#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
2,635,100
0
CCTTTTGCAGGTAATCATCCAGTTGGCCTTTACGGCGGGTGGAGTCCCGGTCAATGCGCAGCACTCCACGACCCGGAAACATCTCCTTCAGGCTGTGCTCTAACTGCTCGGTACCCACACCATGTGAAATTAAGTGCGTGGAGCCGCAGG
50Idiomarina loihiensis L2TR
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,934,550
1
AGCATGTCTGAGAGCCATGTGGACCTGGACAACCTGGGAGCCTCCTGCTGCAGTGCACGTGGGGCCTCGGGCTCCAGCCAGTGCAGCCTGGTGACGGGAAGGCCCCTTGGCCACTCTGGGCCGTGGGGAGGGCCGTCCAATCCCATCCTG
120homo sapiens
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
2,722,330
0
GCAAAAAACGCGAACCCGACGGCTCCACCCGCGAATTTCCGGTCGAAGACCACGCCTACCGGCTGTACCGGGCAACGGCAGGTGACCGGCCGCTGCCACCGGCTTTCGTCACCGCGCTGGACATCTCCGCGCTCGATCACATGCGCATGC
63Methylococcus capsulatus str. Bath
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
2,257,710
0
GTCGGCGCGAAGAGCGTCCAAGATGCAATCAACATTGCAGTTGCGGAAGTCGGTACGCGAACGAAGTCAACAGAAGCACGATCGTCGGAGATCCCCGTCCAAGATGTTATCTATCCCTCATATGTGTATGAAATGAAGCCGGCGCTCTGT
45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
G000009305
ASM930v1
GCF_000009305.1
PRJNA224116
SAMEA3138199
null
2006/06/28
Penn State Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
637,000,130
RS_GCF_000009305.1
Monoisolate
Complete Genome
Full
representative genome
Major
382,638
212
Helicobacter acinonychis str. Sheeba
strain=Sheeba
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter acinonychis
true
Eubacteria
Proteobacteria
1
0.994
0.9
1
1,557,588
2
38.17
1,553,927
1
1,547
470,618
89.011857
99.12
0.7
100
271
yes
yes
yes
20
high
264,940
0
TGGCTAATCCCCCTAACGAAGTCTCTTTGTATTTTTCATTCATGTCTTTTCCGGTCGCATACATCGTAGCGATCACTTCATCTAAACTCACTTTAGGCTTGTATGCATCTTCTAAAGCCAATTTAGAAGCGCTGATCGCTTTAATTGCCC
46Helicobacter acinonychis str. Sheeba
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,423,650
1
CTCCACCTCCAAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACGGGCACCCTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGGTGGGGAGGCGGGATATTGCCATGTTGCCCAGACTGGTCTCAAA
120homo sapiens
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
2,052,180
0
CAGTCTATAATATTTTAACATATTTTTTATCTATTTAGGATAATTTTCGGATAGCATTGAAAGCAAATTTCAAAAGTGCAGATGATCCATTAAAAAAAAGATAGGCGTCTGCCTATCTTTTTTATGCTTTTAAATCTTCTGATAACGTCT
55Macrococcus caseolyticus JCSC5402
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,840,150
0
TTCACCGCCTGCCTTTTGGCAGCTCCGCCATAAGCAAATGGTGGGAGGCCCATCTTTCAGACCCACGTGATCTTTCTGGCATGTTGGGCAATCTGGATAGCAAAGGCGTGGCAGTTACACGTGCCGTGGGTTCGCAGGTTGCGCATCGCG
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
3,128,840
0
TTTCATTCACAAAGTTCATATCGACTGATGGATACACTGTCGTAACTGTTTCTTCTTCATACACCACATTCAAATCATCATTGTCATCGTAGGTCACTTGATAACTTGGCGCTTTGGTAGTTGTCAATGTGTTGAGTATGGACTTGCCTT
37Enterococcus faecalis V583 ASM778v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,579,050
1
CGCGAGGCAAGGCTACAGGTGCATCAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGTGAGTGGCAGGGCTGGGGAGGCCCGGGGGGCACGGGCGGGGTCGGGGCGTGGCAGCCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,852,800
1
GTGCAGCTGAAAGTGATATCTTCAAAGTCTCTTTCCTCCCACTTTGGGCTGTGTAGGTAGACACGGGTGTTCTGGTTGAGCCCAATGTTTCTCGTTCATTACTGGCTGCTGTGATTGCGATGGGGAGACAATTACTCAGTTTTGTTCACG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,210,050
1
GGCATCACCTCCCTCTTCAGTTGCACAAAGTGTGCGTGGCATCCTCACATCCCATCTGCCTCAATTTCGCTTTTTCTCTGAACACTTTTCACCATCTGTCTGAAGCACACACACACATTTTATTCACTTCCCCATTCCCATGCATGAATG
120homo sapiens
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
1,875,640
0
CCGTTCCCGCCTATCTCTGACCAGCGTCGACATGGGCCTCGTCCTTGGTTCAGGATGGTCTGCTGGAGTTGATCGCCTGGGCAAGACTCTTGGGAGGATCCCGCTGAGTGAACTGCCCGGATTCTTTGCACCTGTTGTTGCCGGACACGA
77Propionibacterium acnes KPA171202
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
2,504,450
0
TCAACCAGCCTTTTTTATCCATTTCATTCATAAGATAATTGTATTTTTTGTAATTTATCTTTTCTAGATTATATGCTCTAAAAATCATAGCAGATATAGGTACAATCCATTTTTTCTTTAGTTCTACATAATAATCTAAATCTTCTGGAT
28Clostridioides difficile 630 ASM920v1
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
4,433,390
0
GTTTTTTATTTTAGTAAAAAACTCGTCTTCTTGTGCTGACGATACGGCAGTAGTATTGGGAAAGTCAGTCATAAATGTTACGAAGAACGATCTCTTACGCCAAATATGCTGCATAGAGCCACGACCAATAACACGCCGGAACCCAAAAAC
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,092,650
1
CCACCTCGGCCTCCCAATCTGCTGGGATTTCAAGCATGAGCCACCACGCCGGCCGAAAATGTGCTGTTTTAAAGTAAATACAAAAATTAGCCGGGTATGGTGGGGCATGCCTATAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATT
120homo sapiens
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
610,610
0
ATTTGGAAGATCTCTATTCCCTGGTCAAATACATCTTTGAACTCTTCAACGTTTTCCCACTTTCCAAATCTCTCCAGCAGGTAGACTATTTCATAAGGTTCGATGGAGTAGTTGGTTGAGAATGGCATTATTTCAGCTAACTTCATCGTC
80Pyrococcus furiosus DSM 3638
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,304,800
1
GAGTTGGAGGTCCTGTGTGGCCTGCTGATTCCTCCCTGGATTCACATGTCAGCAGTCCTTCCACACCTCCCTGCAGTTCCTACAGGACACTGACTGTGCACCTGCCACCCCACCCATAACCGCGTGGCTCACTCCCACTTCCTTCAGGTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,551,350
1
TCGTGTCAGTGATTTTTCAGCAGACCTTCAGAGGGCCACACTCCTCTCTCCTAAATCTCCACCACGACCCCCACTCGCTCTCAGGCAATGGCCTTGCCTCCTAATTCACTGGGAAGATAGAGGCCGCCAGAAGAAAACAGCCACCCAGTG
120homo sapiens
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
1,080,300
0
GCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAATCGGGCAAAGATTGACCAGACAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCTTATGGTAATACTGCGA
85Shigella flexneri 2a str. 301
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,155,200
1
ATCCGACAGCCTGGAGCAGCACCCACAACCCCAGGTGAGTATCTGACAGCCTGGAACAGCAAACACACCCCCAGGCGAGCATCTGACAGCCTGGAACAGCACTCTGAACCACCGGGTGAAGATCAGACAGACTGGAGTAGCACCCACACT
120homo sapiens
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
3,665,480
0
AGCTGGGCGATCCGGTGGGTGATGGTGCGGGTCTTGCCGGTGCCGGCGCCGGCCAGCACGCAGACCGGGCCGCGCGGGGCCAGCACGGCTTCGCGTTGCTCGTCGTCCAGCCCGGCGGTCAAGGGATCGGCGAGGGTTGGCATGGGGTCC
65Mycobacterium avium subsp. paratuberculosis K-10
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,628,850
1
GAAGACTTCAGTGGGCTCCGGGCCGCACCTGGGCTCCTGCAACACAGAGTTGTTGGGCCTTGCCCAGCGATGGCTCCCGCCCTGGAAACCCCTTCATCGCTAAGATGGGCCCAGTGGGCACACCTGTCCTGGGAAGGCGGGCAGTGAAGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,262,550
1
TACAAAAATTAGCCAGGCGTGGTGGTGTGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCTTGCCATTGCACTCCAGCCTGAGCAACAACAGCGAAAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,168,250
1
GCCCACACCCCCAGGTGAGCATCTGACAGCGTGGAGCAGCACCCACAGCCCAAGGTGAGCATCTGACAACCTGGAGCAGCACCCACACCCCCAGGCGAGCATCTGAACGCACGAAGCACCCACACCCCCAGGTGAGCATCTGACAGCCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
493,050
1
CGTGGAAACAGTGAGGGAGGTTTGTGTGGGGCCAGATTCCTCCTCTGGGCACTGACCTGCTCTCCCCACTCCAGGTGGTTTCACCCCAACATCAGCAGGGTGGAGGCGGAGAAGCTGTTCCTATCCAGAGGTCAGCGTGGGGACTTCCTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,495,850
1
CCGCTCCAAGTGCAGCATGTTTGAAAAGTTCAGATGGTTGTACCAGTACAATTACTGATTGATAAGGACATATGTTCTTTTCCAAAAATCATTTATTGACCCTCCAGTGTGGGAACAGCCCCAAGCTAAAGAATTTATAACGAACCTGGA
120homo sapiens
G000008525
ASM852v1
GCF_000008525.1
PRJNA57787
SAMN02603995
null
1999/12/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/525/GCF_000008525.1_ASM852v1
637,000,132
RS_GCF_000008525.1
Monoisolate
Complete Genome
Full
reference genome
Major
85,962
210
Helicobacter pylori 26695
strain=26695
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter pylori
true
Eubacteria
Proteobacteria
1
1
1
1
1,667,867
1
38.87
1,667,867
1
1,579
514,109
90.817493
99.36
0
0
275
yes
yes
yes
20
high
1,438,060
0
TATCGTTAAATTTATAAGCGTGTTCCTTAAGGAAGAATTTTAGAATGCGTTTTAGCAATGATCAAAGGTTCAGCCTGTTTTAAAACACAATCTTTAGTGATACGCACTTCCGATCCTTTAAGCTTGGGTAAATCAAACATAATATCCAAA
48Helicobacter pylori 26695 ASM852v1
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
923,650
0
TCCTCAGCTTCCTTGAATATCTCTCTCAATCTTTCTTCGCTCTCTCCATAGTACTTGCTCATTATTTCCGGACCATTAATTGCAATGAAGTAAGCATTAGCCTCATTGGCAACAGCCTTAGCCAGCAAAGTCTTACCAGTCCCAGGAGGA
80Pyrococcus furiosus DSM 3638
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,129,050
1
CACTCAGAGGCTGTTTTGATTGGCTCATTTCAGCGGAGCTCATTATTTTTACAGGGAACAATTTCTAACCATTTTCCTTGTCTCTCAGGGCGGTTGCTACTAGCTGAGTTACTCGGGCCGTTATAAATACATTATCAGACACATTCAACA
120homo sapiens
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
423,020
0
CCAATTATGGCTCTATCCACACTTATAATAATACCTATTATGTTTTTCATAACTAAGTATTTGGGAAAACTAACTAAGAAGTCTTTTGTAGAAAGACAACAAATCTTAGGTGATTTAAATGGGTTAATAGAAGAAACTATTGGAGGACAG
30Clostridium tetani E88 Massachusetts substr. E88
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,562,600
1
GGTCCTGGCCTAGGTTGCTCAAGCCTCTGAGCATCAGTTTTCCCATCTGTAAGGTGGGCACAATCACAGCACCCACAACAGGACTGGGAAGGCCACACAGCCCCCAGTTGCAACCCAGGGGTGGGAAGTGAGCAGCACAATGCCCAGCAC
120homo sapiens
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
1,892,540
0
CCGCTCTCGGTGCAGGCCAAGGTGCTGCGGGCGGTTCAGGAGCAGAGCTTCGAGCCGGTGGGCAGCAGCAAGCCCCTGAAGGTGGACGTGCGCATCATCGCCGCCTCCCACAAGGACCTCCAGAAGGCGATCGCCGACGGCGCCTTCCGG
4Azorhizobium caulinodans ORS 571
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,483,450
1
TCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAGCCACCGCACACAGCATTAAAGCATGTTTTATTTTCCTACACATAATGAAATCATTACCAGATGATTTGACATGTGTACTTCATTGGAGA
120homo sapiens
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
2,296,970
0
CTGTTTATAAGTACTATGCTCTGACGCATAATCAACGATTTCTGGATTAGCTGTCACGATAAACAAATTATCCTCAGTCTCTTGTGTGAAAAATGTTTTGACATGTTCAATCATATCTAACATGGTTACATTATTAAATTGAACACCTAA
89Staphylococcus haemolyticus JCSC1435
G000007785
ASM778v1
GCF_000007785.1
PRJNA57669
SAMN02603978
null
2003/03/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/785/GCF_000007785.1_ASM778v1
637,000,101
RS_GCF_000007785.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,185
1,351
Enterococcus faecalis V583
strain=V583
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Enterococcaceae
Enterococcus
Enterococcus faecalis
true
Eubacteria
Firmicutes
0.99
0.991
1
1
3,359,974
4
37.38
3,218,031
1
3,271
1,000,353
87.714339
99.53
0.31
0
309
yes
yes
yes
20
high
3,062,800
0
AAAATCATTAATACCACCAGCGGAATTCGTTCCTGCTGTAACCACATTCGTAATATCTCCGATGATCGTTCCAGAATATTGGTTGCCTCCTTCAAAATCTGCACGACCCGCACTATACAACTGTGTATTTAAATTTGTAGTAATTCCATC
37Enterococcus faecalis V583 ASM778v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,256,850
1
CTCCTAAAGTTTGAGAACCTCTGGTCTAGAGGAATGGTCACTGGGATGAGCAGAAGCCGCCATCTAGGGCAGCACACAGCCTCCAGCCAGGAACAGGCGGGTGGGTCACACACACAGACTCACAGCCTCCAGCCAGGAACAGGCGGGTGG
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
5,870,020
0
CCCTTGCCGCCGGCGTGAGCTACACGGAGGCCTATCCGGTCATCGTCCGGAACTTCCCGCAATTGCGCGAGCTCTGGGACCGCATCGGCGGCGAGCAGGTGCGCAACATGGGCACGGTCGGGGGCAATATCGCCAACGGTTCGCCGATCG
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
641,100
1
CAGGGCTTGCAGGCCTGGTTGTCGCCTGGGGAGAAGTGCCCTGGAGGGCAGGGGGCACAGTCTGCAACAAAGATAGGGTGGTCAGGGGCTGCCCACAGGCCCCGGGTGCTGGGGACATGGGGCAGAGCCTGTGGGGCAGGCACTTGCCCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,568,650
1
AACACTTTGGGAGGGTGAAGCAGAAGGATCACTTGAGTCCAGGAGTTTGAGACCAGCCTGAGCAACATAGTGAGACCCTATCTCTACAAAAATTAAAAATTAGCCTGGCATGGTGGCATGCGCCTATAAGCCCAGCTACTTGGGAGGCTG
120homo sapiens
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,508,000
0
GATGCCTTCCTCTCCACCGACCGCCACCTGAGCATCGAGGAGCTGTACCTCAAGCTCAGGGCAAAGCACCCGAACATTGGTTACGCCACGGTCTACCGCACCCTCAAGCTGTTCGCGGAATCGGGCATCGCCCGGGAGATGCAGTTCGGC
43Geobacter sulfurreducens PCA
G000009205
ASM920v1
GCF_000009205.1
PRJNA57679
SAMEA1705932
null
2006/09/20
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/205/GCF_000009205.1_ASM920v1
640,069,308
RS_GCF_000009205.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,563
1,496
Clostridioides difficile 630
strain=630
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptostreptococcaceae
Clostridioides
Clostridioides difficile
true
Eubacteria
Firmicutes
1
0.998
0.9
1
4,298,133
2
29.06
4,290,252
1
3,829
1,209,268
82.891874
99.51
0.37
0
340
yes
yes
yes
20
high
1,261,260
0
AACGAATGTTGTGAACCTTTCTATGAATTAATTATACCAAATGATATAGATTTAGTACTTTGCTTACAAGAAACAGTTAGCACATTAATAAGTGAACAAATAGTAGTTTTAGCATCACCAAATCCAATCCAACCAAGACTTGTTGATACT
28Clostridioides difficile 630 ASM920v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,195,250
1
CATGTGGCAAGCTCTGATGACAAGCCTGTGTGACAGGTATTGTTGTCTGAGGCAGAGAGTTGCTAAATAATCACATGCAATGGGTGGAATGCCGGAGAGTTTGGTTTTAATTGATCATCTTGCTGCTTGCTTTCTATCTGTCCCATCTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,739,050
1
TTAATCCTTAGAGATTTCCGAGTCAGTAGAACCTCCCCATTTTGGACCAGGAAAGAATAGAGAATTCTGACATTACATAGCATTTAATTTTTTATTAATGTTTTATTTTTAAGTCATTTCAAGATTTCAGAAAAGTTGTAGGAATAAAAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,413,750
1
ACACCTTGACTTTAGCCCAGTGGGACCCGTGTTGGGCCAATGACCTCTAGAACTGCAAGCTCATAAATCCGCGTCCTGCTGAGCTGTTAGGTTTGTGGATTTGTCACTGCAGCGATGGGATACGGGTGCAGTCAGGGAAGCCTCAGAGCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,546,950
1
CCTGACTTATTAAACCAGCCTTCTAAGTTACGGCTGCACTGGGCATGAAGCACCAGTGGATCCTGCTTATTTTTCCCAAGCTAAAAAAGTAATTTCAGAAGCCACTGTATTTTATGCTGTAGAACTAATACTCACTAAAACACAATGCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,504,200
1
CTGCCAAAGGGCACTGCAGTCACTGCAGCCCAAGCAGCTGCTCCCCTCTTTGGAGAGAAAGTCACAGATCCTTGAGTTTGGTTTTCTTTGGCTCTGCTGCTGTGAAGCAAGCCTCAGTCCTAGATTCTTTGACCAAAGGAAGAAAGAATT
120homo sapiens
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
824,590
0
TTTCAAGCAAGTACCACTGTTTGCGCAGAGTTATTTATCAGCTTATCCTAATGCCAGTCTGTTATCTTTTTCCAGTGATGATAATGAGACCCCTTACCACTTTAGCCAGAATGCAGACTATTTTGAGTATTGTGCTAAACTTTTTGTTGA
92Streptococcus mutans UA159
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
250,640
0
AAGGAGAGAACAAAGCTCTCCTGGAATAATTTCAGGGTTAGTGACTGGTGTTTCCGTTTACCTTCTGGTATAATTTTACCAAAATTCACTCCTGATTCGGTTGTCTGCCTGATGATGTAACTGAGTGGCTTTGAGAGGTTTGCCCCAGTT
80Pyrococcus furiosus DSM 3638
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
649,090
0
TAGTGGCAACGACGGCCGTGTTGGTTGCAGTGTTTGTACCAATTGCGTTTTTACCTTCAACAGCCGGGCGTTTATTCCGCGAGTTTGGCGGTGTGCTTGCGGCTGCAGTGGTCATTTCTTCTTTTGTTGCTTTGTCTCTGGTACCGGCTT
50Idiomarina loihiensis L2TR
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
2,174,380
0
GTCGACATAGCCGAGCAATTTTGCCGGTCGGACGACCGCTTTTCGCTCGTCAAATGCGAAGAACATGTAGGCGCGATAGCGAACTTCGCGAGAGCAGTACAGCTCGGCGCAGAACGCGGTGAATATTTTTGCCTGCGTGCATGCGATGAC
86Sinorhizobium meliloti 1021
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
624,910
0
TAAAATAAAACTATGGAAAAAAGAATTAGAGAATTGACGTCGTTACTGAATCAATATCGTCAAGAATATTATACCAATGATAATCCAAGTGTTAGTGATCAGGAGTATGATAAACTCTATCACGAACTCATTGACTTAGAAAAAGAATAC
94Streptococcus uberis 0140J
G000010985
ASM1098v1
GCF_000010985.1
PRJNA224116
SAMD00060965
null
2010/03/05
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/985/GCF_000010985.1_ASM1098v1
646,564,525
RS_GCF_000010985.1
Monoisolate
Complete Genome
Full
representative genome
Major
639,282
197,162
Deferribacter desulfuricans SSM1
strain=SSM1
null
Bacteria
Deferribacteres
Deferribacteres
Deferribacterales
Deferribacteraceae
Deferribacter
Deferribacter desulfuricans
true
Eubacteria
Bacteria
1
0.996
1
1
2,542,933
2
30.31
2,234,389
1
2,468
805,380
93.314963
96.55
1.72
0
345
yes
yes
yes
20
high
14,560
0
GCATTTAGAAAAAATTAGAAATCTACAGGATAAAACAGGAGGTTTTACTGCTTTTATCCCTTGGCCATTTCAACCAGATAACACTGAGCTTGGTGGAGAGCACGTGACCCCTTATGAATATTTAAAAGTTTTAGCACTTTCTAGAATATA
33Deferribacter desulfuricans SSM1
G000009825
ASM982v1
GCF_000009825.1
PRJNA224116
SAMD00061074
null
2004/12/30
Kao Corporation, Biological Science Laboratories, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/825/GCF_000009825.1_ASM982v1
637,000,019
RS_GCF_000009825.1
Monoisolate
Complete Genome
Full
representative genome
Major
66,692
79,880
Bacillus clausii KSM-K16
strain=KSM-K16
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus clausii
true
Eubacteria
Firmicutes
1
1
1
1
4,303,871
1
44.75
4,303,871
1
4,304
1,270,194
86.940919
98.67
0.33
0
373
yes
yes
yes
20
high
3,379,090
0
AGCAAACACAGCGATTGTTATTGGTTTCACCGTTCCCACTCCTTGCTTTAGTACTCCTTTGGATTTGTATAAATGTTTTTCATTTAGCTTACAACGAACAAACTTCCAGCCAACAATGTTAGCCGGAAGCCTGTTCCCATTAATCAACAC
8Bacillus clausii KSM-K16
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,098,800
1
CAGCCTGGGTGGGCACCCACACCCCCAGGTGAGCATCTGATGGTCTGGAGCAGCACCCACACACACAGGTGAGCATCTGACAGCCTGGAACAGAACCCACACCCCCAGGTGAGCATCTGACAGACTGGAACAGCACCCACCCGCCCAGTT
120homo sapiens
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
673,140
0
GCTGGAATACGGCTATCTGGCTAATCCGCCCCTGATTCCCTTCATCTTCCGGACCGTTCCAGGAATAATCCAGCAGCCAGGCCGGGGCCTCTGCCAGAGTGATTTCCCGGCAGGCATGTTCGGTGTACCCATCAAGTTTGCCCTGGTACA
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
93,470
0
AGCAGTTTTTCCGTTTTGCAACGAGCCTAGTGCAAGTATGGGAGGCGGCGCGAACCACGGTCGCTTTGCCCCCGGGACGCGAGGCCATGGTGACGATCGGTGCTGAGCTCAGCCTGTGGAATCCGCTGTTGAAGCATTGGCTTTTGTGGA
86Sinorhizobium meliloti 1021
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
804,700
0
TAAAAAGCCTTCAAGAAAATCCAGTACAAGTCAATACTACTGAGTTCATTGAGAAAAAGAAGAAGAGTATAGAGGAGAAGCTTAAGCAGAATAAGAGGTTATCTTTTGAAGAATTTTTAATACTTTATGGGGAAGTAGATAATAAGGATG
97Sulfolobus solfataricus P2
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
4,235,660
0
GCACCTGCGGGCGATCGTGCGGCAGCGGGCGCAACGGGGTGGCCGCCGGGGCGGCGACGAAGCGGTTGCGGTAGCTCCCGCGCTCGCTGCCATCGGCGCCCAGCAGCTGCGCGATGCCGGTGTCCAGATTGTTGCGGGCGCTGTGCTCCA
113Xanthomonas oryzae pv. oryzae KACC 10331
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,939,900
1
GCTGCTCTGTCCAGGGTCTGGAGCAGGGCAGGTGCACAGCAAGGCAGCTCACTGCACGGTTGTTTGCGGAATGAAACGACTTTGCCAAAGCCATGGCCGCAGACATACGATGCTCTAAACATGTTTGTTATAACCATGTAAACACGCTTC
120homo sapiens
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
3,616,990
0
CATAACGTGAGAAAGGCTTTCCATCCGTATCATGATCAAACCAATATTGTCGAAATTCAGGCCCTATCTTTTCCAGTAAGTAGCGCATTCTTCCTAAGTACGGATGTAATTTTAAAATAGAATGATGTGTTCGTTTTTTTATAAAAAATG
7Bacillus cereus ATCC 14579
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,447,800
1
ACTCAGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGTGGAGGTTGCAGCGAGCCAAGGTCTCGCCACTGCACTCTATCCTGGATGACACAGTGAGACTCTGTCTCAAAAAAAAAAAAAATTAAAGAAAAGAAAGTGCATGTTAA
120homo sapiens
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
1,648,010
0
CCCGAGCAGGTCCAGTTCTACTGCCTGGCCTACAGCAGCACCGCGCTGACCACGGTGGCCCGGCTGCCCCATGTCGGCGAGGTGGTCGGTCCGACCGACCCGTACGGCGTCCGCCGCACGGTGGCCGAACTGCTCGCGTTGGTGCGGGAG
65Mycobacterium avium subsp. paratuberculosis K-10
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,488,150
1
AAAAAAAAGTTTACCACGCAGACTGGATCAAAAAAGCCTGTCTTCTTTTGGTTTTCCTTCCATCTAACTGTATCCCTCCTTGGTTCTAGAAGCACACATCTGACCACTTGTCTTTCCTCTTTCTCTGTCATTCCTGTTTTCCACACTCCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
117,300
1
TCAAAAATAAATACATAAATACATAAAATAGGGATAATAATACCTCCCTTGTTTGCTTGCTCCCTTGCTCCATTTGTAAGAAATAAGTGATATAATATAGGTAAAAATACTTAACCTCATGCCTACCACATAGTATAGCACAATAAATGT
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
3,993,860
0
CGATCTCGGACAGGATCTCTTGTCCGGCGTTCTCGTTTGCCCCGGATTTGCGTGCCCGGGCGAAGACCCTCCGGATCAGCCACTCGGCGCCGAGGCCAACGGCAATCAGAACGGCCAATATGCTGACCACCAGCCCGGGCCTGCCCGAGT
86Sinorhizobium meliloti 1021
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
2,294,370
0
CCCTTCGATCGCATTTTCGATGATGTTGTTATTGCTCGATAAGGTCGCCACCCCATCCAGCACCACCATAGAGTCTTGCGCCGATTGCACTTCGGTCATGCCGCCGTAGCCATCAAAGGCACTTTGCGCCGCATTCAAGGCTGCTTGCGC
107Vibrio cholerae O1 biovar El Tor str. N16961
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,699,550
1
AGTGAGGCTCACCGCCCGGTGCCCCTGCCTGAAGCTGGGATTCTGCGGTGGCCCCAGGGTGCCCGTGGCACCAGAGGGGGGTTCAGCCAGGAACCGCAGGGGTTCCTGACCCAGATGGTCAGCCTGTGAGACCCCCACCCAATTCCAGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,760,000
1
AGGCCGAGGCAGGCGGATCATGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAA
120homo sapiens
G000008745
ASM874v1
GCF_000008745.1
PRJNA57811
SAMN02603115
null
1999/12/22
ChGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/745/GCF_000008745.1_ASM874v1
637,000,069
RS_GCF_000008745.1
Monoisolate
Complete Genome
Full
reference genome
Major
115,713
83,558
Chlamydophila pneumoniae CWL029
strain=CWL029
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Eubacteria
Chlamydiae
1
1
0.9
1
1,230,230
1
40.58
1,230,230
1
1,063
373,983
89.578859
99.49
0
0
219
yes
yes
yes
20
high
820,040
0
AATAAGATCTTCTACTCGAAGCAGTTTTGCAAAACCAAACAAAAAAGCCAAGAAAATGCAGCTCTCAGATAAAAAAGCAATTGCTTGAGCCGTTATGGAGGATAAGGGCCAAGCAAGTGGTGTGAGGGGGTTTAAGAAAATTACATATGT
24Chlamydophila pneumoniae CWL029
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,039,100
1
GGCCCCCTCTGTAAGCCACAGTCATCAGGGTCTCAGGGTGGGGGCTGGGTGTCATGGTTTTAAGCCTCTCCACGCATCTCCAATGCACTGCCAGGTGAAAAATGCCGCGTTAAGGTCATCGGAGTGGCAACTGAGATGAACCAATCAGGG
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,125,670
0
CAAGTGATTGATATCAGAATATTCTTATTATATACCCATTCAGTTACAAAATGAAAAAAGAAAACAACCGCCATTGAAAAGGCGGTTGCAGGAAGGCTACATATGGAGACCACGCATTTGCTGTTCGATTTTCTCAAAGCCGCCAGAAAC
15Brevibacillus brevis NBRC 100599
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
1,298,310
0
TTTTTAAATTTTTTAAGAATATTGATTGATGCTAATTTAATTATATTTGAATTTCTTTTTGGTTTTTTTGGAAAAGATGCGTTGACCATTATTAAGATTTTTTCTTTGAAATGAATAGTTTTTGTGCGCTGTTTGAATAGCATTAAACTC
14Borrelia burgdorferi B31
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
146,510
0
CGTGAATGGTAACTTTCTGCCCGCGTTTCCACGCTGATTGCATAATGGTGGAGTGGCCCAGGTTATACACCTGTTCCATGACGTTCAGTTCACACAAGGTATCCAGACGGCGCTCTTGCGGCATTTCGTCGAGCAATGAGCTATGTTTGA
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
661,200
1
GACGACGACTCCTTCGCGCGGCTGGACGCGCTGCTGGCCGAGCTGCGCGCCCGCGAGCCCGCGCGCCGCCGCCGCCTCTACTGGGGCTTCTTCTCGGGCCGCGGCCGCGTCAAGCCGGGGGGGCGCTGGCGCGAGGCCGCCTGGCAACTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,899,800
1
CCAGGTTCAAGTGATTCTCCTGCCTTAGCCTCCCGAGTAGCCGGGACTACAGGCCCATGCCACCATGCCTGGCTCATTTTTGTATACTAATTTTAGTAGAGATGAGGGTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGCCCTCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,978,150
1
ACTCTGGGCCTCCACCCCCAGCTTCAGGCCGGAAGAGACAACAGCTGAGGCCGGTGTGAGAAGCAGATTTCAGGAGAACAGGTCAGGCTTTCTGCTAACCCAGCAGTTTGCATTTTCCCTGATAACAACAAACAGCACATGAAAGTGGAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,022,850
1
GGACTCAGAGGCTCAGGCAGGTAAAGGAACTGCCGGGGGGGCACACACCACAGCAAGCAGGGCTGGCCCGAGGAGACAAAGTTTCCTTCCTGAATAGTAAGTCCAAGCGGCCGTCTGTGCCCCAGCATTGAGAGAATCCCCTGTGCACAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,419,100
1
GATGGTTCTCAATTATGGTCTCTTGGCTATTCCCATAAACATTCCAGCGTCTAAAATGGGGTGGCGCTTCCACTCCAAATCCTAAGAAAATTTCTATTAGCTGCCCAAGTCAGAGGTAAGCCAAAAAAAGGAAAATGAAAAGAAACAGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,759,950
1
CTCCCCCAGCTTTACTGGGCACAGAACCTTGCAGGGAGCTTGCTAAGATGCAGATTTCACTTCTGTAGGCCTGGGTGGGCTGAGGCTCCATGGAGGCCCCAGGAGATTTGAAGCTGCTCTCTGAGGACCTCTCTGAGAACTGCACTGAGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,786,150
1
TCTTCCTCTAGTCTCCAATTACCTATATTTTAGAGCCAGTCCCCAAGGCTCTGTCCATTTTTCTTCAGTATTTTTCTTTTTATTCTTTAGATTGGATGATTTCTACTGATCTGGTTTCAAGTTCATTTACTTATTAACTAATAATTTCCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,391,600
1
CCCAGGAAAGGACCCAGAGGTCTGCACTTCTGCTGGGCTCACATCTGCCAGTCAATGTCAGGAATGTGCTTTGTTTCTGCTGGGTCAGGAAGTTTAGTCACAGTTGGCTTTCCTTATTTGGGGCCTCTGTGTCTCCAGGGTCAATGTGGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
881,100
1
ACAGACGGGGTCTCTCTTTGTTGCCCAGGCTGGTCTCCAACTCCGGGGCTCAAGCGATCCTCCTGCCTCGGCCTCCCAAAGTGTTGGGGTTACAGGCCTGAGGCACCGCGCCCGGCCTGTTTGTTGTTTTCAGACGGAGTCTCACTCCGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,707,650
1
CAAGGAAAGACAAGTGAGAGAAAGAGAACAAGAGAAGAAATGGAAATTCTATAAACCACATTCGTGACACTTAAAAAAGCCCTGCCACCTGAGGCCAGGTAAAATTGTGTTTATTCTGTTTTAAGAAGAGGGAAGCATGAATTATATTCT
120homo sapiens
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
555,620
0
CTTTCCATTTACCACCTTTCAGCGGTAACAAAACTTCCCCTCTGCGATTCAGATATCCGTACCATTCCGGATATTCCGGATCTTTGAAGTGCGACCATGTGTAGTCATGCACTTTTTCAAACCATTCCAGACATTTCCTGTCTCCGGTCA
11Bacteroides thetaiotaomicron VPI-5482
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,252,350
1
TCCTAAGCTGTCAGGAGCAAAAGCAGAATGTGAAAGAACGGCAGAGTCTCCTTGCATCTCAACACCCCATGGTCTACTACCATCTGTGGACTGTCCAGGCCACGCTGAACAGAGAACCAGTAGTACCCAAATCTGTCTAAGACCTGCAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,605,050
1
GCACAGAGGCGTTCACAGGAACTCAGGTTCCTCCCAGTCTGGGGTGCAAATACGTTCAATGGGTCCTCCTCTACTACTGCTGGACCTGGGGCCACCGCAGCAGCAAAGTCAGGAGAGATGGGCAGCTCCATCTCCGACCACCACGCCTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,945,100
1
TATAAAACTGATCTTTATGATGCCTGACACCTGCTCACATCAGCCACCACCACAGCTACCGCCTTGGCCATGCCTATGGGAACCTCTCACCTACCTGAGCCCTCACGGACCCTCCTGCCCGCAGCCTCCCCTCCCCACTCCCTGAAGCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,384,550
1
GAACCTAGGAATTTGAGACCAGCCTGGGCAACATTGTGAGACCCTCGACTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGCTGAGTGTAGTGGTACATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGATCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,255,850
1
GTGCTAACTGTACACCAGGTACTGCTGTAAGTATTATACATATATGACAATATTCCTACAGGATAGGCACTATTATTACCTCCTCTTTTATAAGTGAGCAAACCAAGAGACAAAGGTGTTAAGTAACATCTGTTCAATAAAGCCACAGAC
120homo sapiens
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
2,671,110
0
CTCATCGCCATTGCGGTGGGGCGTGCGTGCGCGCGCCTGATCCTGCGCTGCTGTGGCATGCCCACGGGAGGCCATCGTGGCCACGCCTGACGAGATCGAACGCGAGCTCGAGGAGTGCCGACTCGATGCGAATTGGGCCGCGTTGGTGGA
42Gemmatimonas aurantiaca T-27
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
2,697,630
0
TCATCATAATCTTTATAATTCTTTAACCTTTTAGGTAAATAAAAATCTTTTATATTTTCTTCTAGAAAATCATAGGTTAACTTTTTATCCATCATAATTAAAGTTTCTTTAATATTTGTGGTCATAAAAATATTTTTTCCTTTATTGGCA
30Clostridium tetani E88 Massachusetts substr. E88
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,141,500
1
CACGCAGGGGTCAAGTGGAAGGCACTGCTCTCCAGTGCGGAGGAGGACGCAACTCGGGCAGCAGTGACAGCAGCGCGGCCGCACGCCCAGGCTGCCTTTCAAGCCGCAGAGCAGTCCTGCGGGCAGCTCCCTGTCCACCCAGTTCCGTCC
120homo sapiens
G000007205
ASM720v1
GCF_000007205.1
PRJNA224116
SAMN02602979
null
2003/07/25
ALTANA Pharma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1
637,000,071
RS_GCF_000007205.1
Monoisolate
Complete Genome
Full
na
Major
182,082
83,558
Chlamydophila pneumoniae TW-183
strain=TW-183
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia pneumoniae
true
Eubacteria
Chlamydiae
1
1
1
1
1,225,935
1
40.58
1,225,935
1
1,055
372,698
89.583869
99.49
0
0
219
yes
yes
yes
20
high
1,094,600
0
CTTGTGGATTTTATAACGGTAAAGCCGTTATGACTGTAGAAAAGAAATAAATCTTATCTGATTTTATGGAAGTGCAAATTGGCATAGATTTAATGGGAGGGGACCATTCTCCTCTTGTTGTTTGGCAAGTGCTGGTTGATGTACTTAAAT
25Chlamydophila pneumoniae TW-183
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
564,200
0
ACGCATCTTAAAGATCGTGAGGGTAAAGGCTTTGCGGTCGTCGGCTACGGCAAAGTGGGTGGTTGGGAGTTAGGCTACAATTCGGATCTCGATGTTGTTTTCCTGCATGATTGCCCGGTGAACGTTTATACCGATGGTAAGAAAGAGATC
108Vibrio vulnificus YJ016
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,460,700
1
AGTGAGATCACCAATCATTGTTGCCAAGCATGGACTTGTGCGTGTTTCTGGAGGCTGGTCAGCCTGGCAGCCTCTGAGAACTCTCAGTGCAGAGCCGGATCTCGGCTCAAGGAAGTCCCTCCCAGAGCCATGAAGGGAGGCATGACAGAT
120homo sapiens
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
1,974,700
0
CGCCGTCCGAACCGCCAACCTCAACCGCCCCGCCGGCAAACGTTACCCTTTCCCGACCACAACGGGCAACGCCGTCGCAAGCGGCATGATGGACGCGGTTTGCGGCTCGATAATGATGATGCACGGCCGTTTGAAAGAAAAAAACGGCGC
66Neisseria gonorrhoeae FA 1090
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,123,200
1
CTGCAAGGAGACGGAGGCGCAGGGAGGGGGCGGCAGCCGTCCTCCCAAGACATGAGGACTTCTAGTTCAGTCTGAGACCTTGGTGCAGGGCTGGGCGAGTAAACAAATGCAAAAGAATAAGGACCTCGAGGTCGGGCGCGGTGGCTCAAG
120homo sapiens
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
153,010
0
GGCCGCAGGCGCCATGGTCGCCTATTCCATGGGCATTACCGAGCTCGATCCGCTCAAGCATGGCCTGATTTTCGAGAGGTTCCTGAACCCTGAGCGAGTGAGCCTTCCTGATATCGATGTCGACTTCGACCCTGAAGGTCGTGCGCGAGT
13Bifidobacterium longum NCC2705
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
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6,396,150
1
ATTTCTTTACAGTTCTTCCATGTATTTTGTTTTGAAAGTAATATGCCTGAGGTGAAAATGGCGGCATTTCTGTCATGATTTAACCTTACTAGAAATGACATTCTTTGTTCTTTGTCTGTTTAGTTGAGAAGTGAACCAATTCCCTGTGCT
120homo sapiens