#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
1,336,790
0
AGCTATAAGGGTATTCTCTTATATCTTCAATCATATTGGCTTTAAGTGGATTCTGCTCTATGTAACACATCAGTGTATAAAAGTACGCTTCGTCTGTCACGTACCATGATTTAAAGCGTCCTTGCCAGAGATGTCCTGTGCGTTTGTTCT
98Sulfurovum sp. NBC37-1 ASM1034v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,462,550
1
ACGGCGGGTGGCACAGACCCAGGAGCATCCTTGGAGGTGGAGCCTGGTGTCCCCCAGCAGCATGACAGGTGGGGCACACAAGCGGCGGGTGGCTCCGGAACTCAGAGCTCAGGGCACGGGCTGAGGGCAAGTCCTTCCCGATGGCTCGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,698,250
1
CAGGGAGAGCTGGGGTGGGAGCAGTCTCTAAAGCTGTCTTCAAGGAACAGAAAGAGGAGTGGGGAAAGGATTTAGGATCTATGGGGTCAGCTAGGTTTCCTTTTGTGAGTTTATGTAATGGTTTTGTTATGATGGCAAAACCAGGTATCT
120homo sapiens
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
879,060
0
CATCTTCTTGATATTCATCTAATTTTTTAAGGTACTTTTTAGGTATGGAAATATTGTTCTCGTCCATTAGTAATTTATTTCCAACAAATAACGTTTTAGTTGTATCTCCATCAACTAATGTACCACTAATACCCCTACCGATAATCGTTT
59Methanococcus voltae A3
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,751,850
1
CAGCCTGCCTCTCTCTGCCTGGGCAGGACCGTGGAGCCCACGCGTGTCCTCTCTCCTGTCCCCAGATGGAAGCCGGCAGGTGGGGCCCTAGCAGGGGACATGCTCGACGTGTGGGTGGATGAGGACCCGGTGGGGTCAGGTCTGGGGCAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,292,450
1
TCTTCTCATCTGAAAGCAGGAATAATAAGAATATTTTCCCCTTAAGGCTGTTATGAGAATCAGAATTCATGGAGCATAGGATGTGTTTGAACAAGAATCAAAACCTTGCCTGAAAAGGAAGGGCCGAAAAGGGGAGGCTCTGGATCCCGT
120homo sapiens
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
241,930
0
CAGTTATATCCGCCGCAACGGATTCAAGTAATTATAAAGATTTAATTGGCGCAGTTTCATCTGCTCAACCACATCAAAGTTCGACTCAGTTAAAATCAGCTGATAAATTTTTAAAAGACGTACAGTCACATGACAAATGGACTGTGACTC
91Streptococcus agalactiae 2603V/R
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
817,050
0
CGGTGGCCAGTTGGCGCTGCAGATGGGCAATCTGCTTTTCCATCTGGCGGCGTTCTTCCAGCACAGCGGCCAGACGTTCTGGCGCATCGGCCACAGAAACCTTCATCATGGCGGCCATCTGGGTCAGGCGCTGTTCGTTAGAAACAGTCA
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
G000007605
ASM760v1
GCF_000007605.1
PRJNA224116
SAMN02603993
null
2003/04/14
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/605/GCF_000007605.1_ASM760v1
637,000,066
RS_GCF_000007605.1
Monoisolate
Complete Genome
Full
representative genome
Major
227,941
83,557
Chlamydophila caviae GPIC
null
GPIC
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia caviae
true
Eubacteria
Chlamydiae
1
0.992
1
1
1,181,356
2
39.19
1,173,390
1
1,003
363,158
90.588188
99.49
0
0
220
yes
yes
yes
20
high
836,290
0
TAGACGTTCTGCAACTGTTTACAGTATTCGAGCCAACTTCTTTGTCTAAAATCCTTTTCATTCTTAGGAGTTTTATATGCCTTACGGAACACGCTACCCAACACTAGCCTTCCACACAGGAGGAATAGGAGAATCCGATGACGGGATGCC
23Chlamydophila caviae GPIC
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,873,600
1
CAACCTGTCGGGGCAGCTTGTCACGTAGGGTTGAGGCAGATGGGGGCCTGAGGGGTGGGTGTCTGGGTGTAAGGAATGTGTTTGGAGGAGGGTGGGTGCCGCTGGAGGGCCTGGGGCAACTTCTTGGCCACCTTCACACCCGGTGCAGCA
120homo sapiens
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
2,507,310
0
TGCACCGCCAGTTTCTCGTTAGACTGCCCCATTTTCACGCGGTAAGTGGGTAGTTCTTCTACAAACATCACGGCGTGCTTAGGCATTTCAATCGGAATGACGTCCCCAGGTCGAAGTTCCATCAAATCGCGCAGCGAGATATCTTTCTCC
108Vibrio vulnificus YJ016
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
299,650
0
GGGATCACCCGGAGGCAACCCGAAGGGTTGCCGCGGCCCGGTAGCGGTCCGCGCAGCGGACGGCGATAGGGCGTTCCCATTCCGAACACGGAAGTTAAGCCCTCCAGGGCCGAAGGTACTCCGCAAGGGGGAGAACAGGTCGCTGCCCAG
99Symbiobacterium thermophilum IAM 14863 IAM14863
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
1,715,610
0
AGGGTGTTCTGGCACGTTCACTGACCCGGGCAGAGATGGATCCAAACAGGGCATACACCTTCGCTTCAAGGATTGAGGCTCACCTTAAAAAGAATAAGGTGGATCTGATAACCATTGAGGAACTGGTTGAAATCGTCTCTGAACATCTCA
62Methanothermobacter thermautotrophicus str. Delta H
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
815,250
1
GGCGACAGAGCAAGACTGTTGGATTGCTGTGGGCCAGGTGCAGTAGTGGACACCCACAATGTCCACCAGCAAGAGGGAGGGTGAGGAGGGAGGACTGTTTGAGCCTGGGAGACAGAGGTTGCAGTGAACTGTGATTGTGCCACTGCACTC
120homo sapiens
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
1,000,740
0
TTTTGGGAATAGAGCTTTAAAAGGTAATTAAATTATGGCTTTAAAAGGCAAAGGGCAAGCTAAATCTCCTAATGTTGATGATAATCCACAATTAGGGTTAGAATCAGAAATTCCAGTTGCTCCTAGATCTAAACGTCAAACAAGACAGGC
14Borrelia burgdorferi B31
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,903,330
0
TTCATAATAGGTCGGAGAAAATGTCACCAATAGTTGGGAAAAGCTTGGCACCATAAAGTTATCTGCATTTTCCCACCCTGTTGCGCGGTTAAGCAGCGGATGCAGAAACACGTATTCTGAATACACAGGAATGGCGGCTATGCCTGCCAA
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,587,600
1
AAGCTTCAGCCCTTACTCAGTAGGTAACCTCAACTTGTCTCATTTGCAAAAAAAACACAATTTGGATAACTATATAAAGTGGAGATAAACCAGTGAGTTTATATTTTTCTGTTTTACTGTTTCATGGCTAAAATTTTTTAAATTAAAAGC
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
5,164,250
0
AAAATTGCAGCGTGGTCTGAATATGGTTTCTGCTGTGATTATGTGGGGAGTGGCCTTCTATATGGCAGCCCAATTACTCATCTCGTAAAGAGTTCATGAAAAAGTGAATAATCCCCATCCCCTCCACTCAAAATACTCCTATTCGGGTTT
15Brevibacillus brevis NBRC 100599
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
1,663,870
0
TAAACTTAAATTTTTAAAAAAAAAGAAAGAAAGACAAACTGTTGAAATGCCGGCACCGGACGGTTTAACTTGATATAAACGGGAGGTATTTAAAATGAAAATTGCCATACCATATAAAGACGGGAAGATAAACGGGCATTTTGGAGGCAG
73Pelotomaculum thermopropionicum SI
G000010205
ASM1020v1
GCF_000010205.1
PRJNA224116
SAMD00060919
null
2008/05/29
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
642,555,145
RS_GCF_000010205.1
Monoisolate
Complete Genome
Full
na
Major
334,380
784
Orientia tsutsugamushi str. Ikeda
strain=Ikeda
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Orientia
Orientia tsutsugamushi
true
Eubacteria
Proteobacteria
0.99
1
0.9
1
2,008,987
1
30.51
2,008,987
1
2,188
522,417
76.576503
99.51
0.49
0
186
yes
yes
yes
20
high
1,452,360
0
TTGTAGTTCCTGCTGTAGGAAGTTATAAACTAGGCATTGACAATATAGTAAATCAAATCTTACCAATAAAATATTCTTTATACAATTCAGAATTAGTATGGAGTACTATTAAAATAGCTTTATGTTTCTCTATTATGGGATTTCAGCCAA
72Orientia tsutsugamushi str. Ikeda
G000009025
ASM902v1
GCF_000009025.1
PRJNA224116
SAMEA3138187
null
2005/08/19
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/025/GCF_000009025.1_ASM902v1
637,000,090
RS_GCF_000009025.1
Monoisolate
Complete Genome
Full
na
Major
255,470
61,435
Dehalococcoides mccartyi CBDB1
strain=CBDB1
null
Bacteria
Chloroflexi
Dehalococcoidia
Dehalococcoidales
Dehalococcoidaceae
Dehalococcoides
Dehalococcoides mccartyi
true
Eubacteria
Chloroflexi
0.97
1
1
1
1,395,502
1
47.03
1,395,502
1
1,437
426,285
89.985038
99.01
0
0
259
yes
yes
yes
20
high
320,710
0
GCTACTTATCTGCCTTTGCCTGAAGTATCCTCCGGTACTGCAGATAACTCTGCTGCACGCCTTGTCCTGAGTGAACTGGGTAAATATGATGTACTCCTTATAGGGCCGGGTCTGGGTCAAACCGGGTATTCCGCCAGACTGGTTACCGAA
34Dehalococcoides mccartyi CBDB1
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
952,900
0
AAACTATCCATTTTTGCAAGTTTATCATATGTGATACGAGCAAGATTAGAGGGCATGTTAAAAACATCAGATTTTATAAAAGCGTAATAGGAAAGTTGACCATCACCCGAACCAGAATTGCCTAAATTTTTCTTTGACCAGATTTCTGAA
94Streptococcus uberis 0140J
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,499,900
1
TCCATCCTTACCCCAGGGCCACTTCTCTCTACTCAAGATGGATGCTCAGGTGCACGGCCCAGAGCTCTGCCCACCAAGAGGATGTCCCCGGACCCTGGTGAACTTCTAGGGCATCTAAGAAGTTAATTTTGACCATTTTATTTGCCAGGA
120homo sapiens
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
3,119,090
0
CTGGCTAGTTGGGTTCTTCATATAGTTGAATCCCACCAACGTTTTCACCCCTTTAGCGCGTGCTGCCTCGGCCATTTCTTTGGCATCTGCGGCATTAAGTGCCAGCGGTTTTTCGGAATAAACATGCTTACCATGGTTTATAGCCGCAAG
115Yersinia enterocolitica subsp. enterocolitica 8081
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,122,750
1
AAAAGCTTAGAAACGGCCGGGCGCGCTGGCTCACACCTGCCATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACAAGGTCAGGACATCGAGATCCTCCTGGCCAACACAGTCAAACCCCATTTCTACTACAAAAAATTAGCCGGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,601,300
1
CTCCGCCACCTCCCACTGAGGGACCCCGAATGAGTCCTCAAACTGCCTAGAACTCCTATTCCTGTAACATACAGACAGTGACGACCACCTGGCAGGGCTGCCAAGGGGCCGGGAGAGATGTGTGCCCGCTATGTGGCTTCAGCTACACCA
120homo sapiens
G000008665
ASM866v1
GCF_000008665.1
PRJNA224116
SAMN02603985
null
1999/12/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/665/GCF_000008665.1_ASM866v1
638,154,502
RS_GCF_000008665.1
Monoisolate
Complete Genome
Full
representative genome
Major
224,325
2,234
Archaeoglobus fulgidus DSM 4304
strain=DSM 4304
null
Archaea
Euryarchaeota
Archaeoglobi
Archaeoglobales
Archaeoglobaceae
Archaeoglobus
Archaeoglobus fulgidus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,178,400
1
48.58
2,178,400
1
2,518
688,447
93.086761
100
0
0
186
no
yes
yes
17
medium
1,922,960
0
AGAAAGAGTAGCTTTTAGCATGCACGGATGCGAGTTGCTTCCTGGCACTGCAAACACCTGCGGGATTTGCTGCAGCGCTTAAAGAAAGGAGTGTTTGCATTGTATTGGCGGGAGACGAATCGTACAACATAAGTAAAAACGCCAAACCAA
3Archaeoglobus fulgidus DSM 4304
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,280,450
1
CCCTCGGACCGGTCTTGTTCTGCCTGCCCTCGCCCTCACACGGGATGTGTCTCTCACACCTGGTGCTCTCATCCGTGGCCTCTGCAGTCTGGCTGTGGGTGGACCTGACCCTGAGAGCAGGAACGAGCCCTGCTGCAGCCTGGAGTCCCA
120homo sapiens
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
2,162,550
0
AACCAGGGTTTCCGGCTCAGCAATTTCACGATCTTTATCGGTGTGAAGAGTGGCAATAATACGATCGCCATGCATGACTTTTTTCATCTGTGGCGGCGGAATAAAGTAACTTTTCTGCCCGTCTACCTCAAGAAAGCCAAAGCCTTTCTC
115Yersinia enterocolitica subsp. enterocolitica 8081
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
2,009,800
0
CAAGCGGTCTCCAGTTCTGGGGCAAAGGCTGGTAGGGCCGTTTCTCCCAGGATTTGCGATTGGAATTGCAGGGTGATCGTTGAATAGGCGACACGAGTGCGGAGGTTGAGTTGTTCTGCTTTGAGCTGCTCGATTTGTTCCCGCGTGCTG
100Synechococcus elongatus PCC 6301
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,862,500
1
GTCCTAGTGGCAGGTCACCCAGTGACTGGCATTCAGGAGCTAAACTGATTGATGGTAAACTTGATGATGTCGCCCTTCTCTGCAGTTTTTGGACAGGGATAGCAAACATGTCAGAGGATGACTCTCAGGTGATTATGAGCTTCCCTGTCG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,088,250
1
GAAATCCATCTCTACTAAAAATACACACACACACACACACACACACACACACACACACACACACACAACCGAGCGTGGTGGCGCATGCCTGTAATCCTAGCTACTCAGGAGTCTGAGGCAGGAGACTCACTTGAACCCAGGAGCTGGAGG
120homo sapiens
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
1,265,810
0
GCCTCCACCGCACCGCTGTACCACCAGTTGGTGCTGCTGGGGACCGCTCCGGACCCTCGGCTGCCCGCCCGGGCCGCGACCACGGCGACGCTGGCCGCCGCGGCCGGCGCGTTCGGCCTCCCCGTACCGGAGGAGTGATCCCGGGCCCCA
96Streptomyces griseus subsp. griseus NBRC 13350
G000010785
ASM1078v1
GCF_000010785.1
PRJNA224116
SAMD00060961
null
2010/02/11
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/785/GCF_000010785.1_ASM1078v1
646,311,936
RS_GCF_000010785.1
Monoisolate
Complete Genome
Full
representative genome
Major
608,538
940
Hydrogenobacter thermophilus TK-6
strain=TK-6
null
Bacteria
Aquificae
Aquificae
Aquificales
Aquificaceae
Hydrogenobacter
Hydrogenobacter thermophilus
true
Eubacteria
Bacteria
1
1
0.8
1
1,743,135
1
44
1,743,135
1
1,905
573,308
96.888881
98.78
0.51
0
310
yes
yes
yes
20
high
556,270
0
CGCACTTTTGAAGGGCTTCCCTGCTTATGCTTTTTATGCTCTGACTTTTCTGTCTCTTGTTATATACCAAATAAGGTGGAATATCCTAACAAGTAGAAAAGTCCTTCTTGTGCATAGCATTAGCCTGATCTTGCCAGCTTTGTGGCTTGT
49Hydrogenobacter thermophilus TK-6 ASM1078v1
G000010565
ASM1056v1
GCA_000010565.1
PRJDA19023
SAMD00060921
null
2007/05/07
Marine Biotechnology Institute Co., Ltd
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1
640,427,128
GB_GCA_000010565.1
Monoisolate
Complete Genome
Full
na
Major
370,438
110,500
Pelotomaculum thermopropionicum SI
strain=SI
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Peptococcaceae
Pelotomaculum
Pelotomaculum thermopropionicum
true
Eubacteria
Firmicutes
0.98
1
1
1
3,025,375
1
52.96
3,025,375
1
3,001
887,464
86.415667
100
0.63
0
331
yes
yes
yes
20
high
2,977,260
0
CCACCAGCGAGGCTTCCCGGCGATGCGTCTGGGGCGTAGGTGGCTGATAAACCGCGACGGCCTCAGACGCTGGCTTGACCGGGAAACCACCGAAGAAAAATAAAAACCCCCTAGTAAATGGGAGGATGGACGGCAAAGGGGCCTTTCGCC
73Pelotomaculum thermopropionicum SI
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,168,600
1
CCTGGGTGGCCAGGTGTGCCCATCAGACCTCCAGCCAGGTGAGGGTGGAAGTCACCCAGGAGGGCGACCTGCTGGGAGGTATCAGAGCCTGGCAGGGGTGGAGAGGAGGGAGTCCTCTCAGGGAGTCAGAGTGGAGTGAGAAAGGCAATT
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
742,690
0
GGAAAACACGCTTGCGCTCTTCGACTGCGGTGTCGACGACGTGGTCCGCAAGCCGGTGCATCCGAGGGAAATCCTCGCACGCGTCGCAGCGATCCGCCGGCGTTTGACGGCCATCGCCAACTTCACGGATATCGGTCCCATCCGCGTTTT
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,106,550
1
CTTCCCTCAGTGCCACCGCATCGTCCACACCCCAATGCCCCTACTCTGTGATTTATTTTCCGCTCAGCACCTGTTAGCCTGTCGTCCATGCTTTGTGTTGACTCAGGTTTTGTTTGCTGGTCTCCTCGGGCTCCCCCTGGAATGTGAGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,156,700
1
CAGCACCCTGCACCCCGAGGTGAGCATCTGACAGCCTGGAACGGCACCAACACCCCCAGGTGAGCATCTGGCGGTCTGGAGCAGCACCGAGAACCACAGGTGATCATCGGAGAGTCTGGAGCAGCACCCACAGCCCAAGTTGAGCATCTG
120homo sapiens
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
1,827,020
0
TAGGTATAAATTGTTTTATTTTATCCTTTATGCCTTTATATAATGTTCTACTTTTTCCTGATATCTTTATTCCCATTTCTCTCTCATCATCTTTAGACATTAACATGTATTCGGGATTACATAATACATTTTCTATAACCTCAAATAGTA
30Clostridium tetani E88 Massachusetts substr. E88
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
3,137,940
0
CCTTGGTTTGTTCCTCTTCTCGCCCGGTTTCACCCTGCGTCGTCTCTGACTCTGTCGAGGTTAAAATTCGCTTGAGTGTCTGCAGATGATTATGACCCCTCGCCTGATGAGATGTTTGAGTGTTTCTGTCTGTGTCTGAGTCCGAACTCA
45Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,776,550
1
ATGACAGGGCTACTCTCAGAATGCCAAAGGGCGGGTCACCAGAGGAAGGTGGGTTTCCTAGGGTGAGTGCAGTTGCGATTCTGACTGTGTACATGACAGTGTTTGAGAGAGTCCTCTCTCTGTGGGTCATACCACTTACGATGTGGGAAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,971,300
1
TTTCATAAACTTTATTTGTTAGAGCAATTTCAGGTTCACAGCAAAACGGAACAGAAGGTATAGGGATTTCCCATATAGATGGGTCTCTGGATTTTTCAGCTAATTTTGAAAAATAGGGAAAAGAGCAATCAGCATTTTGTGCTCACTACA
120homo sapiens
G000010125
ASM1012v1
GCF_000010125.1
PRJNA224116
SAMD00061076
null
2005/08/12
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/125/GCF_000010125.1_ASM1012v1
637,000,284
RS_GCF_000010125.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,451
29,385
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
strain=ATCC 15305
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus saprophyticus
true
Eubacteria
Firmicutes
1
0.992
1
1
2,577,899
3
33.19
2,516,575
1
2,502
730,892
83.519176
99.44
0
0
348
yes
yes
yes
20
high
328,900
0
TGATACCAGCTACATTTTCTGAAGATAAAGTGGAAAATCAAGGTGGAGAAACACCAATGGAAAGAAGAGGACAGCCAGCAGAACTTGCGCCTTCTTATGTATTTTTAGCTTCCTATGCGGATAGTTCGTATATCACTGGCCAAGTGATTC
90Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 ASM1012v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,036,500
1
TATTGACACTCAAAATTCACACCCACACTTACATGCTCACCCTCTAACCCTCTCACATTCACACACTCACACTCACTCCCACACTCACACAACACACACGCTCACACTCACATACATAACACCCTCACAGTGGCACACTCACCGATACAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,141,050
1
AGGAGGGAGCTGTGCAGCCTGCAAAGGGGGAGCTGCTTCTCAGGGACGTTTCTCTGCCAGATTCTGCAACGGAGAAGCATGGAGGGCACAGCCCAGCCAGGGGTTGTGCAAAAACACACACACACACGTGCTCACATGTGCTCACATGGC
120homo sapiens
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
4,786,730
0
GGCTCGCGGCCTGTGCCGCCTTGGCGAAGGCATCGCGGACGGCGAGGCCGGTTTCGTGCGGCGGTTTGCGCGAGCCGTCGGCCGCAATCGTCGCGATGGCGTCGAGCTGGTCTTTCAGCGCCTGGCTCAGTTTCCTGGTCTGGGAGCCCT
81Ralstonia solanacearum GMI1000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
279,300
1
TAGGCCTTCTCGGCCTAAGGGCAAGTCCCATTCTTCCTTGATAGGTCTTTAGATGTACCAGTCAGCAAATGTCATCCCCCTCTGCATTCACGTCAAGCTGTGCAGGGAATGCTAAACAGAGGCAGATCTAAACTTAGGAGTTAGGCTTCT
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
3,734,770
0
TAAAAATGCCCGTACTGAATCGGCAGCGCTGGCTCCAGCGTGTGTCTGTCTTCCGCGACATTGAAGGGTGCGCGGTCATACAGTTCACTCACCCAATGATAAGCCGCTGCCGCCGTGGTGAGTCCGGCCGCACGCGCGAAGTAGAAAATA
87Sodalis glossinidius str. 'morsitans' morsitans
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,234,000
1
GGCTTGAGTTACTAGGTAGTAAGGCTGTTTGTGGAGCTGAGGAAGACTGGGGAAGAGGCAGGCTGGGGAGGGGAGTGACCAAGGGTCCTATTTTGTAGAAGTAGAGTTTGGTCTTTGTTGGACTTCTAAGTGGAAGCACCTACTGCTTCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,448,450
1
GCGGGTCATGAGGAGCCCAGGGCCTGGCCGCTGCTCCAGGGACCTGGTTGAATGGCCCGAGTCACTGTTGACGGCGTTTGAACACCAGGAGGTGTGGGTGCCGGACAGCTGCAGCTTCTGTTTCTGATAGAGCCCTGGGCACCACGATTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,620,400
1
CCCTCTTATGACAGCCACTGGATTAGGGACCACCGTAATTGAGTATGAGCTTATTTTAACTTGCTTACGTCTGCTAAGACCCTCCTTGCAAACAGGAGTATTATTTCTTTGTTTTTGATCTGCATCTCCTCTTCCCTTTGAATGTAAGGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,593,250
1
GAGGGCGTCCCCTCCAGGAATGCCACGCCTGGTCGTGGGGTGTCTGACCCCTCCACAGGGATGCTGCATCTGCCTTTAACTCAGCACTTGTTGTTTTGACTCCACCCCCTCCCACAAGCATCCGGAACTCCTCTCTGTGGCTGTGTACCA
120homo sapiens
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,103,310
0
TGACCGGGGCGGAGTGGGAGAGCCTCTGCGATGGTTGCGGGCTCTGTTGTCTCAACAAGCTCGAGGATTGGGACAGTTCCGAGATCGCCTGGACTTCGATCCGCTGCACGCTGCTGGATGGAGAAAGCTGTCGTTGCAAGGACTATGACA
86Sinorhizobium meliloti 1021
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
1,691,170
0
CTATTTATCAGTCGTTAAATCATTTGGCTTCTTTAGGATTAACAGACTTTTCAAATCCAAAATTTGAAAGCTATGCTCCAAAATTTTTCGATTTTACCGTAGTTAGAAAACGGATGACAGAAATGACGAAAGATGAACTCGCATCTTCTG
7Bacillus cereus ATCC 14579
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
2,112,630
0
ATATTGCTCAAATTGATGTCACCGTTACGCATACTGAAACGGAAGCATTGTTGCTTGAGCACAATTACATCAAGCTTTATCAGCCACGTTACAATGTGTTGCTACGTGATGATAAGTCATATCCGCTTATTTTCTTGAGTGCGGATGAGC
116Yersinia pestis CO92 ASM906v1
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
4,772,300
0
TGCTTCCTCTGTATGAACAACAATTGAAGAGGATTGTTCTCTTGTACGAACTAAATTTCGCATCGTATTCAATCCTTGCTTAGATGCCTCTTCTGCTTTGCCAGCTACTCCTTTTATTTCACCAACGGAGCTATTCATTTGTTCCACTGA
118[Bacillus thuringiensis] serovar konkukian str. 97-27
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
191,230
0
TCCGTGGCCATAAATGCGGTGAAATTGGAGATCCCGGCCTTGGCAGCGGCATAGCCGGCCACACGCGTCAAAGGGCGGAAAGCAGCCATGGATGAGAAATTGACGATAGCGCCCGCTCTTTGCTCCACCATGGGTTTCAGGAATACTTGT
10Bacteroides fragilis YCH46
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,295,300
1
GGGCCTCTGAGGCTTGGGCTCCTGAAGCACAAGCCATCACTTCTACCATATTCTACTGGTCCCAGCAAGGCACAAGGCCATGCCAGATTCTGTACGGAGAACAGACCCTGCATCTTGCTGGGAGGAAAGCAGGAATCACAGCTATGCTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,607,800
1
ATCTCATCAATTTCTATTGTTTTTCTGCTTCTCATTTCATTGATTTCTACTCTGGTCATTATTATTTTCTTTTAGTTACTTAGGGTCTAATTTGCTATTCTTTTGCTGATTTCTTAAGGGGGAAGCTGATGTCAAAGATTAAAGGTCTTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,702,150
1
AAATCATGATACAACTCACCATAACGTAGAATCAGTGACAGCCCTGAGATTGTTTTCCTGCAATCAGACGGTCCCATCTGGGGGTGATGGCAGACAGTAACAGATCATCAGGCATTAGATTCTCATAAGGAATGCAAAACCTAGATCCCT
120homo sapiens
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
8,303,360
0
GGGCGGGCATACGGGGCGGCAGCCACGCGCGCCAGAAGCGGGCCAGCGAGGCGGTGCTCGGCGGGGCGGCGACCGCACCGACCAGCCGCAGCCGGTCGGGCCGTTCGGCCGGCGGGCTCTCCTGGACCAGCCTGAGCGCGGCCTCCCGCC
96Streptomyces griseus subsp. griseus NBRC 13350
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
1,523,080
0
ATGCCTGTTTTTTTCTTATTCATTTATCTCTCCTTCTTTCCTTTGTATTTCCATAATAATACCTCCAAATTAAAAATAAAAACTTATAATTGATTACTATTATCAATTATAAGTTTTTATTTATAGCTTCTCTACTCAAATTAGGATTGT
30Clostridium tetani E88 Massachusetts substr. E88
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
277,500
1
TTATGATGAATTCTTTTCAAGTTAAATGCTGTAAAGAAAATACTTCTCTTTTTTACTGTTAATTCACAATTTAAAAGTGTTTTCTTACTGAACTACATGTTGGTCCCTCAGATAAGGATTTCTCGAGTCTCAGGTCTTTGGGGTCTTTGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,613,300
1
ACAGTCCTCCTTGAGAAGGGAGAGTGGTCGGGGTCTGTCCTGGACAGGCCCCGGCCCAGTGCCATTTCCTGTCCCCAGCAGGGGCAGAGCTGGTGTTTCTGCAGCCATCAGCTATGCCTGGTGCCTGTCCCTGTTAAGGGACGTCAAATC
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
6,079,970
0
GCCTGATCTCCATAGGGCATTTGGAAAAAATGCGATCGCCAATACACCCCTTTTTCTACCCAGCGCAAACCTGCCAAGTCTGCATCTATCCGCAACGCAAAGGCGCCAGCCACCACCCCAGGCTGTTGTAACGCGGCGCGAATCATTTCA
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,629,800
1
AACCCCTCTCTGACCAGAAACATGCCAACCCCAAGACAGCCTCCCCTCTGACCAGAGACATTCTAACCCCGCAATAAATTTTCCCTCACATAGAAACATTCTGAACCTACAATAAGCTCACCCACCTTCCAAAAAACCCTTAAATATCCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
457,950
1
GGGGGTCTGTCGCTGGCCTGAGCCTCCCTGCCCCGCCGTTTGGCAGCCACCTTGGCCACCCTCACACTGGGCTCTAGGAGAAGCAAGCCCCTGCGTGTCCGCAGGTGGGAGGCTCCCACGCACCCCCCGCTGGAGAAGCACAAGCACAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,639,450
1
CTCAAGCAGTGGCCTCGGTTTGTGTCAGTGGGCTAAACAGATGAAGAGGGGAATTAAGTCCGGGCTCGATGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTTGAGGTCAGAAGTTCAAGACCAACCTGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,659,050
1
GGGCTGAAGCAGCCCAGCAGGGTGACCTGGGGCTGCAGGCGGCGGACGCTGCTTTCAGTTGATGTTTGTGCACAAGGAGCCATAGCCCAGACTCTGGGTTTGAGCAAGGGGCCTGGCTCAGTGGGCCCACGAGAGGAGCATTTTTAGCCC
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
1,089,140
0
CCGTCGCCGTCTTCGGCGCCAGCCGTGTTTGCACGGTTGCCGAGCAGGCGCGTCTGCCCTCTTTTTCATGATGCCGTGTTGACTTAAAACCGCAGGCGCCGTCTCTGCGCGGACGTTCTAGGCGTCGTATTCCATGCTCTTGCCGCCCCT
87Sodalis glossinidius str. 'morsitans' morsitans
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
1,740,830
0
CTGGTCCAGTGTCGTCCTCCCGGCTCTGACCTCCGGAAAGAGCCTGACCGAGACGCTGCCGGCCTGGCAGCGGGAGATCGCGGGCGAGGCCAAGAGCCAGGGCTACAAGGTGGTCGATCAGTGACCTTGCTGGAGACCGAGCCTGTCGCC
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
918,060
0
TGTCTGTCTTTATTGTAACAAAAAGATTGTGAAAAATGCAACATTTTGATTGTTTTTGTATGAGTTAAAAAAGCTAAAATTAGTTTTAGCACTATATAATAGTATTCATTAGGAAAGTAAGTTATGACAGTCAAAATGAACAACATGAAT
93Streptococcus pyogenes M1 GAS SF370
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
1,455,870
0
CCACCTTCTCACCCTGGAAGGAGTGCCGCGTACCACGCTGCTGCAATTGCTCGACCGCGCCGGCCAGATCCGCGATGCGGCGGTGGGGCGCGTGGGCAAGCGCAGCGTGCTGGCGGGCACCGCGGTGTGCACGCTGTTCTTCGAACCCTC
113Xanthomonas oryzae pv. oryzae KACC 10331
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
983,710
0
CAAAATCGACCCGTACAAACATCAAGAAGATACGCTTGCCGCAAGCAATACGCTCTTTATGCCCAAACAGGGGCAACAGATGGATTACAACAAGATGGAGGTCGCCGAGCAGGTATTGAGCAAGGTCGAAATCGCCAAACGCTTAAAACC
66Neisseria gonorrhoeae FA 1090
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,877,150
1
CCCCACCCCAAGCTGCATCAGCTCAGCCCATCATGAAGAATTCCTCCCGCATCTGCTGTGGGGTGCCACGTTTACAAGCTCTGCAGTGTGTCACCATCTAAGTGGCCAGAGAAAGGTTATGAATGTGACACTTCCCAGGGCCTCGTGTCA
120homo sapiens
G000009965
ASM996v1
GCF_000009965.1
PRJNA224116
SAMD00061071
null
2005/01/05
Kyoto University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/965/GCF_000009965.1_ASM996v1
638,154,520
RS_GCF_000009965.1
Monoisolate
Complete Genome
Full
representative genome
Major
69,014
311,400
Thermococcus kodakarensis KOD1
strain=KOD1
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Thermococcus
Thermococcus kodakarensis
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,088,737
1
52
2,088,737
1
2,314
650,473
91.73242
100
0
0
190
no
yes
yes
19
medium
2,061,410
0
GTCGCTCTTGTAGAGGTAGGGTATCCGTATCACTTCGGCGTTTATCCCGTGCTTTCTCAGTTCCTCCTTCAGCTTTTCACAGTTGAAGAACTGGTCTGGGCCGATTGCTATGACGTCAGGGTCTATTCTCTTCACTAGCTCCATGTCTAT
102Thermococcus kodakarensis KOD1
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
86,710
0
GTCAATTAGAAATTCTCTATTTACAGCAACTGTTTCAACCCTCCTGGGAATTCTCTTTGGTGTTCCCTTGGGCTATGTCTTAGCGAGAAAGGAATTCAAGGGTAAAAATTTTGTTCAAGCTCTTATCGACACTCCAATTGTAATCCCTCA
80Pyrococcus furiosus DSM 3638
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,564,650
1
CCTGTGAATCTGAAATTACCCCCAAATAAAAAGGATGGGTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTGAGACAGGGTCTGGCTCTGTTGCCCAGGCTGGAATACAGTGGTGTGATCTCTGCTCAGTGCAGCCTCCACCTGCCAGGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,033,900
1
TGCCATAAACATCCATGTGCAGCTTTTTGTGTGGATGTAAGTTTTCAATTCATCAGCTGGATCGTATAGTAAGAGTATGTTTAGTCTTGTAAGAAACTACCAAACTGTCTTCCAAGGTGGCTGTGCCATTTTGCATTTCCACCGGCAATG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,444,050
1
TGGAGGTTGCAGTGAGCTGAGATTGTGCCATTACACTCCAGCCTGGGTGACAGAGTGAGACTTTGTCTCAAAGAAAAAAAAAAAATGCTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGAGAGGCCGAGGCAGGCAGATCATG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,120,450
1
GGACGGGAACAGCCTGAGGGCCCCTCTGTGGCCCCTGGACGGGGAGGCTGTCAGACAGGAGGCCTTCACCTGGACCTGGCCCTCGCCCACCCACCCCTGCCAGCAAGGCCAGGGAGTGCTGGGTGGGGGCGCCAGCGACTCCCCTCCTCC
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
3,916,770
0
TTATGCCATCGGACTACCCCGGTGACACGCCCCTACCGGTCCTCATGGACCCCTACGGCGGCCCGCACGGGCAGCGGGTGCTGGCCGCGCACAATCCGCACCTCACCTCGCAGTGGTTCGCCGACCAGGGCTTCGCGGTGGTCGTCGCGG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
57,460
0
ATGGCCGTGTGATTGGTGAGTACGTCATTCTGGGCCTGTTCACCCGCCAGGCGTACGCACTGCCCGCTATTGAGACTCCGCTGGTGCGTGAGCGTATCGCGATGGTGCGCCGCCGCCTCGGCTACCACCCCGGTTCTTACTCTGACAAGG
84Rothia mucilaginosa DY-18
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
628,940
0
TTTGAATCGCTGTCTTTTATCCCGAGCCGGGCAGGTTTTCCGGGGGTAAGGGTTGCTGTGAGGGATACAGGGATCTTTGGCCTCAGGGTTCCTGATTCGCTTTCTTTTTTCAGGGAATCCATAAGCTTCTTGTCATGAGTCCTGTAGACC
61Methanosarcina acetivorans C2A
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
2,452,060
0
CAGTGCTTTCAAGGGATTCATCTCGTCCGTATTCAAGACAATCAAAAGATTAGCAACTTAACGGATGAGAGGCGCAACATTTTGAGATTTTTTCCCAAACCTTGCCAGGAATATTATCTCTTATCTTGACCAGATGGATTGACTTCAAGG
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,728,750
1
CTGTCAAAAAAAGAAAAAAGAAAAAAAAGATACTCTCTTATACATGCAGTATAATGATCAAAATCAGGAAATCCAACATAAACAGAATGCCCTTATCCAGCCCACAATCCACACTTGAATTTCATCACCCGTCCCTGCAGCTTTCCTGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,378,150
1
TGCGAGTGCTCAGTGAACGGTGGCTCTCATTCTAGCTAGGACCGTTACTGGGCATCCCACAACCCCCAGGGCATGGACAGGGTAGATGTGGCTGACCCTCCTCCTCTCCTCTGCCCTCTACCTGGCCAAATCCTTCTAGTTCTTTGAGTC
120homo sapiens
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
940,810
0
GTCTGAGCGAGTTCGCGCTGCACGCCCGCGCGATTCTCGGCCTGCCGATCACCCCCGAGCATGTGTCGCTCACGATTCCGGCCGGCTCGGTGGCGGCAAGCCATGCGATTGTGGTGGCCGGCGACGGTGAGGTCGAGTTCACCGATGTGG
13Bifidobacterium longum NCC2705
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,058,450
1
AGTTCATGCCTCCTTCATGCCTGCATCCTGCCTCTACAGCTCCCACGGCATTCCCAACATAGGATTTCCCGTAGCCTTGTTGATGGGGGAAACCCCCAAGGAAATTCACCAGATGCTGCAGATCAAGGGCTGCCTGAGGATGTAGTGAGC
120homo sapiens
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
1,447,940
0
TAAGAATAAAAGTAGTCTAAGCTCTTATTTAAAGCCAGAAGTAGATAAATTGGATCTTGGCTCTCAAGAGCATTCATATTTTAAAACTGAAAATATTAAAAACACTTTTAAGCAGAATTTTGTTAATAATTCTGGTGAAGCTCAAACTAA
14Borrelia burgdorferi B31
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
267,900
1
TAAAAATTATTTTAAAAAACAAAAAATTGTGGAGTTGAAAAGAACAATAACTGAAATGAAAAGTTCACTCAGGGGCCCAGCAGTAAATTGGAACAGTCAGAAGAAAGAACCAGCAGACTTGAAGTTATGTCAATAGAGATTATACAACCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,184,400
1
TACCACCTGCCTTGGCTCCTTGGTGTTGCCAGACCCTGAAGGCAGCCCATGCCCTGGCTGAGATCCTTCTGGGGCGGGATGTGCTGGAAGCAGCTGAACCACGTGGTGATGTACCAGCTCCTGCTGTCCCCTACATCCCCAGCACCGCCA
120homo sapiens
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
4,503,980
0
TTGCAGTCTCTACCTGGCGGGCATTGAGTTTCATTTGGGGGCATCTCTAAAATGACAGTATTTTTATGCCCCCAATTATGCCCCCAGCACAGGGTAGAAACCAGTAGACCACGGTAGATTCAGACAGACTACTTTCGTTGCAACCATTGG
115Yersinia enterocolitica subsp. enterocolitica 8081
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
1,700,270
0
GAAATTTATATTGAAAATTACATCGAAGTTTCGAATGTTTTTCTCGGAACGAGGAGAGGAAATTCCATTTACGATACAAAACATAGCTGAGCGAGATGAATATGCACGAGAATTAGTAAGGTGGAACCGTACTTTTTATTTCCATAATAA
7Bacillus cereus ATCC 14579
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
982,410
0
CGGCCCGTCCGAGCGTCGACGACAAGCGAGGCGTTGCCTGCCATTGCCTGAACGGCACCGAAGAAAAGCACGGCGATCGTCGCCATAGCCAATCGAAAGCTCGTCATCGAACTCCCCCTCATAGAGATGTGCGGCCGATATCGACGCGGT
86Sinorhizobium meliloti 1021
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
2,465,450
0
TTTTATCATCCCAACAGCGGTTGCGCCTATCACTGTCCATCACATCCAGCGGTAAAAGATCAGCCTGATGCATACTAATGGCATTGAGTACCGAATGACGCCCTGCGAAATGCTCTTCTGGTAGATATCGGCAATCCGAACGCGGATACG
115Yersinia enterocolitica subsp. enterocolitica 8081
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,067,800
1
CTCCAACCTGGACAAAGAGCTAGACCTTGTCTCTTAAAAAAAAAAAAAAAAAAAAAAGAAGAAGTCTACTTGCAAACACTTGTGATAATCACACTTACAAACCCAGTGGCTTGGGAGTGGGACGGTGGGAGTATGAAGCCCAGACACTGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
883,800
1
ATTTTTTTCCCTTTCTCTTAGAATCTCTTCTACAGGCTTATTTTTCTAGTTCTTTCTTTTGTAATTTGTGGTTAATATCTGGCCAACTGTTAGTGACAAATTCCTTGCCCAAGAGGATCCTCGACACCTCGACCAGCATATTTTCTCATT
120homo sapiens
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
793,390
0
CGTTCGGGAGGGAGTACCGATGTCCGACGTCGACGGTGGCCACGCGCGGGGGCCGCGCCGGGTCGACGGCGAGCTGATCCTGTTCTGGACACTGCCGGTTGCCTTGGTCCTGTGGATCGCCTCGTTTTTCCTCTTTCCGGGCTTCAATCC
65Mycobacterium avium subsp. paratuberculosis K-10