATCAATAAAAATTTTTAATATTTGCATTAAAAAATCAAACAATGAACTAAATAATTTTAAAGGATAAATTAAAATTATTAATTGTTCCCATATAAAAACAAATATAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,369,600
TACTGGCACGCGGGGTCACGGCTGCTCTGCCTGTCCAGCCTCAGCTTCCCCTTGAGTAAAATGAAAGGCTTGGCTAGGTGGGCTCTGCAGGCCCCTTCCAGCCCTCGCAGCTGGGGATTGCAATCGTCACCTTATTCTAGGTTGGTTTTC
11
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
2,100,930
TTAGTCAAGCTAATTTGAGCGGATGTAATCTCAGTCGTGCTAATTTAACTGATGCAGACTTGAGTGGAGCTAACTTGAGTGGAGCTAACTTGAGTGAAGTCAACTTCATCGGTGCAGACTTAATTAGCACCAATTTAAAACAAAGCAATC
0no label
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Sterne ASM816v1
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
3,484,000
TCGATGATTGTTAGTGCTGTAAGTATCATTCCTAGTATCAGTGCTAACTTTGCCAATTTGTTTCCCCCCTTTCGTTCTTTCTATATTTATTATACCATATCTATTTACCTAAGTAAACAGATATGGTGCGATTTCTCTTTAATTTTATTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,040,350
CGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTTGAAGGAAAAAAAAAAAAAGAAAATTGGCCAGCCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTGGAGAGGCTGAGGCAGGTAGATCACCTTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,365,000
TGCATCTGCAGTAATGTGTGTGGGGGTGAGAACCATCACCGAGTGGCTTTCGCTAAGTTGAATGAAATCCATTTTGAATCACTGCATTCATTGAAATCCCATGTGAGCCAACTGTCCCTTACATGCCCTTCCTCACTTAGGCCTTCGGCA
11
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Yersinia pestis CO92 ASM906v1
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
3,485,690
GGAATGTAACGAAATAGCACCGGAAACGGCTCTCGCAGCATTGGCTATCGTACAACTTGATTACCAACGTAAACTTCGCCATAAAGAATCAGACTGAACCTACTACTTCTGATGTGTACTGAGGCGACTCGGCACGACATCGCCTCTGCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,269,550
GGAATAGAGAGCTTTTCCTGAGATGCTGGGAGCTCTCTACTAACCATTTCATTCAGTGACTCTGAAGTCCCCAGAGAGGGACGCATCCCAGAGCAAGGTCCGGGCCCCCTTAACGTGGACACCGCTGTGATTTGTTTGCAGGACTCCCTG
11
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Geobacter sulfurreducens PCA
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,587,820
CCTGATCGGGTTCATGGAAGGCCGTGATTTCTTCGGATGGGGAGACGGAAGAACCCTTGGGTATCTCTTTTTCTGCGTGGGAATATCGCTGTCGATCCTGGGTGTACTTCTGATGCGCATCTTCAGGAACCGGGGATTTTCATGAAAGAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,485,500
ACCAAGAGCTCACATACCGAGAAACTAAAAGGGGCCCCAGAGAACAACCTCTCCCATACCAGAGCTGCTCCTCCTGGGGCTGAGACAGGCCCTGCGCTTCGCCTGCTGGATGTGGGGCAGGAGGATATCCAAGCACTGCCATCCTGCCGG
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
3,284,580
CCTCGGCGTACGTGTCCAGGGCGCGGGCGGGCCCGGCCTTCGGCGCGGCCTCGCCCGGCTGGCCGGCGGCGGGCTTCGCGGGTCCGCCGGAGGCTCCCGCGCCACCGCCGCCCGTCTCCGCCGCGCACCCGGAGGCGACGGCGGCGGCCA
0no label
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
923,780
GGAAGAAGCCGTAGCGCACGGTGATGCGGTAGAAGCCCTCGGCCAGCCCCTCCACCACCACCCGGTCGCGGGCGGAAACGCGGGGAATGTCCTCGGTGATCACCGTCAGGAACACCACTCGCTGGTGCAGCACCTTGTTGTGCTTGAGAT
0no label
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
822,120
CATCTAGCGCCTGAGGCTTCAGAGGGTCGTGTCATGGTGTGAAGTTGCCACTCAATTAAACAACGAGTAGTACGCTTTATACTGGCATTGGCGATAGCTCCCATGAGCTCTGGTAGTTCTGTCGGCGCCAATGCTGCCATATTTTCTTTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,058,700
GGAGAGAGAGGGCAAGCCTTGGGGAATGGGAAACCAGAATGCTGCCCACAGTGAGGGAATCTTTGGGTTGGCTCCGCCCTTGGACTTCTCTAATACAGAAGCCAGACAAATTTCATTTTTGCTTAAACTGTTTTGAGTGGGGTTTCTTCC
11