#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Sulfurovum sp. NBC37-1 ASM1034v1
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
936,910
GAATATGAAGCAGACACTCTCTGACCTGCTGAAACTCTTTTCAAAAGAGAACAGTCCGGCTAAGTTGAAAGCTATGGACAGCGGAGAACATGCGGAAGTCGCAGCTGTAGAAGAAGAGTAGTCTGCAGGGTGGATCGCATCCACCCTGCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,245,200
ATGTACTGGAAGTAATCTTAAGGATAACTCAAAACCACAACTGAAATCAATATCCTAAGAATTCAAAATATTAACCAGACAGATAATTGTATGACTTATTAAAATAATGTACACAAATTCAAAATATAATTTTGCCCTTTATTATTATTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,835,850
GCAGTGGAGGAAGGATCACCTTCTGACTTATGGATACACATGCAGAAGTGAGCAATACGTATACCTCACATTTCTGTGGGGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGAGGGAGTCTGGTGCTGTTGCCCAGGCTGGAATGCAATGT
11
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,161,810
TACCGAGGTTCGTCCCTTATCTGAAAACGATCAGGAAGCGGTGTCGCTCATGACAGGCATTCGCCAATTGTGGCTAATGGGTCTGTGCATGCATGATCCTCATATCATGGGGAGCAGCGATTCGGATGATGCTTTCGTGAGTGAGAAGAT
0no label
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Methanothermobacter thermautotrophicus str. Delta H
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
26,780
GACAGGGGCAGGTATATGCTCAGAGGATGCCATTGAACTTGAATCCTGTGGTGTATCAGCCATAGATGTTGCAGGTGCAGGCGGCACCAGCTGGGCTGCCGTGGAAACATACCGGGCGGATGACAGGTACCTCGGAGAACTCTTCTGGGA
0no label
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
744,250
ATCTGTTGCGGCGTTAGAATCACCCTTCCGCGCTTTCCAACCTTCAAGCACCAGCCCGGATACCTCAGTAACTAAGATTGACAAAACTAAAAAATCATCAATCTGTCCCACCACGGGAAGGAAATCTGGAGCAATATCAATTGGGCTGAC
0no label
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
1,678,560
GCAAGAAAACCCAACATCATCAATACTTTGTTGGGTTGCGCTATGCTTAACCAAACCTACCTTTTCCTTAACTGAATCCCTTAGGTTTGATCCTATCTTTCAGATATATGAATTTTTAGATTAATAGTTTCTTGCAAACTGCCTAAGTAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,306,300
AGCAGCGTTTCCCGTCAGGCACTTTGATAGGTCATTTTACTTTCAACAACTAAACAAAGTTTCCTGGGAAGACTGAGAGTCAAAAGAAACTACATTTGAAAGTGTGGCGTAAATAAGAAAACAAAAAAACAAAACTTGACTTGAGCAGTC
11
G000010425
ASM1042v1
GCF_000010425.1
PRJNA224116
SAMD00061080
null
2006/12/05
Gifu University, Life Science Research Center, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/425/GCF_000010425.1_ASM1042v1
639,633,010
RS_GCF_000010425.1
Monoisolate
Complete Genome
Full
representative genome
Major
367,928
1,680
Bifidobacterium adolescentis ATCC 15703
strain=ATCC 15703
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium adolescentis
true
Bifidobacterium adolescentis ATCC 15703
Eubacteria
Actinobacteria
1
1
1
1
2,089,645
1
59.18
2,089,645
1
1,683
614,966
86.722338
100
0
0
284
yes
yes
yes
20
high
721,760
TCGGCAATCCGCTGATCGAACTGACCGATTACTTCAAGAACACGCCGTTCCGCGTGTTCCAGGCCCCATACGTCGGCGCGGTGCTCTTCAAGGGTGGCGCGGCCACGCCTCGCCGTCAGTTCGACGCATGGCAGGATTGGGCCAAGCAGC
0no label
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
787,410
CTATCACACTGTATGGTGATGCGCTCGTCGTCGATGGGCTGAGCCTGTTCTTTATATTGATTTTCACTATTGTGACTACGATGGTTGCAGTTGCCTCGTATGATTATATTAGCGCTCAGCAATACAAGGCTGAATTCTACTCACTCATAT
0no label
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Xanthomonas oryzae pv. oryzae KACC 10331
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
2,825,550
CTGGAACGACAGCTTGCCGCCGGCCTGCAGATACAGCGGCTTGCTGGTCGACGCGCAGCCCTTGTCGCAACTGCGCGGCCACGCTTTCAGGCGATCCCAGTGGTTTTCGCCGGTGTTGTAGATGAACACCGGCGGCGTGTTCGCCTTCGG
0no label
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
5,958,550
AGGAGGCTCTGCACTCCATGGCGAACGCGTACACCAGGGTCATCGCGGAGCGCCCGGAGCAGCTGCTGATGCAGATGCAGACGTACGTCGCCTCGGCGGCCGCCGAGGAGGCCGGGGACCACGAACTCGCTGAGGCGGTGCGGGCGGGCT
0no label
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Streptococcus pyogenes M1 GAS SF370
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
1,534,650
ACCGCGGCGTCTTCTTAAACGAAGATGGTACAGTTAACACTAGCCAAGTGGAATTCTTCTCACCAGGTGCTAACCCATCTAACAAAGCAAAAGGTGGCTGGTTACAAAACCTTAACTCACTTGCTAAACTGGAATTCTCACATGCTAACG
0no label
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
4,419,740
CTGGACATGGTCACCGGCTCCCTCACGGCGGGTCACCCGCGTGAGCTGTGCGAGCAGGCCGCTTTCGCGCTCCTCGACTACATCGAGGAGTACACGGACGGCTTCCGCATCCTGGTCCGCGACTCGCCGATCCCCCAGTCGACGGGTTCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,539,550
TAAAACAACAGCTGCAGGTGAAGCTATTTCGCCGGCTGCATCACCGCAGCCACCCCCTCTTCTGTCGGGCACCGTGGGAGGGTGGGGGCGGGGAGAGCATCGGAGTGGTGAAAAGAGGTGCGATCAAAGCACAGCCGGGTTTCTGTTCCT
11
G000010065
ASM1006v1
GCF_000010065.1
PRJNA224116
SAMD00061073
null
2004/12/16
Nagoya University, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/065/GCF_000010065.1_ASM1006v1
637,000,307
RS_GCF_000010065.1
Monoisolate
Complete Genome
Full
representative genome
Major
269,084
32,046
Synechococcus elongatus PCC 6301
strain=PCC 6301
null
Bacteria
Cyanobacteria
null
Synechococcales
Synechococcaceae
Synechococcus
Synechococcus elongatus
true
Synechococcus elongatus PCC 6301
Eubacteria
Cyanobacteria
1
1
0.9
1
2,696,255
1
55.48
2,696,255
1
2,691
815,460
89.10092
99.73
0
0
342
yes
yes
yes
20
high
1,942,980
CACTGCGGAGTGCTATTCAGCCTAATGAGAGGTCGATCGCTAAAACTTAGCTTTCGCGTAGGACATAACCGACGCCGCGCACCGTTTGCACAAGCCGTTTTTCGCCTTCGATCTCAATCTTGAGGCGCAAGTAGCGAATGTAGACCTCAA
0no label
G000009545
ASM954v1
GCF_000009545.1
PRJNA224116
SAMEA3138207
null
2009/01/28
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/545/GCF_000009545.1_ASM954v1
643,348,578
RS_GCF_000009545.1
Monoisolate
Complete Genome
Full
representative genome
Major
218,495
1,349
Streptococcus uberis 0140J
strain=0140J
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus uberis
true
Streptococcus uberis 0140J
Eubacteria
Firmicutes
1
1
1
1
1,852,352
1
36.63
1,852,352
1
1,807
559,733
89.025412
100
0
0
291
yes
yes
yes
20
high
782,470
AAAAAAATACAAAGGTGTTTATTGTGATAAGAATGGTAAAATATTTTATCAAGCTGATCTTGGTGTTGACCCTGTAACAGGTAAACGAGTTCAAAAGAAAGCTAGAAAGAATCAGTATGGTAAGCCATTTAGTACAATGAAAGAAGCGTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,301,850
ATGCCGTGATTCATGTAATTTTTGAGTGGTTACTTTGGTGCAGTTTGTCAATTTGCTCTACCATACTGTTTTTTGATTATTTGTTTGTTTTCTAGTGTAAATAGCACAGCCCACATAAATGAGCGAAACTCATCATCTGAGGATCTTTGA
11
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Sulfolobus solfataricus P2
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
2,525,510
ATTTACCGAGTATTTAAAGACTATCGATATAATTGATAATGTTAAGATACATTCTATACAAATAAATAATGCATTAAAGGAAATTAATGATGAAGGTTGGAGGAGCCTTGATTCCCTCGAGGAGATTTACGCATGAGCTGCTCTTGGCGA
0no label
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
2,442,180
ACACCCGTGTGCTGCCGCAGCAGAGCAAGCCGGGCGAAGACGACGTGCTGCCAGAGATGGTGCAGGGTGAAGCACTCAAGCTGATCCAGATCGACCCGAGCCAGCACTTTACCAAGCCACCTGCACGCTTTACCGAAGCCAGCCTGGTCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,202,500
AGGTGGATCCAGAAGCCTCGGGTGGAGAGGCCAGTGTCGCTGCCTGGCCAGCCGAGAAGCCTGGGGACCTGGGGGACTCTAGTACAATCTTTTCCCTTGAATGGAGCAGATGTCACCATGTGACTCACCCTCTCGGGGGACTCCACCAAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,776,650
TTTACAAGGGGATGGGCGCATGAAACCATTTGAGACTGTTTCGAAACACCTGTGTTAGGACCCACCCTACACCTACTGGATCAGAATGTCTCTGTCTTGAGAAAGGGAGCAGGAGGCGAGGACCGCGTGTTTGTTCTGATGCCCTCCTTT
11
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
3,664,830
GGGCCGAACAGACGGCGGGGCGCCTGGTGCTCGAAGGCGCCTTCGTCCGATTGCCGGGCCACGAGGTCCGGTTGAGCGAAAAGGAGGAGGAACTCTATGCCCGAATTCTTCCACATCTGGAAGGCGAGGAGAGATTCCGTCCGCCTCGAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,942,600
TTCCTCTGGGAAGGAAAGAGGGGCTAGATATTGAGTCAGTAATCCATCAGGCCTATGGGATAAAGTCGACATGAAAACCCCTAAACTATGGGGTTTGGAGAATTTCCATATGACCAAACATGTGGGTGCGCCTGTAGGGTGCAGCTCTGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
163,050
CATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGACTGGAGAAAGTTCTCGGCCTGGAGAGGCTGCCGGGAGGTAGGAGCTGGGCCAAAAGATGTAAGCACATTTGCATTTATTAGGCACTTTATTTCCATTATTACACTGTAATATATA
11
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
1,442,220
GTCAGCGCATTGGGCAGCTTGAACAGCGGCGAGTCGCTCAGCGGTTCTTTCTCGTACACATCCAGGCCTGTGCCGCGAATGGTGCCCGCCTGCAGCGCCTCGATCAGCGCCGCCTCATCCACCACCGGCCCACGGGCAATGTTGATCAGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,239,750
GCAGGAGAGTCGCTTGAACCAGGGGGGTGGAGGCTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCAGGGCGGTAAGAGCAATGCTCCGTCTCAAAAACACAAAAAAACCCACACGTATTGGAAGGAAAACACTGCATTATCCTGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,568,000
TAATGCCTGCTTGGGGGTGTGCAGTACTGATACGACGTGGATCAGTGACATCTTTCTGATATGTTTTTCTGTTGGTGAATTAACAAACCGGGCACCTGGCGAGAGACTGTGCCCCAGCAGGATGTGACATCAAGATGCCAGGCTTAGGGC
11
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Microcystis aeruginosa NIES-843
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
328,120
GTCACCACCCGGGGGCCGTCCGCAACAACGTGGGCGTTGGTAATGATGATACCGTCGGGACTGACCAGAAAGCCGCTACCGTGGCCGCTGCCATTTTTGACGGTGACGACGGCGGGGCTGGCTTTCTGATAGACTCTAGAAGCGGTCTGC
0no label
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
442,000
GTTCTTCGTCACCGTGGGCATGCTGCTCGACCCGCGCGTGGTGATCGGGCACTGGGGGCTGGTGATCGGGCTGGTGATCGGGCCGGTGCTGTTCAAGTTCGCGCTGATCGCCTTGCTGGCGCGCGCCTTCGGCTCGGGCGGCGGCACGGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,889,050
TGTTTGTTCGTGTTGTTGCAGCTCTTGAAGACAACCAGTCCCTGATTGGGCTCTGCCCCAGTGAAACCCACGAGTGTCCTAGCAGGATGGTCACCTAGGATTTTGATGGTGCCACACACAGAGAACCCTGAGGACTGAGGCCATGGAGCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,787,250
TTGTCACATAAAATCTCCAAATATTCCTTGGGCCCCTCTTTGGGCACTGTGTAGAATGTTGGCTGAAGTAGGGAGGAAAAAGCCATAATCCCTGTCCTTGTGGGGTAGGAAGGTTGATCAGCAATATTGAAATAATTACCCAAATATGTC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
439,650
AAAATACAAAAAATTAGCCAAGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCTGGAGGCGGAGCTTGCAGTGAGCTGAGATGGCACCACTGCACTCCAGCCTGGGCGACAGCAAG
11
G000009905
ASM990v1
GCF_000009905.1
PRJNA224116
SAMD00061067
null
2004/09/02
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/905/GCF_000009905.1_ASM990v1
637,000,306
RS_GCF_000009905.1
Monoisolate
Complete Genome
Full
representative genome
Major
292,459
2,734
Symbiobacterium thermophilum IAM 14863
strain=IAM14863
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Symbiobacteriaceae
Symbiobacterium
Symbiobacterium thermophilum
true
Symbiobacterium thermophilum IAM 14863 IAM14863
Eubacteria
Firmicutes
1
1
1
1
3,566,135
1
68.67
3,566,135
1
3,297
1,051,001
86.832243
98.02
0.03
0
347
yes
yes
yes
20
high
361,010
GGGTAGTTCGAGAATCTCGCCGTGAAACCCCTTGATCAGGTAGCGGTCGGCGAGGTGCAGGAGCCCGACATAGGTGAAGAGCTCGTCCCGTTCCGGGCGAATATACCGCCCCAGTTCCCGAATCTCTTCCTCGCTGTAGGCCTCGATCAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,072,450
TATAGGGCGAGGAACTGGGTCAGGGTGGGGGAGCTGAGTCGGGGTGGGGGAGCTGAGTCGGGGGTGCAGAAGGGCTGAGTCGGGGTGGGGGAGCTGAGTCAGGGGTGCAGGTGTCTTGACTGTATCCTAGAGATGTTTTTTGCCAGCTTT
11
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
801,710
ATTCATTTAAAAAGATTGAGTTCTTATGACAATTCAATCTAAAACAAGAAAGCTGATACAGGACATTTACCCTGCCTCACTATCTATTAGTAGCGATTTTAACACATCGGGAGAAGACGGTAGCATTCCGACTTTTAAGCCAAATGGTTT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,560,400
ACCACGCCTGGCCAATTTTTTTGTATTTTTAGTAGAGATAGGGTTTCACCATATTAGCCAGGATGGTCTTGATCTGCTGACCTCATGACCCACCCGCCTCGGCCTTCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGACCGGCCTG
11
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
3,962,270
GGCGATCCAGACCGACTGCGGCGATTTCCTGCTGAAACTGGAAGCGCGCGAGAAGGAACGCACCGGCATCACCACGCTGAAGGTGGAGTTCAACCGCGTGCACGGCTTCTACATCGAGGTGTCCAAGGCGCAGTCGGACAAGGTGCCGGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,272,350
ATTCCAAACCCATATAGGACAGGCACTTGGATATCTGAGTGTTCTGCACTTAAAATTGGTCATGTCCCAAACTCTGTCCATCTCTCTCCCCAAATATGCTCTCTCTTTATGATTCTAACAGAACACTCTATGTCCAGTCATAGCCTAAGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
123,150
TAAAAGAAAATAGGTACATACAAAATATCACATAGAGAGAAATATTAATACCATGAAAATATTAAAATAAAAGCATAAAATTAATTCATTTATTTACCCTATTAGTATTTTTTGAACACCTATGTGCCAGGTATTGTGCTGAATGCCAGT
11
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
3,842,670
ACTTTGCCGCATCGTTGACACGCGCCCGGTTCTGAAGTCGCCTGTAAGCCCCCAGCTCGAGCAATTTGGTGACCGGGTCGCTTTCCAGCAAGGCGCTCCAGTTGTCACCCATGTATTCGCGAAAGGCGGATAGCTCGCCCTGATACTCTT
0no label
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Ames
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
425,880
TCTTGGACGACGCCGATAACAGCATTTAAAACTACAACAAGCGCAATAATACTTGCATCAGCCCATTCACCTACAAAGGCAGAAATAAGGGCAGCAATAATAAGGACATATACGAGGACGTCATTAATTTGGGCAAAAATACGCTGCCAT
0no label
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
5,962,060
TAAATTCTGTCTCAATCACATTCCATTCATGGGAATCTAGCAATGGCTCAAGGGAATTTTCCACCGATATATCTACGTCGTCAAGCATGAGTTAGAAAACCTAAAATTTGCAGATGGCTGTTGTCAAGATGAAACATAATCGATAGGATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,234,550
AAACTACCCTGTAGGAGCAGCCAATGCATTCTGACCTAACAGCTGTACACAGTTGCACTAGTTAAAATGAAAAGCTAGTCTGCATCACACACAGGCAATTCACTGAGCCTTACTGATACGTTGATGGGGTTTACCATCACAGTCTTCCCT
11
G000006985
ASM698v1
GCF_000006985.1
PRJNA57897
SAMN02604006
null
2002/07/02
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/985/GCF_000006985.1_ASM698v1
637,000,073
RS_GCF_000006985.1
Monoisolate
Complete Genome
Full
reference genome
Major
194,439
1,097
Chlorobium tepidum TLS
strain=TLS
null
Bacteria
Chlorobi
Chlorobia
Chlorobiales
Chlorobiaceae
Chlorobaculum
Chlorobaculum tepidum
true
Chlorobium tepidum TLS
Eubacteria
FCB
1
1
0.8
1
2,154,946
1
56.53
2,154,946
1
2,009
639,065
87.375415
98.9
0.55
0
334
yes
yes
yes
20
high
1,870,830
GGCCGCCGAGCAGAATCCCGGCGAGGCGTTCGGCAAAAGCGCGAAAGTCTATAGCCCATACGTGCTCTTGCGAACGCTTCAGGCGTGGAGCGGCGTGGAAGCGCTTTCGCTGCCGGGCGACATTCGCGACCTGCTCGAACGCACCTACGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,002,850
AGTGACATCTCTGTGAAGGGCCTGTGAGCATGCCCTCTGGAGTGAACACTCACCTCGCTCACAGCGGACGCCGGCTCTCCCCGGGGGGCAGAGGCAGGTGCCGGTCACAGGGTCGCAGGCCGCCCCCTGCCCACACCCACACACGTGGGT
11
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Ralstonia solanacearum GMI1000
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
3,807,440
GCATAGCCCGATCGCTCAAGGATCGACTCCACATCATCGAGCGGATCGAGGAGAAGAGAGCCCAGTTTCGATCGTTCACCGAGTCGCTCGACACGAGCCTGCCAGCAGGGCGAATGCTCCTCCACATGGTCGGAGCCTTTGCCGAGTTTG
0no label
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
2,763,670
CGGGGCCGGTCTTGCACCGGCCCGATCGGAGCAGCCTCCGACGGACCGGTCGCCTGCGCGGCTTTTTGGGGTTCTACCTGCACCGTACCACAGGCCGAAGCCCACTACTACTGCCTGTCGTACTCTTCGTCTTCGTAGTCGTCGCCGCGG
0no label
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Brevibacillus brevis NBRC 100599
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
3,123,250
TATCGAGGATATCTATACACTTTCTCCGCTCCAACAGGGGATGCTGTTCCACTCCCTGTATGCAAGCGACAGCGGGGATTACGTCGTCCAATTTGCGATTGATTTCAAAAACCTGAATGTGCCGGTGTTCGAGCAAGCATGGCAAAAAGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,660,200
GCCTTAACCCGCGGCCTGCCAGTATGGTGGCCCGCGTGGGCGACTGGCCTGGGCAGCTGCTGGGCGGGGCTGGAGGGTGGAAGGCCAGCAGGCGGGAGACACCCCCCACCCTCTTCCCTGCCAAGCTCAGGGAGAAAAGTGGACCCTGGT
11
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
4,108,390
GACTCCAGGCCGCGGTCCAGCATCGCGTGGTGCAGCGCCTCGGTGCGCGGGCGGTTGAAGCCCTGGTTGTAGTAGAGCTTCTGCGGCTGGAAGGCCGGACCGTACTCCGACTCCGGGTACTTCTCGGTGTCCGCCGCGCCGTCGAACGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,708,550
CCTGGGTGACAGAGCGAGACTGTCTCAAAAATAGAAAAAAAAAAAACTTTTTCCAAGAACAGAGTGGAAAAAGCTCATCGTCTTCTGCACATACCATACTCAATTTCCATTCCAGGACTAAATGAACTCCTCATCCAGGAACCCCCAAGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,081,250
TGTTAGTGAAATAAAATAAAAACATGGAGATAACACTTCTCACCTATCAGACTTGTAAAAATTTAAAAAGACAAAACATTCTATTAGGAAAACAGGCTGCTTCATACTTATCAGAAGGAACACAAATTGGTACATGCCAGCTGAAGGGAA
11
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Nitrosomonas europaea ATCC 19718
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
1,361,880
ATGATGCCCATGCCCACCTGCGTGCGCCACATTTTTGCCCAGACGGCCGGATCGTCATTGATGTTGCGCACAATCGGAGCCTGGGCGCGGATCACCACGCCTGCCGCACGGATGCGCCTGACCGCCTCACGCACAATGGGTGTATCCATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,894,800
ACACTTTGCTCCCTCATTCTGAGTTCCATCTCCAGGAGCAAAAAGCTCTAGAAGGGTCAACTGGGGCCAAGAAGGAACACGTATCTGGGGGTGGGAATGAGAGCCAGCCCTCTGCACCTGTGGGTTTGCATCCTCAGATTCAAGCAACCA
11
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Staphylococcus haemolyticus JCSC1435
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
2,159,040
AAATCACTTAACCTCACTTATTGAATTTCTTATTATAATTCCCTTTGTTGGGTTTAATGTTATGTTATTAAAAAAACTGAGAAAAGCTCGATGTGAGCGTATTCTCAGTTAAGTCATTTAATACGAGATGCCTATGATTCCTTAAATTAC
0no label
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
1,552,850
CTATGATTAAAAGCTAAGATTTTTACTGACCACACCTAGGAGAAACGATGCAAGATTCCATTCTGACGACCGTAGTGAAAGATATCGACGGTGAAGTGACCACGCTGGAGAAGTACGCCGGTAATGTGCTGTTAATTGTCAATGTCGCCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,994,900
GTACATGGGACAGAATGGGTTGTGACCAGCATCTCCCTAATCTGCCTTGCCCACCCACTCACTACTCTGCACTCACCTGGGCATTGTAAATGGTGTCCACCCAGCCACGGCACAAGGCCTGGCCACTGGCCTGGAACGTGTAGGCCCCTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,088,150
AGCTGAGCCTTGCCTGCTTCCTGCCTCTGGGTCGTCTCTGAAAGGGACTAAGGGACTAAAAAACTAAGAGGGACAGGGGGGCGTTTCCATTGTCTCCCAGCTCTGTCGTCTCCCTGCATCTCCTAACCACGCATGCCAGATCAGGGAGCA
11
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Synechocystis sp. PCC 6803 ASM972v1
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
1,269,580
ACCATAGAAATCCAAACTGGGACGACTGTAGGCAAAGGAAGTGTAAATTAGGGTATTAACTGGGGTGCTTTGTTTAATTAACCGCCCCACGGGCTTAACGGCAAAGGCTTCATTCACTTCCCAATTCCAGAGGGGACTGGAAAAAAGAAA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,823,450
ATATAAAATGATTATTTGTTAACACTGTTACCATCTGGAATGATCTCATTTATTGTTTACTATTGGTCTCTCCCACTGAAATGGAAATTCTCTAAGGCCCAGAGCCTGGTCCATGTTGTTTATCACTCTCCAGCATGCAGAACAGCACTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,678,050
CTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTATTAAAAATACAAAATATTAACTAGGAGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTTGGGAGGTTGAGG
11
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
2,650,310
CGCCGGTGACCAGCGCCGGGCCGGTGACGGAGACACGCCAGCCCCGGGGCGACGGCGGGAGGGACAGCTCCGTCGCCCCGGGGCGGGCGGCGGCACGGTAGGCGAGGCGGTAGGAGCGGGTGTCCGCGTCGTACGCCTCGGATCGGACGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,352,950
GGCAGGGAGGGAGGGAAGGGGGAGGGAGGGAAGGGGGGTAGGGAGGGAGGGAAGGGAGGTAGGGAGGGAGGGAAGGGGGGTAGGGAGGGAGGGAAGGGGGGTAGGGAGGGAGGGAAGGAGGGGAAGGAGGGGAGGAAGGGAGGGAAGGCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,260,450
CTTGCCTGGCCAGAAAATAATATCAAGATTCTTAAAAAGCAACCTTCCTCTTGCTTTTGTGTTTTAGTAAAGTAAAATCAGTTTGATCTGAAGTGAGGACTGAACTGCTGACTGGGTATTGACTGTCTTTTGAGTAGAGCTAAGCTTTCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,644,850
GGGTCCCGCCTGCAGAGTCCTCCCCCAGCCGTGGGCTCCGGCCTTAGGATTCCTGGACGTGTCAAGGGCAGATTCGAGGAGAAGGGCACAGCAGGCGTCTGCAGCCCCCATCCCACCCTCTTGCCAATGCCCTTGGGTAATCAGCCTCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
487,050
TTCCTAAATTAGTGTGTGGGTGACAGCACTGCAGAAGCTGAGCCTCAGGGAAGGGCGCGGTGGCTCACACCTGTCATCCCAGCACTTTGGGAGGCTGAGGCTGGAGGATCGCTTGAGGCCAAGAGTGGGAGATCAGCTTGGGCAACATAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,542,350
GGTGACACTGCAGTGACGCTATGGAGCATGGACACTAATACGTCCCACTGGACTTCTGCGTGAGCCCCAGACAGGAGCTTGACCAGCGTCAACTGGACCTGCTGCATCTGATCCTCTCCCAGAGTGAGGTTTTGAACAGAGATGGGCAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
751,800
ATGTGTGTGACCAGTAAGGCAGGCAGGGAGCAGATCCTGGGGCCTAGAAGCCCCCTGAGGATCAAGGATGGCACAGGCCCCTTGCCAAACGCTGCCGAGACCAAGCAAGGTGGCCCAAGCCCCACAGGCACAGACATGGGACCCTCAAGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,629,450
CTCTGGAGTGCCCTTGGCCAAGAAGAGGGGTCCATTCAGATGGCTGCAGAGGGGCCTTAGAATTTTATTTTTGGTTTACACTGCATGAGAGTGGCAACGAGAGACTGAAAATATGAAGGAAATCCAAAAAAGATGGAAGAGTGGAAGAGC
11
G000009065
ASM906v1
GCF_000009065.1
PRJNA57621
SAMEA1705942
null
2003/05/06
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1
637,000,351
RS_GCF_000009065.1
Monoisolate
Complete Genome
Full
reference genome
Major
214,092
632
Yersinia pestis CO92
strain=CO92
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia pestis
true
Yersinia pestis CO92 ASM906v1
Eubacteria
Proteobacteria
1
0.994
1
1
4,829,855
4
47.64
4,653,728
1
4,298
1,371,586
83.669593
99.82
0
0
372
yes
yes
yes
20
high
1,820,520
CGTGTTGCCTTGGAGCTGGTTAAAAACGGTGAAGCCGCAGCCTGTGTCAGTGCAGGGAATACCGGTGCGTTGATGGGGTTGGCGAAGATGATGATTAAGCCATTGGAAGGCATCGCGCGTCCGGCGTTAATGACGGTTATCCCCAATCAG
0no label
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Sodalis glossinidius str. 'morsitans' morsitans
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
2,735,460
CCGCAAATGATGAACATGCCGGCGGCCGACAAACCGTGGGCGATCATCTGTACCACCGCGCCCTGATAGGCCAGCTGGCTGCCGCTGTAGATGGCGATCAGCACAAAGCCCATATGGGACACGCTGGTATAGGCGATAAGGCGCTTGATA
0no label
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Methylococcus capsulatus str. Bath
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
1,940,770
CACCGGCATCCCGATCAACTTCGGCATGTCGGTCACCCTCGGATTCATCGTGGGCGCGGCCATTGCCGGCCAGACCTTCTACAACTTCACCCTGGAAAACATCCGCCAGTTCGGCGTGCTGAAAGCCATGGGGGCGGGCAACGGCACCCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,326,150
CACTCTCGATAGCTTTGACCTTTTTGACATTTTTCAAAAATTACATCAAACAACAACATAATATGTATACTTAACAAGTACATATGCAACATTCACCAATATAAGCCATGTATTGGGCCATAAAACAAGTTTCAATAAATTTAAAATATT
11
G000010205
ASM1020v1
GCF_000010205.1
PRJNA224116
SAMD00060919
null
2008/05/29
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
642,555,145
RS_GCF_000010205.1
Monoisolate
Complete Genome
Full
na
Major
334,380
784
Orientia tsutsugamushi str. Ikeda
strain=Ikeda
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Orientia
Orientia tsutsugamushi
true
Orientia tsutsugamushi str. Ikeda
Eubacteria
Proteobacteria
0.99
1
0.9
1
2,008,987
1
30.51
2,008,987
1
2,188
522,417
76.576503
99.51
0.49
0
186
yes
yes
yes
20
high
1,292,590
ATCGAACTAAGCAATCTATTAGGCAGGCATGTATTCTTCGATCAATTGGGTTTTTTGAGTATGAAGTTTAAAATACAAGCTGTGCCAGCCATAATAGAACAACAAAATAAGGTGCTTAAAATTAGCGAAATAAGCACCTATTAACCATGT
0no label
G000007105
ASM710v1
GCF_000007105.1
PRJNA224116
SAMN02603579
null
2010/01/12
Macrogen Inc.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1
637,000,356
RS_GCF_000007105.1
Monoisolate
Complete Genome
Full
na
Major
264,203
542
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
strain=ZM4
null
Bacteria
Proteobacteria
Alphaproteobacteria
Sphingomonadales
Sphingomonadaceae
Zymomonas
Zymomonas mobilis
true
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 ZM4
Eubacteria
Proteobacteria
1
1
0.9
1
2,056,363
1
46.33
2,056,363
1
1,753
604,103
86.562441
100
0
0
320
yes
yes
yes
20
high
1,094,600
CTTTATTTGCGTCTTCTGATGAAGAAAACTTCCATAATCGATCCGAAGAAAAACCAGCCAGTCGCCATAGTTATAGCAGCAGACAGGGTTTGGCAGCTGCAGATAACACCGATTATAATGAAGGACGTAAAGCGGCTCATACGGTTTCTT
0no label
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Bacillus cereus ATCC 14579
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
1,941,420
ATGGTGATGAAACGTTGGATTTGAAGTTTTTCCCGTTAGACGACATGCCACCGTTATTTTGTAAACAACATGAAGATTGCCTGCAAGATTTATTGGAGAAAAGAGTAGGGGTATATCGTTAACATATAAAAAAGAAGCTAAATGAAGATT
0no label
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Gemmatimonas aurantiaca T-27
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
35,100
GCGTCGTTCAATTCGAGACGCACCACATCGTCCTTGATACCGAGGTGGATCACGCGGCCCTGAAATGCACCGCTCTGCACTTCCCGTCCAATCAACATGAACGCCTTCGGCAAGTCGATCACCACGCTGCCGAGGATCACGTCAGGGGCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,588,950
GTTTGCCACAGAAATAATCAAATTTCCTGATCAGTTGCATGATTATTATACGAGCTCTCATCAGACTTTAAACTATGGTAGTTTTAAGTTTCTGTCATTCATAGACAGATATTATTTTACTTTACTTTTTCTCTAGAAGTGTTTGCAGTT
11
G000008925
ASM892v1
GCF_000008925.1
PRJNA58233
SAMN02604111
null
2006/03/30
University College Cork
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/925/GCF_000008925.1_ASM892v1
637,000,143
RS_GCF_000008925.1
Monoisolate
Complete Genome
Full
reference genome
Major
362,948
1,624
Lactobacillus salivarius UCC118
strain=UCC118
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Lactobacillus
Lactobacillus salivarius
true
Lactobacillus salivarius UCC118
Eubacteria
Firmicutes
1
0.986
1
1
2,133,977
4
33.04
1,827,111
1
2,106
630,045
86.976336
99.48
0.52
0
292
yes
yes
yes
20
high
1,741,870
TGGCTGGTGGTGGAAATGGTAAAAGTACATTTTTTAATTGGCTATCGGATGCCGTAGGAATTGACAACATTAGTAACGTATCTTTACAGGATTTGACAGACAATCAACGGCGATTTACTACATCGCGATTGTATCAAAAGAATATGAATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,641,550
GTTCTGTCCTGTAGACTATGAACTAGAGTGACGTGTCACTTTTAGATGAAGGCAGTTGAGCCAATGTTCCTCCTCCGTCCCTCTCTTCTCTTGCTCCAGTGACCTTGGAGGCTGTGTATTGCAGATGGCATAGATTAAAGATGGAGTAAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,550,100
AGTCTTGATCTGATTGTGAAAAATAAAGACACCTCCAAACAGGGATATTTCTGACTAACAGCTGGGGTAGAATCATCGGCTTATTACCTTTTTAAGCTAGCCACCTTCTCTTTGCCCCTAATATGTATGGTCTTTGTGTTTTTTTTTTCT
11
G000009725
ASM972v1
GCF_000009725.1
PRJNA224116
SAMD00061113
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/725/GCF_000009725.1_ASM972v1
2,514,885,032
RS_GCF_000009725.1
Monoisolate
Complete Genome
Full
representative genome
Major
1,148
1,148
Synechocystis sp. PCC 6803
strain=PCC 6803
null
Bacteria
Cyanobacteria
null
Synechococcales
Merismopediaceae
Synechocystis
Synechocystis sp. PCC 6803
true
Synechocystis sp. PCC 6803 ASM972v1
Eubacteria
Cyanobacteria
1
0.99
0.9
1
3,947,019
5
47.37
3,573,470
1
3,713
1,164,101
86.890968
99.78
0
0
349
yes
yes
yes
20
high
2,786,940
TCATCAGATTCCTGTGATGAAACAAGATCTCGATAATCACGGCTTTTGGGAAACAGCAAAAATATGGATTAATCATGACAGAAGTATCCAGCGATTTCGTCCTTATTTTCAGCTGCAAGTGGTGACCATCACCCAACTCCTGGGAGTTAA
0no label
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Mycobacterium avium subsp. paratuberculosis K-10
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
1,258,790
ACGACACGCTGGACAACGATGCGACCGTCTGGCAGAACATCCGCCACGCCGCACCGGATTCCGGCGAGCAGGACCTGCGCGGCCTGCTGGGGGCGTTCATGTTCAGCGGGCCCCAACTCGACCAACCGGCCGGCACGCTGTCCGGCGGCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,551,600
GAAAGTAGAAGGTGAGAGATCTCATAGAACCTCTAAGTTTTAGTCTCAGGCTTACAGAGACCCAGCACAATCCGAGCCAGGCATTGGAAGATCCTCCTGGCTCTCACATAACCCCTATGCACCCTTTAAGACCCAATTCCAAGGACCCTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,395,500
GCCTTGGCTCACCTCCGGTGCCACACAGGGACAACCTCTCTTGTCTCAATGAGACCCTTATCAATAGTACAACCCCTGGGTTTGCCAATGTCTGTCCCTTTCAGGTGTGAGGAGGTTAAAAACTTGTTCAGGGTAACCAGGTAGCAACGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,118,350
CCTCGGACTCTCAGGTACCTTCCTGTAGACAAGGAGACAATGAACAATGTCACTCAAAGCCCCAAAGGCAGCAGCTCACAGAAGTGAGAGCTCCTTCCCCTCCAGGTCACGTGCTGTGAAACTCATGGCCCTAAGGGGAGGCTGAGAACA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,395,550
TAACAGATGCCGACTTTTCCTGAGTGCTGCTTGCCCAGCTTGCTAATCAGAAGGGGGCTGGCAAGAGTCTGTGAAAGGGGAGTTGTCAGCAGAAGATGCCTTAGTGGCAGTGATGGTGGCAGCCCGCTCACTCCTCTCCCTGCCTGCCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,897,850
TTGGAACAAGGACTTAACTTCAGATCCAGTCTGTTTGGCATCATTATTTTTTTAAAGCCATTTACAGCAGACATTTATTGGCGCTAGTAAACTCAGCTGTTGTTAAGAGGGTTCCCCACCCTCTCAGATCCTTAAACCAAAGGGAAAATT
11
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
493,740
GGTTGTGGAGAGATTGATGGCTGAACTGGGTCTGCGCTCCGTTGTTCGACCAAAAAAATACCGTTCCTATAAGGGCACCGTCGGAAAAATTGCACCGAATTTGCTGGAGCGCAATTTCACGGCGCAACGCCCGAACCAGAAATGGGTGAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,374,350
CAGGAGAATCGCTTGTACCTGGGAGGTCAAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTGTGTCAAAAACAAAAAAACAAAACACACACACACAAAAATGAGAAAACAACAACTGAGGTCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,887,950
TTCCTGGGCACCAAGCTGGAGGGGGTGTCCAGACAGATGGGAGGGTGGTACTCTGCACCCCCGCTCCATGCAGCTCTGACCTCGAGAGCCGCCTCAGCCCGCCCGGCCCCTCGAGAGCCGCCTCGGCCCTCCCAGCCTTCCTACAGCTCA
11
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Streptococcus pyogenes M1 GAS SF370
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
1,227,980
TTCTTCCATAGCAATACCTGATGATTCCAGACACGCAACCAGTTCTGGGGTAGCATCTACCGAAAAGAACCCCTCAATTTCTGCTTTATTAGCTCCACGACGAATCACTTCTGTACTAGCACGCGCACCAAGCATCATATTCATAGCATC
0no label
G000007645
ASM764v1
GCF_000007645.1
PRJNA57861
SAMN02603126
null
2002/12/20
Chinese National HGC, Shanghai
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
637,000,281
RS_GCF_000007645.1
Monoisolate
Complete Genome
Full
reference genome
Major
176,280
1,282
Staphylococcus epidermidis ATCC 12228
strain=ATCC 12228
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus epidermidis
true
Staphylococcus epidermidis ATCC 12228 ASM764v1
Eubacteria
Firmicutes
1
0.977
0.9
1
2,564,615
7
32.05
2,499,279
1
2,354
721,937
82.93198
99.81
0
0
345
yes
yes
yes
20
high
1,006,330
TCAAGAACTTATCAATCAACTGAAACATAAATACGAAATTGAATTAATAAAAAATAGATATGAAATAAAAACAACTGATGTGAGTGATGTTTTACAATTATTGAAACAATATCATGTCAATTTCAATAAGATTGAAATTCTTAAAAAATC
0no label
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Macrococcus caseolyticus JCSC5402
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
2,072,980
TCGAAAAAGCATCCCCAATCATTGATTGAGGATGCTTGTTCATGATTTCTCTAGATTTCCGTTCTTCCTGTTATTGCTTTGGATAACGTCACTTCATCTGCATACTCTAAATCTCCACCTACAGGTAAACCGTGCGCTAGACGTGTCACT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,252,000
AAACTTTAGATGATACAAAAGTTGATTTAGGCAAATGAGAAACTGTTTTGTTTGGTTTTGTTTTTGAGAGAATCTTGCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAAACTCTGCCTCCCAGGTTCAAGCAATT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,424,600
GATCTCAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCACCACGCCCGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTCCTCCATGTTGGTCAGGCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,727,150
ATAACCAGAGTGGGACCAGCACAGGGGTGCAGCCTCCTGTCTCATCGCCCACCTTGTCCACTGCCTTTTTCAACTTTAAACACCGTGAGCAGATGAACGAGGAAGACAGTTTTCCAACCCCATCTGAGGCGTCTCCTCCTTTTACAAATA
11
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Neisseria gonorrhoeae FA 1090
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
1,518,920
CATGACATGCCCCAAGCCGAAATCAAAATCACAAGGGTAAAAGAGACACTTTGCCCCACAATTCCCCACCAATCGACACTATAAGAAATTTTAAACACTCGGTCAAATCAGGGCATGAAAACTCATTAACATATCTGAAATTTTTATTCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,627,700
CCCTTTGCCAGCCTGGGGCTGTGCCTGGGGAAAGGGGTCGGCCCCCTCTTAGCTGGGCCTGGGCCGGTGGAGTCTGCTCCCTCCACACCCCTGAACTCAGACCCCACGGGCCAGTGGGGACCCTCCCTTCCTCTCCAGGGGTGCTTGGGC
11