#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
1,064,700
0
TTCGCCCCAACCATCAGGATACCTTTTTACATTTCCTCTTATCCTTTGCACATTATCAAAGGTTTCTTGGTCTATGATTGCTTCGTGAGTATTTTCAAAGATGAGCCATTTATCTTCGGATACATATTTACTTTTCTTATCCTTGAAATG
39Finegoldia magna ATCC 29328
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
2,264,210
0
GCCTTAACAGCATATGGATGTCGAACTTGGCGTTGTGGAGGACTTTTCCCACGGTTGGGTCAGTCAGATACCGCTTCAAACCGTTTAATACGTAGCTCCTGCGAAGCTGGGGGCCGGCGTTGTTATGGGCCACGGGAATATAGACGTGGT
73Pelotomaculum thermopropionicum SI
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
3,841,760
0
TGGTACGTGGAGATCACCGGCTCGCCCGGCGGGTTGTCCGGGTCGATCACGTCCGGGTCTGTGATGCCCGCCTTGACGAGTGCCTTGCGGACGCGCTCGGCGAGTTCACCGGCGGCCTTGTTGGTGAACGTCAGGCCCAGCACCTGCTCG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,260,850
1
TCTTAACACTTTCACACGCTCCATCGCAACAGCCTGCAGTCATGGGCTTTATTGTCCTGTTTGCTGGACATGATACCTGAGTCCTCAGAGGTTGGCCCTCCTGCCTGGAGTGTGTTTCACTGGGGAAATCGTATAAGCAGGGCAGGTCTG
120homo sapiens
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
1,944,540
0
CTGCGCCGGCCTGAAGGCGGTGGGGCTGCCCGAGAGCGTGCCGCTCGTCCTTCTCGTCGGCCTTGCCGTCTGCGCCCTGCTGGTACGGCCGCGCCTGTGGGCGGCGCTGGGCCTCGTCTGTGCCGCCGCCTGCGCCTTCCCCGTGGTGGT
4Azorhizobium caulinodans ORS 571
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,657,800
1
AGCCACCGCGCCCGGCCTGGGTCAGCCATCTCTTTAAAGAACTCCAGTTCCTGGTCGGGCGCAGTGGCTCCCGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,161,450
1
GGGCTAAAGGAGGCAGGGCAAGCCAGCCCCTGAGCCGGCATGGTTCCCGGAACCCCGCACCAGGTGGAAATTGTTTAACTATATTCCCATGACTGGAAAATTCTGGTAATTGTGTAACAGCAGCAGCACTCAGCAATTACCCAGGGTTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,284,050
1
ATCACAAGGAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCAAGGATGGCAAGAAAAGCTGGCAACTTCTGTGTACCTGCAGAACCCAAATTGGCCTTTGTCATCAGGACCAGAGGTATCAATGGTGTGAGCCCAGAGGTCTGAA
120homo sapiens
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
2,705,170
0
CAAGATTAGCTGAGACACTTCAAGAAGTGTATTTACAAATGATTATTGGAGATGGAGTATTCCATGCAGACCCACATCCGGGGAATTTAGCAGTGACTGAAACAGGTACGGTCATCTTTTATGACTTCGGGATGTCTGGGACTGTCGGTC
45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,134,650
1
CCCTGGAAGAACTTGCAGGCCAAGTGAAAATGTGACTGAAAACCACCTGAGAACACAGCAAGGTGACTCATGGAGACTCAAGAATCAAACTCTTGGTGACCCATGGAGACTCAAGAACCAAACTCCTGGTTGCTATAGAAGTTCAGGGAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,580,750
1
ATAAATTACCCAGTCTTGGGGAGTATTCTTTACAGCAGTGTGAAAACAGACTAATACACAGGGTTTCACTGTGTTGCCCAGGCTGGTTTCAAGTGATCCTCCCGCCTCGGCTTCCAGAGTAGCTGGATTGCAGGTGTGAGCCACTGCACT
120homo sapiens
G000009305
ASM930v1
GCF_000009305.1
PRJNA224116
SAMEA3138199
null
2006/06/28
Penn State Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
637,000,130
RS_GCF_000009305.1
Monoisolate
Complete Genome
Full
representative genome
Major
382,638
212
Helicobacter acinonychis str. Sheeba
strain=Sheeba
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter acinonychis
true
Eubacteria
Proteobacteria
1
0.994
0.9
1
1,557,588
2
38.17
1,553,927
1
1,547
470,618
89.011857
99.12
0.7
100
271
yes
yes
yes
20
high
453,830
0
AAAAAACCTAATGCCAAAATTGGGGTTTGTGGGTGCACCGCAAGCCACATGGGAGCGGATATTTTGAAAAAATCCCCAAGCGTGAGCTTTGTGTTAGGGGCTAGGAATGTGTCTAAAATCTCTCAAGTTATCCATAAAGAAAAAGCCGTT
46Helicobacter acinonychis str. Sheeba
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
3,675,100
0
TCGCCATTGCCATAACCGGCGCTGTAGAATGAAGCGCTGGTTGGGAAACTGAACGTGAAGTCCTTGATCCCCCATTTCCAGTCGCCAAGGAGACCGTCGATATAGGCGTTACCAGTCGTCGCATAAGTGGTTGCTGCAGGCATCTTTTTC
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,708,450
1
AAAGGACAAATGATGATATGGGTTCTGCCTTGCCCACAGCAGGTGCTCAATGACTACACTCAGAAAAATGGCTGCTAATAACAATTCAAAAGAGTTATATATCAGTCACGAATATCTATGCATGAAATAACACAGGAACCACCTTTATAA
120homo sapiens
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
302,770
0
GGGAGTGACTATTTACGAAATCGCTTATTTTACTCAAAATGCATGGATCTATTTTTATAAAGGACTTATCATTTATATGATATATTGATATTTTTCCAGAGTTTTTAAGTGAGTTATCTGGAATGGTTTGCGATTCAGTATCTTTATCGC
29Clostridium acetobutylicum ATCC 824
G000008665
ASM866v1
GCF_000008665.1
PRJNA224116
SAMN02603985
null
1999/12/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/665/GCF_000008665.1_ASM866v1
638,154,502
RS_GCF_000008665.1
Monoisolate
Complete Genome
Full
representative genome
Major
224,325
2,234
Archaeoglobus fulgidus DSM 4304
strain=DSM 4304
null
Archaea
Euryarchaeota
Archaeoglobi
Archaeoglobales
Archaeoglobaceae
Archaeoglobus
Archaeoglobus fulgidus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,178,400
1
48.58
2,178,400
1
2,518
688,447
93.086761
100
0
0
186
no
yes
yes
17
medium
1,261,780
0
AACTCATCCAAAGAATCAAACAGATGGATCTTCTGCTCCATCAAACCAAAGAACCTCTCTATCTTTCCATTCGTTTGTGGATGGTTTATTCTGGCAAGAACATGCCTTACTCCATTCTCGGCCAAAAACTCCCTGAATCTATGCTTGGCC
3Archaeoglobus fulgidus DSM 4304
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
625,650
1
CCACAGATGGGGCTCTTCCACCTCCCGAGGGCCTGTGTGGCAGCGCCGCCCCCTGCCCCAACCTTCCCCACACCTCAGCTCACCTGGGTCCCACCCCTCACACCCTCCCCACCCCCTCCAGCCCCAGCCTCTGCCCCCCACTCACCCTCT
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
2,032,420
0
GAATTGATTGTCATCCATCATATTCCATCGCTCGGCCTCTGCGATGTTTTCTATCTGGATAATACGTCTTTCCAGTTTTTCGATTTCTTCGATAAGTCCGGTTTCCCGACGTGCAAGTAACCCGGTGAGTAAATCATTCATATTTCACCT
87Sodalis glossinidius str. 'morsitans' morsitans
G000008765
ASM876v1
GCF_000008765.1
PRJNA57677
SAMN02603243
null
2002/11/22
Genome Therapeutics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/765/GCF_000008765.1_ASM876v1
637,000,076
RS_GCF_000008765.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,562
1,488
Clostridium acetobutylicum ATCC 824
strain=ATCC 824
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium acetobutylicum
true
Eubacteria
Firmicutes
1
0.998
0.1
0.9
4,132,880
2
30.93
3,940,880
1
3,896
1,211,240
86.343567
100
0
0
345
yes
yes
yes
19
high
2,812,030
0
AATATCTAAACTAAATAATTTTTTCATATAATTACCTCCTGCTAACTTTTAGTCTTTATTGATTAATTTCCCTTACATGTTTATAATATACGATTTTAGTTTATAAATCAAAATGGAAATCGTTTTAACTTATGAATAAGCAGTTAACAT
29Clostridium acetobutylicum ATCC 824
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
870,480
0
CACCGCCATGGACTTTATTTTGGCTGGCGGACATGGCGATATTTCGGTGACCGCTAACGTGGCCCCGGCGAAGATGGCCGCCATGTGTGAGGCGGCTCTGGCTGGTGATGCGGATACCGCTCGGGCACTGAATGCGGAACTCGAACCCCT
1Alcanivorax borkumensis SK2
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
6,622,070
0
GCGCCGAGGATCGAGTTCCTCCCGGGCACCCATCCGGCCGTCGTCCAGGAAGCCGTGTCGATGCTCGCCAACTGGCATGCAGCCTTCGTGGAGAATCAGAAGCCTTAGAGCGACACAGCTCGGCCGCAACGATGCCCATGTGGGCATCGC
86Sinorhizobium meliloti 1021
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
1,760,200
0
CGCCGAAGGTGAAGCGACACCAGAGCCGCAGCCGTCTAGTAACGCCAATCTTGCTGATCTGACTGTGGATGGCAAGACGGTTGACGGATTCTCCGCGGATACCACTAAATATGCCGGTGCGCTGGCTGGAGATGCTGCTTCCTACCCGAC
13Bifidobacterium longum NCC2705
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,820,400
1
TGGTAATGTCTTCTTGCACAAACAGCCATGTGAAAACCTCCTGCCTCTGAAGCGTGGTCTGGCAGCCACGGCTGTGCTGCGTGGGAGGCGGCCCCGGCCCAGTCCTGACCTGAGGGGATGGGAGCCCAGCCTGTCCTTTTGGCCTCGGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,279,100
1
GCAGCACCTGAATTTGAGAAGGGACACATTCAAACCACAGCACATGTAACCTGACACAGTCACAGGTCCTGGGGGTTAAGACATGGGTATCTTTGGAGACCGTCATCTTGCCTGCCGACATGCCTGTGGCACAGATCATGACAACAGTAA
120homo sapiens
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
440,700
0
TCGGCCGATGCCGCCAAGACCAGCCTGTTGGCTACGCTGTCTCATGAACTGCGCACACCGCTGACCGCGCTCGAAGGCTATGGCGAGCTGCTCGAGGACGAAATCCTGGGGCCACTTTCCCATGAACAACGGGATGTCATCACCAGGCTG
42Gemmatimonas aurantiaca T-27
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
3,953,040
0
AAAACGAACGGAATCTAAAAAACGAACGGGGTCTAAAAATGCATTTCAGAAAACAGATTCTATAAAAACAGATTCCAAAAAACAGATTCTATAAAAACAGATTCCAAAAAACAGATTCTAAAAACGGTTATAAAGGACGAGAATGCCAGA
61Methanosarcina acetivorans C2A
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,899,700
1
CAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAGATGGTGAAACCCCATCTTTACTAAAAATACAAAAATTAGCCTGGCATGATGGTGGGCGCCTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,157,250
1
AGCATAAAAATCCTGTAGATGCTTGATGGACCGGGCACAATTCATCCTCTGCTGCCTCCACGGCCAGCCCATTTGTCAGTCAAGGGAGAGCTTTGGGGTTTAGGTCTTTAACAGGATTGAGTGCAGGGGCTCCCCAGGTGCTCCTCCAGA
120homo sapiens
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
110,370
0
TCAGGTATCTTTGGATTTAGTTTAGCTATTGGCCTAGGAATAGTTATCAAAGATTATTGCCAAGACAGGCAGCGTCGACAAATGACAAGGGATTTACGCACCTTTTTTTCACCTTTAGGACAAATCGAAGTTTTATATATCAATCCTTGT
93Streptococcus pyogenes M1 GAS SF370
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,937,700
1
GAGGACCCAGAGCACAGTCCTGAAAGCTTGGCTCCTCACCCCACCCTCCTTGAGAATGACAATTAGCCCTAGACAGTCACCAAAATATTGCCAAAGCTGGAGAGATGAAGCCCCTGGTCCCTGTGCCACTTCTCTGACTCTGGATAAACC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,429,400
1
AGTAAAGAGGCTGCCGCGGTCACCAATGCAACCGCTTTGCTGTGCTCTCAGCAAGCCGGCCAGACAGCAGCATTCTCGAGTGTAAGGACACTCCCGGCTAGAGAAGCTGCCTTTGGAGCTACACTAAGATCTAAGACCTGGACAACCCAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,233,400
1
CCGGAGCATCTTTGCAGGGATAGAGGCCGCAGGGAGGACTCCAGCTTGGTCCTTGGGAGATGTGTTCCTGCAACCCATGCCTTTTCCAGCGGGTTCCTAGGGCTCTGCTGTTTGACTCATGGAGAAGCCGGTGGTTTTGGTGTTGTGCTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,143,950
1
GCCTGTAATCCCAGCACTTTGGGCGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCTCGTCTCTACTAAAAATACAAAAATTAACCGGGCATGGTGGCACCCACCTGTAATCCCAGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,893,550
1
TTTAGCAGTTATTCTAATTACCATAATTTCCAAGTAGTGATCAATGAAAAAGATATCTTGTGTCCAGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTAGGAGGCTGAGATGGGCGGATCACAAGGTCAAGAGATTGAGACCATCCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,181,700
1
CACACGGAGTTCATAAATTTGAGAGCAGTTTACAAAGTAGATTCTCCTACTTTCCAGGAAACCCAGAAATGTCTGGTGATTTGCCCAACAGTCTCAGCTGTTGTGGTCAGCAGGGCCGCTGTGGTATCCAAATGATTTCTAAAGCAGATT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,012,550
1
GGCGAAGAGTGGGCTCTGCCAGGAGGAGCCGGAGAGGTACCCCACTGACAACTTGATGTCAGATTTCTGGCTTCCAGAACTGTGAGAGAACACCTCTCTGTCGTTTAAGCCACCAAGTTTGGGTAATTTGTTACAGTAGCCACAGGAAAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,164,900
1
AGGAGGATGAGTTGAGCTGGCTGGTGGCCCCAGTGTGCCGTACTACTGTCCCTTGGGGAGAGTGGGACAGGGTGGGCGCCTGACACACACCACGCGCCCCAGAAACATTCAGTGTGGACGTTTCCTTTTTCAGCAAGGACGGCGCCCAGG
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
2,294,370
0
GTGCGAATGGCTGTGATACCGTCCATTTCTGGCATCATCATATCCATGAGAACAGCACTAATACGATGTTTGTGTTGGGCATAAAGTGCGATCGCCTCAATACCATTACAGGCAGTCAGAATTTTATAGTTAAACTTTTCGAGAATCACC
70Nostoc sp. PCC 7120 ASM970v1
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
278,850
0
TGAATCTTAGGTTCTATATATTTGAGAAGTGTTTCTCCTTGAGATGAAATACCACCACCAATAAGAATCAAGCCTGGATCATAAATAATTTGAATTTGAGCAATTCCTTCAGCAACATAATTACTCCATTCATTGAGAATATTAAGTGCT
89Staphylococcus haemolyticus JCSC1435
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
2,052,440
0
AAACCTTTTAGATATTCTTTAGATTTCTGGCCATTTCCGTTACATTTGTTTACATAAACTCAGAATAAAACATAAAAATTAGTTATTTTAAATACTTTCCCCGAAAACGATCCCAAAGAAAAGATAAAATTCTCAGAAGATGCTGGTTAA
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,372,300
1
TGTGGTGAGCTGAGATTGTGCCACTACACTCCAGCTTGGGTGACAGAGTGAGAGAGACCCTGTGTCCAAAAAAAAAAAAAAAAAAAAAAAGTTTACTGAAATGGTATATGGTGTAGAGTAGATTATTGAACAGCAGTGAGAAATGAGCAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,357,050
1
CTGGCCGCGCTCCACGGAGCCCCTGGAGGGCTCAATGGAGAAACCCTTGTGCTGCAGGGATGCGACGCTGTCTATGCTGAACTCAACGGTCTGTGGGGTATGGGGCTCCTGTAGGCTGGCGACCAGGCACCGCTCCCAGAAGCAGTGGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,911,350
1
AGGCACCCCTTGGAGCAGATCCTCCATAGCAGGACCGTCCCCAACCCCTTGAGCGTGGCCTGGGAGGTGTGGCACAGACTGGCAGGTTCTTCCATCCCGGTCCCTCCCACTCATTTCACTTTGGCTGATGCCAGCCTCTTTAATTGGACC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,708,450
1
GGGGTCCTATCTTTAGCCTCCTTAAACAAAACAACTATCAGCCAGGAATTTTGTATCTAGAGAAACTAAGCTTCATAAACGAAGGAAAGATAAAGCCTTTATCAGACAAACAAATGCTTAGAGAATTTACCACTACCAAGCCAGCACTAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,558,800
1
CTCTAGCCTCCTGGAGCCCCTGCTTGCACTTCAGCAATAATGCCTGATAGTTAGACACTGATCACTAGCTAATTGGGGTAGTTTAACATATGGAATGAGATTCTGGCCTTATTATCAGGTTAACTATTAACTCTACACCCCATGAAATGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,698,500
1
ATGAGAGGCAGCTTACAATGGTGAAGCAGTGGTCACAGAAAATCCATTTCCAAAGCCTCTAATCCAGCAGTTTGGGGGATGATTTTGTCACCCAGGGGACATTTGGCAATATCTAAAGACATTTTTGGGGCCGGGTGTGGTGGCTCATGC
120homo sapiens
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
1,822,600
0
ATGGCACGGGCGAAAGTCTTTCCCCGAAGAAAAGAAGCATCAGAGCCGTGACGAACAGCGGATAGAGGAAGTGGATGGTGGTGGCTACACCGCTGGCCATATAGCCATAGCCGTGAAAGAGGAAAAGTGCCGTGCCGGCATACAAGAAGC
75Porphyromonas gingivalis ATCC 33277
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,566,800
1
AGCTCAGTCCTCTCTGCTGGCTTTCCTGTGCCCCTTGTTGGATGGTGCTCCATCTCCCACCTTAAAAAAAAAGTTATTTATTTATTTATTTATTAGAGACAAGGTCTTGCTCTGTTGCCCAGGCTGAAGTGCACTGGTGTGATCATGACT
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
1,728,480
0
TGGCGTTGACGATGACGGCGACGAAGAGCAGCAGCAGCCCGCCGATGACGGCCAGGCCGCCGGGGAGGTCGAAAAGCAGCAGCAATCCGCCGACGATCTCCAGCACCGGCATGGCGGCGGCCACGGGTTTGACGAGGTCGGTGGGCAGCA
36Desulfovibrio magneticus RS-1
G000009365
ASM936v1
GCF_000009365.1
PRJNA224116
SAMEA3138202
null
2006/07/24
German Research Centre for Biotechnology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/365/GCF_000009365.1_ASM936v1
637,000,004
RS_GCF_000009365.1
Monoisolate
Complete Genome
Full
representative genome
Major
393,595
59,754
Alcanivorax borkumensis SK2
strain=SK2
null
Bacteria
Proteobacteria
Gammaproteobacteria
Oceanospirillales
Alcanivoracaceae
Alcanivorax
Alcanivorax borkumensis
true
Eubacteria
Proteobacteria
1
1
1
1
3,120,143
1
54.73
3,120,143
1
2,820
929,045
87.73194
100
0
0
352
yes
yes
yes
20
high
603,850
0
GCCGCTTGTGCCTCCCGGGCAATCTGTAACGGGTTGCGCCCGAGTTGGGGGGCTGAAGGCAGCCAACCCATGCGTTCGGCGCGTACATTGAAATCCACCAGGCTGCCCTGGTAATCCTCTGGTTTGGCCAGCGGCGATAGCAGCTCGCTG
1Alcanivorax borkumensis SK2
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
199,290
0
GAGATTCAGCGTAGTGAGCTTGCCGACCATTTTCAATGTGTGCCGTCTCAGATCAATTACGTCATCAATACGCGCTTTACCGTTCAAAAAGGATACCTCGTAGAGAGTAAGCGCGGGGGCGGCGGGTATATTCGCATACGCAAGGTGCAG
15Brevibacillus brevis NBRC 100599
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
993,750
1
GCAGCTAAACTGGACGGTGTGGAACGGGCGGACCTGTAGCACGGGAAGCTGCTACAGGCACTGGGAGGAGAATGGGCAGCAGCAAACGGCCTTGGGAGACGAAAAGCGTCTCAAAACCAATTGTGGTGACGGCTGCAACTCCATGAATGT
120homo sapiens
G000009245
ASM924v1
GCF_000009245.1
PRJNA224116
SAMEA3138197
null
2006/03/02
LLNL
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
637,000,111
RS_GCF_000009245.1
Monoisolate
Complete Genome
Full
na
Major
376,619
263
Francisella tularensis subsp. holarctica LVS
strain=LVS
null
Bacteria
Proteobacteria
Gammaproteobacteria
Thiotrichales
Francisellaceae
Francisella
Francisella tularensis
true
Eubacteria
Proteobacteria
1
1
0.9
1
1,895,994
1
32.15
1,895,994
1
2,100
571,581
88.799806
99.82
0.41
100
311
yes
yes
yes
20
high
1,001,390
0
AAAAACTGATTCTGTGGTTTTTAGCTGTTAATAAATAGCCTGATAACGTTGATACTCCGGATAGAGTACCAGTTTTAGCATGTACTCGTCCAAGTAGTTTACCACCCATTCTATATGAAATTGTACCGCTTATACCAGATGCTGATAAGT
40Francisella tularensis subsp. holarctica LVS ASM924v1
G000011005
ASM1100v1
GCA_000011005.1
PRJDA20361
SAMD00060931
null
2009/12/25
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1
2,505,679,075
GB_GCA_000011005.1
Monoisolate
Complete Genome
Full
na
Major
304,371
570,267
Methanocella paludicola SANAE
strain=SANAE
null
Archaea
Euryarchaeota
Methanomicrobia
Methanocellales
Methanocellaceae
Methanocella
Methanocella paludicola
true
Archaea
Euryarchaeota
1
1
0.8
0.9
2,957,635
1
54.92
2,957,635
1
3,055
877,570
87.405714
100
0.65
0
198
no
yes
yes
17
medium
1,480,830
0
CGGCATCATTCTGCTGGCCCTTTCCCTGAAATACCTCAATGTCAACGAGCTCAAGTCGGATAAGCTGGATATTGACTGGCCGGGCTCCGCAATTCTCATTGTATCCATGGTATCGCTAATGCTGTTCCTTGGAGACCTGGGGAAAAATGT
58Methanocella paludicola SANAE
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,760,300
1
GGGGTGCCAGGGAGATCTGTTTCTGCCTGATTCACAATCAACCCACAGGCACGAAATCACAAGGGCTGAAATGTGAGCAACTAGGGGGAAGCCAGGAGACTTCGTTTCCAGAGAACCCTGAACAGCCTTCTGCCGGTCACAGATGAGACA
120homo sapiens
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
1,492,790
0
TTTCGGCCACACATATTCCACCTCGTCAAACAGCATCACGAGCAAATCGTCGATACTCAGTTCCGGTTCGTTCTTACCTCTCAATATCAGATTGATGCCGGAATGTACTCCTTTCAGATCGGCCATCATAGAACCCATCATACCTCCGGG
11Bacteroides thetaiotaomicron VPI-5482
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
3,434,860
0
TATTGAATAGAATAGGGCAAAACTTGTTCGCATTTTTAGAAAAGGGATAGGGATATAATTCAAGTAGTACTTCGAATACTCGAACTTTACACTCATTATATTAAAACAAATCCTTTTATATGGGAAATATGAATTACTTACATAATTCAT
6Bacillus anthracis str. Sterne ASM816v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,935,050
1
AGTGGAAACCTCGGCTTGGGCTTAGCCAGAGCTGGCTTACGAGCTGGAATCAGCCCAGTCCACCTGGCTGGAGTCTTTGATGGCCCAGGCCACGCCAGCTTCATGGGGTCTGCAGGGAAAAGAAGTTCAGCTCAGAAATCTCTGGCTCCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
108,150
1
AAAATGCCCATTCAATGATAGACTGCATAAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAGAAGGATGAGTTCATATCCTTTTCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAATCCAAG
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,163,370
0
GTCGTGAAAGGATTGGCTACATTTAGTGGCCTGTTTGGAAATTTCCTCGGATTTGCGATTCCGTTGATTATCATTGGATTTATCGCGCCAGGCATCGGTGAGCTGGGCAAAGGGGCAGGGCGGTTGCTTGGGGTAACCACAGGGGTTGCT
15Brevibacillus brevis NBRC 100599
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
1,094,730
0
GATGCCAAGGGTGAATTGGGTAAATGGCTATGGGCGCGGGCCGAAGCGGGTGAGTTAAATTTAGATGAAATTGCCCAAGAATTGACTGCGCAATTTAACAAATTCGTCGCTGTGTTTGGCCGCCCACCAACTCATGTTGATAGCCATCAT
115Yersinia enterocolitica subsp. enterocolitica 8081
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
6,007,170
0
TTCATTAACCGTCCGATGCTGGAAAAGCAGAAGTCAGAAGGAACTACCCGCAAACTAGTTGGGTTTGAAATGATTGACCGAGGCATTCCTCGTCATGGCTATGAACTCGTGAATGAGGAAGGGGAAGGTATAGGCGTGGTGACTTCCGGA
11Bacteroides thetaiotaomicron VPI-5482
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
260,910
0
ACGATTACCCTGCGCGCAAATGCCTCGAAGAAACAATCAGGAGGAACGTACCCACTAGATAAGACAATTCGCACTACTATTGGTATCAATAGGACATGGAGTGGCGCGTTTGATTTCTCAACATTTGACATTGGACAGTCATTTGTGATT
45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
3,202,940
0
AGAAGAGCCGGATTTACTGCTGCTTGACCTCAAAATGCCTGGAGCCAATGGCATGTCAGGTTTGATCCATCTCCGTGCAGAGTATCCCGACCTGCCCATCGTTGTGGTCTCCGCCAGTGAAGAACCCGCGGTGGTCACACAAGTAAAAAG
108Vibrio vulnificus YJ016
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
2,942,810
0
GCTGCTCAGCTACCTGTTTACCGTGGTGGAAGGATTCATCGCACCGGATGCGTTCAACCTGCTGGAGCACCTTGCCGTTGCCGTGGCCGGGGTAGTTTTCGCCTACGGGTGCCTGCACATATCCAGAAAACAGAGCTCCGAAGGGAATGG
43Geobacter sulfurreducens PCA
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,051,300
1
GAAGACTAGAACAAATTCTAGCTCATGCAGCTTTAAAAGAGAAACTTAAGACTACTATATGACATTCACGAATTACACAAAAAACACTGTTGTTAATAAGGGCACCATTCATGGCCATGAAACTCCATCATGTCTCTTGTGGTCAGGCTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,235,950
1
TCCACAAGCCTCTACCCTGTACCCAGGCCCCCTTCGACATCCCCATCCCACCATCCTCTAAGAGCAGCCCCTTATGTCAGCAGAACCAGGGCCCGGGAGGGCTCCCTGAAACCCATGTCCCACCCTCACCTGCCTCGGCCTGCCAGGAAG
120homo sapiens
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
896,350
0
CTGCGCGCGCTGGGCGGCGTCTACGATCAGCTGTGAGCCTGGCGGGCGTCAGGCCTTCAGGTTGCGCTGCGCGAATTCCCAGTCGATCAGCTTGTCCAGCACCGCGTTGACATAGTCGGCGCGGCGGTTCTGGTAGTCCAGGTAGTAGGC
27Chromobacterium violaceum ATCC 12472
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,833,750
1
TAATTTTATATGAAAGAGACAACTGCTGCTGACCAGGTGGCTGCTGAATAGATGTGTCTGATCCATGCAGCTTAGTTGAAAAACAAGTTAAATGAAGTAAAAAAAAATCTCTTTGGGAGAGAGAACAACGTAGGCTGTGTTGGGGTCCTA
120homo sapiens
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
1,119,430
0
AATACCGTCATTTGAAACTATTTTACAATTTGGAACTATAAAGTTGTGCTCTATTTTTAAGGAGCATTGATCGAGAACCATGCCTGCATTTAAATTACCTACATTTGCAGGCATATCCGGTAAGAACACTATATCGTTCTCGGTTAAGTT
104Treponema denticola ATCC 35405
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
373,500
1
GCTCCCCAGGGGCCAGCCCCGCCTCTGCGTCTGGGTCTCCATCTGCGGGGAGAGATGGAGGCTACATAAATTTTGCTTTATCAGGAAGAAGCCAGCCTTGGAGGTTACTCATCACTAATTAATCACGGCACTAATTAATTTATCCCTGTT
120homo sapiens
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
1,152,450
0
AAAATATCTTCTTTGTCGGATGCACAGAAGAAAGAGGCAGAAGAAATGAGTTTGTATATTGATTTTGCAGAAAAAGGAATCGATAAAGACGAATTCGTTAAGGGTATGTTTAATTATGAAGCTTTGTGGCATACAGAAAATGCTAATCCG
10Bacteroides fragilis YCH46
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,654,000
1
CATGCCACTGCACTCCAGCCTGGGTGATAGAGTGAAACCCTGTCCCTCTCTTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTTTCTCTGTCTCTGACACACACACACACACACACACACACACACACACACACACACACACACAGTCTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,647,450
1
CATGCTGAGGATACAGCCCTATGTGCGGGCAGCCACCTAAGATCACGCCCACGGGTCCCCATGCATTCTCCTCCCACCTGCTTCCTACTTGATAAGGGTTGTTTAGGGTAAATATGTGCGATAAATGTATTGAAAAACAGGCAACTTCAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,538,750
1
AGCAAGAACCCTGCTGAGACTGTTTACAAGAACCCCCACCCTTGACACCAGATCAATTTCTTGCAGAAGCTGTCCCCTGCCTGCCGGCTGCCCGCAGGGTCTGGAGGCCTCGCTGTGTTCTGAGCAGTGCTCAGCTCTGCGCAGCACCTC
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
4,004,520
0
ATGACGTAATCATGTAAATATAAATAATAATCATAGACAAATTTTTACGGCGCGTTCAGGCTTGCTTAACGAAATTTTTTATTAACTATTAAGCCTATGAAAAACTTAACTTCGCTAAGTTAAATTTTTTATCATCCAAAAAAACACGTT
87Sodalis glossinidius str. 'morsitans' morsitans
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,092,950
1
ACCACCCCTCTCCAACCTTCAGGTGATTATCTGACAACCTAGAACAGCACCCTCCACCCTCAGATGAGCATCTGACAGCCGGAAAAACACCCTCCACCACCAGGTGATCATCGGACAGCCTGGAACGGTACCACCAATTAGGTGAGCCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,968,050
1
TCTCATGGTTCTGGGGGGCAGAAATCCAGGCTGAAGGTGTCAGCAGGTTTGGTTTCTCCCTTAGCCTCTCTTCTTGACTTGCAGATAACCACTTTCTCTCTGTGTCCTCACATACATGATCTTCTCTCTGTGTGCCTGCACACGCTTGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,044,200
1
TTTTTTTTCTTGAGACAAAATCTCACTGTGTAGCCCAGACTGCAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTTTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTTCACATGCCTGCCACCAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,548,500
1
TTGCATGTGTGTGCCACATTTTGCTTATCTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCGCTGTCACCCAGGCTGGAGGGCAGTGGCGCGATCTTGGCTCACTGCAACCCCTGCCTCCTGGGTTCAAGTGATTCTCATGCCTCAG
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
1,284,660
0
GCGGTTTATTTAACTGAACCTTTATCGAGTAATTTAATTCCAGTCGTTGTTTATCCGCCTTTTAATCCCCCTTCTCCCCAAAAAAAGCGGCTTTCCTTACAACCGGGGCAACCGGCGGCAGACTTGTTAACTGCGGTTAAGTTAGAAGAT
64Microcystis aeruginosa NIES-843
G000007025
ASM702v1
GCF_000007025.1
PRJNA224116
SAMN02603141
null
2002/11/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1
637,000,243
RS_GCF_000007025.1
Monoisolate
Complete Genome
Full
representative genome
Major
272,944
781
Rickettsia conorii str. Malish 7
strain=Malish 7
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Rickettsia
Rickettsia conorii
true
Eubacteria
Proteobacteria
1
1
0.9
1
1,268,755
1
32.44
1,268,755
1
1,435
347,621
80.686027
99.46
0.33
0
218
yes
yes
yes
20
high
381,030
0
CTGATTTTGTGGGTGAAAATCAAACATAAGCTCAAAATTAGTAAGCGGAAATGTACACTTGGTATTTTGAATAAACATTTTAATCCTTAGAAGAAACTGTTAAAACCTCTAGTCCCTGGATTCTTTTAAAGTCTTTTACATTTAGAGTTA
82Rickettsia conorii str. Malish 7
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
2,658,240
0
TCCACCGGCCGGTCTGCTGGTCTTTGAAATACGAGCTGTCGCCCACCTGAATGAATTCAACGGGCGTGTTCATTAAAAGGCCTTTCATGCGCACCCTGTCCGGGGCCACCCGCTCGCCCTCCACCTGGCTGAAAAAATCTACGCTGGACT
73Pelotomaculum thermopropionicum SI
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
679,640
0
CCCGGTCATATTTCGCCCCGAGCTTCTACGAGGTTCTGCCCTTCCGCGTTACCTCTGAGATACTTAAAGGCAGTTATTTTCTCTGAACGTATGATGAGCGAGGAATTGTGTCTGAGTCGACCAATAACACCGCGCATCCCAAGCCGAAGA
84Rothia mucilaginosa DY-18
G000006745
ASM674v1
GCF_000006745.1
PRJNA57623
SAMN02603969
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1
637,000,333
RS_GCF_000006745.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,277
666
Vibrio cholerae O1 biovar El Tor str. N16961
strain=N16961
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio cholerae
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,033,464
2
47.49
2,961,149
1
3,594
1,184,587
86.533164
99.86
0.03
0
360
yes
yes
yes
20
high
2,010,710
0
AAATCACTTCCGCACTCTCTTTTTTCATAGTTTCTATCGTGCCGGAAATTTCGCTCACCGCATTCACCGTTCTGACGGCTAAACTACGCACCTCATCGGCGACAACCGCAAATCCGCGTCCTTGCTCACCCGCACGAGCAGCTTCAATCG
107Vibrio cholerae O1 biovar El Tor str. N16961
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
2,162,940
0
AATTTCCAGTGCTTCCAGCAGCGCTTTGTATTGTCGTTTGCGCTTTTCCAGAGTTCCGGGATCTTCTGCATCGGTAACCAGGCTATTAAGGTTAAAGCAACTGTATAAATCCCTGACTTTCGCGGCAATCTGCCCACCTTCTACCGGAAA
50Idiomarina loihiensis L2TR
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
212,250
1
TAAAGTATAATAAAAAAAAATCATACCTAGATATATCACAATAAAACTTGACCTCAGAGTTTCTAGCTCTCAAGACCAATTCCTCCCATCCTGCCACTAACAGATTTCTCCAAACATCTCTGCACCTCAGAGTGCAAATACAATCAAACA
120homo sapiens
G000007905
ASM790v1
GCF_000007905.1
PRJNA224116
SAMN02604097
null
2003/06/26
Univ. Wuerzburg
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/905/GCF_000007905.1_ASM790v1
637,000,131
RS_GCF_000007905.1
Monoisolate
Complete Genome
Full
representative genome
Major
235,279
32,025
Helicobacter hepaticus ATCC 51449
strain=ATCC 51449
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter hepaticus
true
Eubacteria
Proteobacteria
1
1
0.9
1
1,799,146
1
35.93
1,799,146
1
1,802
571,920
93.657102
99.94
0.35
0
303
yes
yes
yes
20
high
253,240
0
CTATGATTTGTTGTTTTGTGTTGTTTTGAGAATTTTTAGATTCTTTAGCCTGTTGTGCTTGTCTTTCTCTATCCTTGGATTCTATGGTAGAATCCAATCCATTAGCTAACTCGATCTCTAGTCTTTGTGCTTTGTAAGGTGTGTGTAGTG
47Helicobacter hepaticus ATCC 51449
G000007745
ASM774v1
GCF_000007745.1
PRJNA224116
SAMN02603473
null
2004/09/17
Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/745/GCF_000007745.1_ASM774v1
637,000,156
RS_GCF_000007745.1
Monoisolate
Complete Genome
Full
representative genome
Major
221,988
157,673
Mannheimia succiniciproducens MBEL55E
strain=MBEL55E
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Basfia
[Mannheimia] succiniciproducens
true
Eubacteria
Proteobacteria
1
1
1
1
2,314,078
1
42.54
2,314,078
1
2,120
690,147
87.871627
100
0
0
329
yes
yes
yes
20
high
2,005,640
0
AATAATAATTTACGTTCAGCATCAACACGAACAACTTCCAGTGACTGAACGGTTACACGTTCGGCACCTAAGTGTCCTGCCATTTTTTTGCCTTTAAACACGCGACCCGGAGTTTGGTTTTGACCAATAGAACCAAGTACACGATGTGAT
57Mannheimia succiniciproducens MBEL55E
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,304,050
1
GGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACACGGTGAAATCCTGTCTCTACCAAAAATACAAAAATTAGCTGGGAGTGGTGGCGTGTGCCTGAGGTCCCGGCTACTTGGGAGCCTAAGGTGGGAGAATCACCTGAGCCT
120homo sapiens
G000008545
ASM854v1
GCF_000008545.1
PRJNA57723
SAMN02603986
null
2001/01/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/545/GCF_000008545.1_ASM854v1
637,000,321
RS_GCF_000008545.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,274
2,336
Thermotoga maritima MSB8
strain=MSB8
null
Bacteria
Thermotogae
Thermotogae
Thermotogales
Thermotogaceae
Thermotoga
Thermotoga maritima
true
Eubacteria
Bacteria
1
1
0.9
1
1,860,725
1
46.25
1,860,725
1
1,866
602,696
95.430706
100
1.79
100
312
yes
yes
yes
20
high
1,383,980
0
AATAAACTACACTTCTTATAGACTGCAGGAGATCCTCGATGGAGACCTGGACGAAATCATATCGAAGCTTATAGAACACGACATAGAAAACAACCTAGAGGAAGTTTTAGGAATTGGAGCCTCAGTCGAAGAAAAGTAATAGTGGAGGTG
103Thermotoga maritima MSB8 ASM854v1
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
4,087,850
0
GCCGGGCTCAACCCCCATGCCGGCGAAGGCGGCGCCATGGGGCGCGAGGACGAGGACATGGTCGCCCCTGCCGTGGCCGATCTGCGGGCGCTGGGCATCGACGCCGTCGGCCCCCTGCCCTCGGACACCCTGTTCCATGCGCGCGCCCGC
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,975,400
1
CTGGTGCAGGATTCCTGGGCTGCTTTTCTGTAGGGTGGGACAGTGTCCCCCTGCCAGGACACCTAGAAGGCCCAGGACAGAGTGCCTAGATGTGGTGCTCCCATCCCAGCCTGGCTGGGGTGTCTTCCTCACCCAGCCACTCAGGGCAGA
120homo sapiens
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
4,654,520
0
CTGGCCGGTGAGCCAGGTCGCTTTTTCGGCGGCATACAAAATGGCGCCAGCGGCGTCCTGGCGGGTGGTGCACCCGGCATCGCAGGCGCGCGCTACCGCATACACATACGCACGGCAGGCATTGAGCCCCACGTACATGTCGGCGAGCTT
113Xanthomonas oryzae pv. oryzae KACC 10331
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
777,750
1
GGCGGAGTGGGAACTCCCCCCACAGCCCAGGCCAGGCAGAGCCTCCCCAACTCCATAGCTCCCCACAGCACCACCCAGGACACAAGGAGCTGTCACAACACCGAGGCCCATGGCAGGCGGCCCTGGGGACCAGGGCTTTGGGCCCACAGC
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
601,380
0
CCAATGCATGCAACGATAAATGAAGAAGCGATTAATATTTTAACTGGGACGGCAACAGACCTTTATACGTGTACACCGGCTTATAAACAAACGATGGTAAAAATGCGTGTATTACGTGAAAAAGGAAATCGTCCGTTACCACCTTCAAAC
6Bacillus anthracis str. Sterne ASM816v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,265,300
1
TCACCCAGGCTGGAGTGCAATGGCACGATCTCGACTCACTGCAAGCTCTGCCTCCTGGTTTCATGCCATTCTCCTGCCTCAGCCTCCCCAGCAGCTGGGACTACAGGCACACACTGCCACGCCCGGCTAATTTTTTTGTATTTTTAGTAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,555,800
1
TCCCATCAAGGAAACTTGCTCAAGCTACCAAGAAAGAGGTGACTTCCTTTGTTTTTGTTACAGTTCTGGGTTCATCAGTTGTAACTTTGATCTGAACCTAGAGCAGCCAGTGGTCATTCTACGCCACTGATATGGTTTGGCTCTCTCCCC
120homo sapiens
G000007105
ASM710v1
GCF_000007105.1
PRJNA224116
SAMN02603579
null
2010/01/12
Macrogen Inc.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1
637,000,356
RS_GCF_000007105.1
Monoisolate
Complete Genome
Full
na
Major
264,203
542
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
strain=ZM4
null
Bacteria
Proteobacteria
Alphaproteobacteria
Sphingomonadales
Sphingomonadaceae
Zymomonas
Zymomonas mobilis
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,056,363
1
46.33
2,056,363
1
1,753
604,103
86.562441
100
0
0
320
yes
yes
yes
20
high
169,520
0
CAGCGTCGTTTTACCGGCACCATTGGCACCGATCACGCCAACAATACCACCGGGGGGCAGCGTGAAACTCAGATCTTCAAACAGCTTTTTCTCACCGAAGCTTTTGGTCAGGCCGCGTGCTTCGATAACTTTGCTGCCCAAGCGTTCCGG
117Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 ZM4
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
1,634,100
0
GCTGCCGGCGCCGACTGGAGCAAGTCGTTCTACCAGATCCTGACCAACCAGCCGGGCAAGGACGCATGGCCGATCGCCGGCGCGACCTTCATCCTGGTGCACAAGACCCAGGACAAGCCGGTCCAGGGCACCGAGGTCCTGAAGTTCTTC
81Ralstonia solanacearum GMI1000