#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
296,850
1
ATCACAGCAAAATAGATTCCTAAAAAATCCCTGGCCTAAGATGATACCCTTGGCTGGATAAGTTTGAATGTGCTCATAGTGGACATGGTAGAATGAAGGTGGTTGAAATGTTCACATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAG
120homo sapiens
G000007465
ASM746v2
GCF_000007465.2
PRJNA57947
SAMN02604090
null
2011/09/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/465/GCF_000007465.2_ASM746v2
637,000,288
RS_GCF_000007465.2
Monoisolate
Complete Genome
Full
reference genome
Major
210,007
1,309
Streptococcus mutans UA159
strain=UA159
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus mutans
true
Eubacteria
Firmicutes
1
1
0.9
1
2,032,925
1
36.83
2,032,925
1
1,897
591,301
85.692487
100
0
0
308
yes
yes
yes
20
high
79,690
0
GAAGTCAACTGGATGAACACCTGGGAAGATTATTGTAATCTTGTAGCAGATACAGTTGGACAGGACTTTAACGGTACGTTTAATTTAAACCTTGATCTTGGCCTTATCAATGAAAACGGTCAGTACATCTTGACGCAAACGCCTGTTAAG
92Streptococcus mutans UA159
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,901,050
1
AAAGCCCTCCAAGCTTTGTTCCTTAGGCGACACTAGGGCTCTGGGTGGGGTTGCTCACCCCTCATCACATGCCATCTGTCTGTTCTCATGCTGAATGAGGATGGGATGGCATATCATCCTGGTGGAGATGAGAGTGATGACCCCACCAAG
120homo sapiens
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
487,890
0
GCAGATGACGTTTTGGGTCCTGACGGCGTTGACCGTGGCGGTGGTGTCATGATCGATGATCTTGGTGTGAAGGCTTCGGTAGCGAGACCTGTCCAGCGGGTGGTGAGCTTAGTGCCGTCGATTACCGAAGCTATCGCGATGACTTGTCCA
77Propionibacterium acnes KPA171202
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
106,200
1
TACTGGCAAACCAAATCCAGCAGCACATCAAAAGCTTGTCCACCACAATCAAGTCGGCTTCATCCCTGGGATACAAGGCTAGTTCAACATACGCAAATCAATAAACATAATTCATCATATAAATAGAACCAATGGCAAAAACCACATGCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,335,750
1
GTCCATTTTTTAATACTTCTTTTCCTGCCAGCACAGCTGACACCAGCTTGTTTGCTTGCTGTTGCCCATCCACGTAACAGCATCATGTGGAATGGAACGAGACCAGCCCGGCCCACAACTTCTTGTAGGCTACAGTACCCCTACCCCTAG
120homo sapiens
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
1,599,520
0
GTTCGGGGGCGATGGCAACAACAGGATTTACTATAAATAGAATTAAAACAAAAAATTTACTTGGCTTTGACGATATTATACATAATTCAATGGATGGTGTTTCTTCAAGGGACTTTATAGCTGAGACAATGTTTGATATTTCAATGCTAG
59Methanococcus voltae A3
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,344,500
1
GTGTTAGAATAAGCTATCAAAATCAACAATAGCCGCCAGGCGCAGTGGCTCACGCCTAGAATCCACTTGTGTGGATATACTTCCCCAGCATAGCCAGGTCCTGCCAGAGAACATTTCCAGTGCCTCCCCAGGCAGTTCACACAGACAGAC
120homo sapiens
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
521,170
0
GAAAAATAGGTATATCACTCTGTTGAGATAGATGGATCAGCCTGCTCTTTCTTCGGGATGATTTCAAAAAACTGTTGCTGCATATCATCGAGTAACGGTGTTAACAAAGCAACTTCTTCATATTGTTCATGTTCATTTAATACACGGATA
6Bacillus anthracis str. Sterne ASM816v1
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,723,020
0
GACGCCATGGCCTCGCCTTCACGCGCTACGGCCGCATCAATCTGCGCAACGCCCGACATGCGGAAGACACGCGCCCGCTCGACGAACAGTCTTCCTGTCCGGCGACTCGCGACTATTCGCGCGCCTATCTGCACCACCTGATTCGTTCAA
86Sinorhizobium meliloti 1021
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
4,154,670
0
AATTGAGCGCATACACCATGAACAGCCCGGTCATGAATGCCATCCAGATCATGACCGTGCTGTATCCACGGCCTTCCAGGAAAAGGCTTCGTACCGGCTTGTCTTGAGCAGAGATAATCTGCGGATTGCCAACGAATTGCGTGTCATCCT
78Pseudomonas putida KT2440
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
232,050
0
CGGACAGTTGTAGTCGGTAAACACAATGATTTTATGTGGCGCGTCTTGGTCACCTAAAATTGGATGTGCCGCCGACTGATACAGCCATTCCTGATGGTTAGCAAAGGCGTTTTTCTGCTCACTTTGCTGTTCTAAAAAGCGCTGTAAGCC
50Idiomarina loihiensis L2TR
G000008885
ASM888v1
GCF_000008885.1
PRJNA224116
SAMD00061100
null
2004/05/11
Yale Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/885/GCF_000008885.1_ASM888v1
637,000,338
RS_GCF_000008885.1
Monoisolate
Complete Genome
Full
representative genome
Major
36,870
51,229
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Erwiniaceae
Wigglesworthia
Wigglesworthia glossinidia
true
Eubacteria
Proteobacteria
0.99
0.986
1
1
703,004
2
22.48
697,724
1
646
209,912
87.974606
100
0
0
207
yes
yes
yes
20
high
304,200
0
CGAATTCCTCGCTCCTTTATTTTTTCTATAATATGATTAGCTCCAATCGAACCAAAAAGTTTACCTTTTGATCCTGCTTTACAATAAATTTCTATTTCTTTTAAAGATTTTATATTTCTAAATCTTTCTTTTAACTTAAAGTTTTCATAT
109Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,366,150
1
CAGGGGTGCAGCCCCAGCCTGCGTGCGCCGCTGAGCAGGGCGGACTGACCCTTCGGCCCGTCTGCACGTTCCCCCAAATCAGCGCAGCCACCACCATGGGCTGCAGTGGGGGCAGCCCAGGCTCAGGAGCCCCGCCCGGGACGGAGCCTG
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
2,480,270
0
AATTTGTTTCATTCACCTTATATAGAGCTTTAGGTTCCTGCTCAGAAATGTTATCTTCAGTTTGCTGATCTTTGCTTGTAGACTCATCTTCTCCTGACTCACCTTCTCCTGAATCGAATTCTTTGGAATCAGAATTTCCTTGCTCTTTTT
9Bacillus pseudofirmus OF4
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,852,000
1
ACTGTAAAATGAAGTTTTGAATCTTCTTGTTAATAAACTGTGGATTTCCCCTCTCAATTTCTTAAACAACAACAAAAAAATGCTTGAAGATTGTCTTTGAGTGTAAGATCTGCCTTTTCAGAAAGGGAGTGTTAGTTTGTAATGTTAAAA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,232,550
1
AACCTCCTGGGTTCAAGCAATCCTCTCACCTCAGCCTCCCAAATAGCTAGGACTACAGACACACACCACCACACCCCGCCAATTTTTTTTAAAAAAAATTGTAGAGAGGAGATCTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGGG
120homo sapiens
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
4,283,240
0
ATCTTTTTGCAAGGTATCGATTTTCTGATTGACATCTTTTTGCAGGGTATCGATTTTCTGGTTGACTTCTTTGATGCTGTCTTTAATTTCCTTAAGGACTGATTCTAGGGAATAGGTGACAGTTTCGTTAGACATTTGCTAGACTCCTAT
64Microcystis aeruginosa NIES-843
G000010325
ASM1032v1
GCF_000010325.1
PRJNA224116
SAMD00060914
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/325/GCF_000010325.1_ASM1032v1
640,753,037
RS_GCF_000010325.1
Monoisolate
Complete Genome
Full
representative genome
Major
387,092
387,092
Nitratiruptor sp. SB155-2
strain=SB155-2
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Nitratiruptor
Nitratiruptor sp. SB155-2
true
Eubacteria
Proteobacteria
1
1
1
1
1,877,931
1
39.69
1,877,931
1
1,933
610,396
95.761026
98.78
0
0
319
yes
yes
yes
20
high
1,334,580
0
TGCTCTTCTAAATGGATGGCTATATGTGATGCTTCTATAGCTTGATAAATATAGAATTTGGTTATCTCGATAGCTCTGTACATAATGTCTGCATCAATATAGTTGTGTTCCTTTTGTTCATTAATGGCTTCTATCGTGTGCAAGAGAATC
68Nitratiruptor sp. SB155-2 ASM1032v1
G000007625
ASM762v1
GCF_000007625.1
PRJNA224116
SAMN02603289
null
2003/02/05
Gottingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/625/GCF_000007625.1_ASM762v1
637,000,080
RS_GCF_000007625.1
Monoisolate
Complete Genome
Full
representative genome
Major
212,717
1,513
Clostridium tetani E88
strain=Massachusetts substr. E88
null
Bacteria
Firmicutes
Clostridia
Clostridiales
Clostridiaceae
Clostridium
Clostridium tetani
true
Eubacteria
Firmicutes
1
0.997
1
1
2,873,333
2
28.64
2,799,251
1
2,799
856,294
87.797934
98.28
0.14
0
315
yes
yes
yes
20
high
743,600
0
GAAAGACCATAAAGAGTTAGAAAAATTATATCCGAAAGAATGGAACGCTTGGTGTGAGGATTGGAAGGAATGTTCACCGCCTAAGGGGGAAAGTTATAAAACATTTTATTATAGAGTAAAAGAATTTATAGAAGATGTTTTGAAAGAAGA
30Clostridium tetani E88 Massachusetts substr. E88
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,350,300
1
TTTAATTGCACATCCCTTTATTCTGTTTCAGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTGAAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCATCCTATCAACAGATCAACTGT
120homo sapiens
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
1,824,680
0
GGGCGACAAGGTCAGCGTCAAGCCGGGCTACGGCCGCAACTTCCTCGTGCCGCAGGGCAAGGCCGTGCCGGCCACCGCTGCGAACGTTGAAGCGTTCGAAACCAAGCGCGCCGAGTACGAAGCCAAGGCCAACACCATCCTGGCCGATGC
112Xanthomonas campestris pv. campestris str. ATCC 33913
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
2,721,940
0
CGCGACAACGGCAAGAGGCGCAAGCCAAACGCCGCATAGGTCTGGGCTTCACCGGCCTGGGGGATGCGCTCGCCATGCTGGGCCTGCGCTACGACAGCGCCGCAGCCCGCGACATGGCGGCCGGCATCGCCCGGCGGCTGCGCGATGCCG
63Methylococcus capsulatus str. Bath
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,769,200
1
GAGAATGAGAGAGGAGGAGGGGGCCACCAGACTCACTTTTATTAAAAAAAAGCCACTCCTGTAATAACTAACTCACTCCCAAGGTAATGACGTTAATCCATTCATGACCTAATCACCTCTTATTAGGCCTGACCTCCCAACAGTGTTGTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,656,700
1
GGCAGTTGCATGAGCCAGCGCCATCTAAGCCTGCTGAGTTCACAGGCACGCTCACATGCTGGCTGGGGGTGCTGCATCAGACTGAGGCCTGGCAGCTGGCAAGGACCTATTGACATCAAACATAAGATGCTTTTCGGCCGGACGCAGTGG
120homo sapiens
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
1,717,560
0
CCTCCACTGCGGTGTTTTGGGCGTCAAAGCCTCCACACCCAAAGATATTTTAGTGGAGTAATTCACATTTAAGAATACTCTAATCCGCATTTTTTCGGCTGATTTTAGGTGCCGGGTTAGGCTCTGAGCCAACCGGTCCGCCCTCCTTGT
84Rothia mucilaginosa DY-18
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,444,900
1
AGGAAGCCAGAGGGTTTGCAGTGTGGGGAATGAGCCTGTTCATGACACTGGAGGAAGCCAGAGGGTTTGCAGTGTGGGGAATGAGGGTGTGGCTGGTGCAGGATGAGGGTGGAGTTGTGTGCAGGTGGGCGGGATGCAGGGCCTGGTAAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,296,850
1
AATTAAAAAAAAAAAACAGCAACAACAAATAAGAACTAAACTTGCCAGCACCTTGATCTTAGACTATCAGCCTCCAGGGCTGTGAGAAAATAAATTCATGTTGTTGAAGCTCCCTAGTCTGTGATATTTTGTCATGGCAGCCAGTGCAAA
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
5,293,860
0
GGACGCGGTCCGCAAGCGACCCGGTATGTACATCGGCTCGACCGGTGAGCGCGGACTTCACCACCTTGTGTACGAGGTCGTGGACAACTCCGTCGACGAGGCGCTGGCCGGCCACGCGGACACGATCGACATCACGATCCTCGCCGACGG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,758,500
1
CTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATCGGCAAGGACTTCATGTCTAAAACA
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
1,384,500
0
GAGGCGATTTTGGCCGTGGCGCAGGAGTACGGGCTGCCTGAAGGGCTTATCCGCCGGCGCATGGCCGGCCGGCTTTACAGCGTGCCGCCCAGCCCGTCGCTCTATTTTCTTTTTCACATGGCCGAGATCGAGGCGGACATGCACATCGAG
36Desulfovibrio magneticus RS-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,538,350
1
TGATGCATCTGCACTGCCAGGGCTGCCAGGCCTGTTTTGCTGCCAGGTGCCCTGTGTTGCCGTAGCCCTTGAAGAAGGACCACCGCAGCCTCAGAAAGGGGCAAGCATCACACTGCGGCATCACGGACACCTGCAGCTCCAGGAAGCTCG
120homo sapiens
G000007325
ASM732v1
GCF_000007325.1
PRJNA57885
SAMN02603417
null
2002/04/09
Integrated Genomics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/325/GCF_000007325.1_ASM732v1
637,000,117
RS_GCF_000007325.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,304
851
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
strain=ATCC 25586
null
Bacteria
Fusobacteria
Fusobacteriia
Fusobacteriales
Fusobacteriaceae
Fusobacterium
Fusobacterium nucleatum
true
Eubacteria
Bacteria
1
1
1
1
2,174,500
1
27.15
2,174,500
1
2,022
670,780
90.88917
99.95
0
0
297
yes
yes
yes
20
high
2,135,380
0
AAATCTTTCAATTTCTTCAACTGGTCTATATGACTTTGGAGTTTTTATTCCAACACTTTGTGCAATTTGTTTAGTTTTATCTTTATCCATAGTTATTGCACTAGCAAGAACTCCTGAACCAGTATATTTTTTACCCAAAATATCTAGTAC
41Fusobacterium nucleatum subsp. nucleatum ATCC 25586
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,084,350
1
AGCTACTAAGCGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTACAGCCTGGGCAAAAAAAAAAAAAAAACCCACGTGAAACTGAAATTAAGGCCGGGCGCGGTGGCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,433,800
1
ATTTCTGTCAGGAAGGGACCACTTCCAGACCTAGTAATTCCAGGGATGGAGCCTGGCCCAGAGGTTCTGGAGAGCATGGGTCACCTCCAGAGAGTGCGGGTCACCTCCAGAGAGTGCGATCAGACTGGAAATTTTGACCTATGGAAGCTC
120homo sapiens
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
134,810
0
AGCCAATGATGCGCGTGCAAAGCGATTAAAAGCACTTTATCAAACATATACCGATTTAGATGCGCGTGAACAACTTGCGTTAACGTCAATAAAAGCCGATTTAGATAAAATTAATGCTATTCATACGTTTGCAGATTTAACGCGCTATTT
44Haemophilus ducreyi 35000HP
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
3,841,760
0
TCGGCCTTTACCTGACGGTATTCAGCTTCCGTAGCGTCCAGTTGTACCTGATAGTCAGTCGGATCCAATTCGGCCAGGAGCTGCCCCGCTCGTACTTGCGCCCCGTCTTTCACGTATATTTTATTGATAGTGCCACTTACCCGAAAAGAA
10Bacteroides fragilis YCH46
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,229,750
1
CAGGCCTGGGAATGGTCCAACGTGCTCTCTGGGGGAGATGAAACACAGCTGGTATTACAGGTCGAAACGTATCCCCCGATCTCCACATGCTGCAGTCTAACCCCCAGGACCTCAGAATGTGATCTTACTTGGAAATGGTGGCATTGTAGA
120homo sapiens
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
4,192,760
0
GGCAAATGAAGGTCTTCTCCCTGGAATTCAAATGAAAGTTTTTTCTCCCCGGAATTTATATCCTATCCTTCCAATCCCTGTATCATGTACGAAGCAGGCATTGAAATGACCAACGAGGACTTTGAATTTGCAAAGCTTCCTCTTTCAAAA
61Methanosarcina acetivorans C2A
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,718,100
1
ACCCTGCACCACATGAGCCACCTGCAGAGAAGGAGCCCTGGTGGCCTGGGCTTGAGAGAGCAAGGGAGAGCCTGCACCATGGATGTGCTATGTCAGTTCATGCTGCAGGAAGGCACTGACCCTCCCCACACAGTCAAAGACTTGGTTAAT
120homo sapiens
G000007325
ASM732v1
GCF_000007325.1
PRJNA57885
SAMN02603417
null
2002/04/09
Integrated Genomics
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/325/GCF_000007325.1_ASM732v1
637,000,117
RS_GCF_000007325.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,304
851
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
strain=ATCC 25586
null
Bacteria
Fusobacteria
Fusobacteriia
Fusobacteriales
Fusobacteriaceae
Fusobacterium
Fusobacterium nucleatum
true
Eubacteria
Bacteria
1
1
1
1
2,174,500
1
27.15
2,174,500
1
2,022
670,780
90.88917
99.95
0
0
297
yes
yes
yes
20
high
1,115,010
0
CAGCTGCATCAGGAACTTCTGTTACATATGAAGCATTTAATAGAAAAGAGGGAATAATCCAAGAAATGACATTATCTATTAAATCGTTATTAAATGCAGAAGGAATTAGATATATATTTTCTTCTATGGTTAAAAACTTTACTGGATTTG
41Fusobacterium nucleatum subsp. nucleatum ATCC 25586
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,499,300
1
TCCCCCCTCCAGTAGTTGTTAGGCTGCCATTTGTCACAGCTATCATGATTGTCAGACTGTTGATTTTCAAGGCCACTACACAGCTGGGGAGAGAGAGATGAAATAGGTCAAGTTGAAACGTCACACAGCTGTCTATTCTTACCTAGATTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,790,950
1
GTCTGTACTCAGATTCATTTTCTCTTACTCTGCTGGAGGACTGAAGCCAAACTGATATAATGACTCATAATAAATAATTTATGACGGTGGTGGAAATACAGATGTTATTCTTCCAAAGTATGCAGATACAGAAAAGTTTTTAAGTCTCAG
120homo sapiens
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
530,140
0
GTCGGCCGGGGACAGTCGGCCGGTGAACAGCACGTCCTGCGCCCCGGCGGTCTCCACCACCGCGCCGAGCAGGGCGTGGCCGGAGGAGTCCAGGCCCGCCGAGGAGACGTCGACCGCGGTCGTGCCTTTGAGCCAGTAGCGCTCGCGCTG
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,977,300
1
CGGACGTGTGGACAAAGGGAGGCTGTAGCATGAAGGCGGCCAGCGAGGCACGCGCGATGCCCTTTGTCACCAGGGAAGGCCGCCAGGAGCGCGGAGTGTGGGAACCGCCGGCTCTCGTCTTTAGGGGTGCTCTGTGGGGGTGGCGCACCA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,985,450
1
TGTGCTCCAGTAACCCCATTCTGCCCCCAATCTAGCCCCTCTGTCTTCAGCAACCGAGCCCCAGCCCTCAGTAACCCACCCCTTGCATGGGTGACCTGGCCTCTGCCTGGTGCCTGGCCCCACCCTTTCTGCCAGCCTGGGTATCTGGCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,631,800
1
CTAATTAATTCAGTTCACCAGTGTTGGGCGATGCTGCCCTTCTGATGCTGGGGGTTGACCGTGCTCTGTTTGGGGAATGGGTGTCATCTTCTCCCTGGGTTATGAGCGAGCCCTTTTATTCCTGAGCTGCGTGACACCGAACTGTCACCT
120homo sapiens
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
2,488,200
0
CGTGGTCGAGCACACCTGCCGCCGTCTGGGGGTGATCCTGGATTCCTATACCGTCTACCTCGACCTCTGGGTGGCCGACGCCCAGGGCCGCGTCGTCGCCAGCGGCCGGGGCGGGCGCTATCCCGGCGTGGTGGGCACCGACGTGTCGGG
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,512,900
1
GAAATGCTTCATATTTTGACGATATCGATGCCAATATCGTAGTTATAATATGGTGCTGTAATCTTGCTGTATGTTACAGCTGGTGAAAACATGGGATGTCTTTGTATTAATTCTTTCTTTAAAATTTTATTTTACTTTTTTTGTGAGACA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,279,100
1
GGAGTGCAGTGGCAGGATCTCAGCTCACTGCAACTCCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCGTGCCACCACGCCTGGCTAACTTTTTGTATTTTTAGTAGAGACCAGATTTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,311,350
1
GGTGTGTGGGGGGCCATCCACAGAGGGGGCTGTGTGGTGGCAGTTTCAGGCTCAGGCTGAAATAGGAACTGAGAGGAGACAGGTTTGGCTGTGTGGCTGCTGAAGGCAGCCCGGCCGGCAGCGCCTTGGGGACAGGGAGGAGCTACGGTC
120homo sapiens
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
2,516,020
0
CTGAACTCCGACGTTGGTTTAGGCTTCGTGAAAGGCTTCTCCGAAATGTTCGAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCA
85Shigella flexneri 2a str. 301
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,771,200
1
GAGTTTCATTGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCACCTCAGCCTTCCAAAGTGCTGGGATTACACGCATGGTTACAGGCCAGCCATAGGAGGATCTTTAGAAGGAAAACAGCTGCCCCACGTGGTGGCT
120homo sapiens
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
2,531,750
0
CCTCCACTTCAGCAGGATCACGGATGAATCGCGATAATAAACGCGCCAGTCGTCTCTGATACTTGATAACCAGCAGGTCAAACGCACGCTTGTCACCTCGTTGTACCTGTTCTACCAACTGCTGATCGATTTCACGATCACTCATCTCTC
69Nitrosomonas europaea ATCC 19718
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
3,709,420
0
TGTCGGCATCGGCGCCGGGAAAGGTGGTGGTGATGGTGATGACCGTGTTGGTCATCTCGGGATACTGGCGCACCGGCAGGCTCATCAGGGCGCGCAGGCCGATGAACAGGATCAGCAGGCTGACCACCGCGGCCAGTACCGGCCGCTTGA
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,051,700
1
AGGTTGGAAGAATGTGGAGAGATCAGAAAAAGATATGAAGATGAGGGAAAATTTGGAATTTTCTAGATAATTATTTAATGATTGTGACCAAAATGCTGATAGTGATATGGAAAGTGAAGTCCAGACTGAGGAGGTCTCAGATGGAAATTA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,035,000
1
TGCAGTTTCAGGGACCTGGCGGTGCCCCAGGGGCAGGGTGTTCCTCCCATGGTCAGGTGGGGGGACCAGGCCAGGAGACAGCCCACCCAGAGGCCACATGAGGCAGCACATTTGGGTCTGGCAGAAGTGTTGACAGATAACCTTGGAATG
120homo sapiens
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
411,190
0
TGCTGGAGCCTTCGGCCACCTTGACGATGGGCGAGTGCTTTTCGCACACCGCCGTGCTGTCGATGGCAAACGCGGCGGGGCGACCGTTGATGAACACGTTGGGCGAGCCCGACTCGATCTGCCCCGCCGCAGAGCTGAAGGCGGCGCCGA
119[Pseudomonas syringae] pv. tomato str. DC3000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,400,200
1
ACAAGCAATTTAACATGACCAAAAAATGTACTTTTGTCTCTGCCAAAACCTGGTCAGCCAGCCCTGGTAGTCTCAATACCAGATTGATTTCTGCCATATGCAATTTCATGACTGTTTTTCAAACAATGCATTTTTATTGTATTTCTCTTT
120homo sapiens
G000007485
ASM748v1
GCF_000007485.1
PRJNA224116
SAMN02603248
null
2003/02/24
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/485/GCF_000007485.1_ASM748v1
637,000,331
RS_GCF_000007485.1
Monoisolate
Complete Genome
Full
representative genome
Major
203,267
2,039
Tropheryma whipplei str. Twist
strain=Twist
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
null
Tropheryma
Tropheryma whipplei
true
Eubacteria
Actinobacteria
1
1
1
1
927,303
1
46.33
927,303
1
934
278,179
88.37435
76.27
0
0
224
yes
yes
yes
20
medium
870,740
0
GGGGTGTAAAACACACCAACCAGTTCACCTGTTGGTCCGTCATAAGTGGCATACAGATCAGCTGTTGTAAATGGCACATGCCAGGTTGGGTCATAGGCAGGAGCGGCCCATGCAGCTGCGATAGTTCCCTTACTGATTTCAGAGGAAGCA
106Tropheryma whipplei str. Twist
G000007865
ASM786v1
GCF_000007865.1
PRJNA224116
SAMN02604086
null
2004/01/30
Univ. Minnesota
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/865/GCF_000007865.1_ASM786v1
637,000,168
RS_GCF_000007865.1
Monoisolate
Complete Genome
Full
representative genome
Major
262,316
1,764
Mycobacterium avium subsp. paratuberculosis K-10
strain=K-10
null
Bacteria
Actinobacteria
Actinobacteria
Corynebacteriales
Mycobacteriaceae
Mycobacterium
Mycobacterium avium
true
Eubacteria
Actinobacteria
1
1
1
1
4,829,781
1
69.3
4,829,781
1
4,544
1,497,326
91.345322
99.28
0.33
0
336
yes
yes
yes
20
high
3,569,410
0
CAGCCGCTGGGTGACGTGCAGCTGGCGGCGGCGCGCGCTCACCGCCCAATTCACTGCGCGCAGTTGGTCTCCGGGCACATAGGGGCGTATGTCGGCGTATTCCACGCCGGGCCCGACATGCCGGGTCAGGTGGGCGCCCAGCCGATCCAG
65Mycobacterium avium subsp. paratuberculosis K-10
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
394,680
0
TGTTGAGCGGTTTAATAACTTTAACGGACCAGCTAAAGACAGATAGCCAAGAAACAGTTAAGCAGTTACAAAGATTAGGATTTAATTTAGTTTTACTTACTGGTGATAATAAGGCTAGTGCAGATGCCATAGCACAAAAATTGGGTATCA
91Streptococcus agalactiae 2603V/R
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,165,900
1
TGATAAAAACTTATTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCATCTGAGGTCAGGAGTTCGCGACCAGTCTGACCAACGTGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGCGCGTGCCTGTA
120homo sapiens
G000007225
ASM722v1
GCA_000007225.1
PRJNA172
SAMN02604075
null
2002/01/24
UCLA/CalTech
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/225/GCA_000007225.1_ASM722v1
638,154,513
GB_GCA_000007225.1
Monoisolate
Complete Genome
Full
na
Major
178,306
13,773
Pyrobaculum aerophilum str. IM2
strain=IM2
null
Archaea
Crenarchaeota
Thermoprotei
Thermoproteales
Thermoproteaceae
Pyrobaculum
Pyrobaculum aerophilum
true
Archaea
Crenarchaeota
1
1
0.8
0.6
2,222,430
1
51.36
2,222,430
1
2,631
675,358
89.497712
100
0.74
0
176
no
yes
yes
16
medium
295,620
0
CTCCTCTCCGGCGGCAACACGTAGATCCCGTTCTCAAAGGGGTAGGGGACGTAGGCGCCGTCTAGCAACACGAAGGCCCTCCTCTCCTTAGCCGCCCAACGGCCTCCGAGAGAGAGAATGCCCTCAAGGACGGAGCGGTCCCGGCTGAAA
79Pyrobaculum aerophilum str. IM2
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
658,190
0
CTCTACATCATCATATCCCCTCTCTGTGAACCTGCTAATATGGTACTCAATCTTTGAGGGGGATGGTGCATCCCTGAGTATTATGTTGGTGCCCTCGTGGCCCCCATGGATCTCCAGATCCGCAGAGTCAAGGAGCCTCTCTGTTATGCT
62Methanothermobacter thermautotrophicus str. Delta H
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
316,050
1
CCTGTAGGAGGTGTCTGGAGACCCCTGTTGGGAGGCCTCACCCAGTCAGGGGAAACAAGATCAGGAACTGCTTAAAGAAGCAGTCTGGCTGCCCTTTGGCAGAGCAGGTGTGCTGTGCTGGCCCTTTGGCAGAGCAGGTGTGCTGTGCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,355,750
1
GCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTCTGAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGTGCATGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,336,950
1
CTGGTATTTACATCTTAACAACAAAGATTATGTGAGGGAAAGGATTTAAGGTCTAGTAGGTATTAATCTTGCTCATAAAATATTAATTATTCATTATATTTATAAAGTATAAAGCTCTGTGTAAGACAGTGTGCTGGGCCTTGAGAATGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,281,300
1
ATCACCACCACCATCATCATCGTTACCACCACCAACATCATCGTTACCATCACTATCATCATCACCATACCATTATCATCATTGCCATTATTATCACCATCTTCACCATTACCATCATTATCACCATCATCACCATCACCACCACCATCA
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
5,926,700
0
TATCATTTCCACTAGCTAAATTAATTGTTTGTGAGAAAAAGTGCAGTGATAAAACGGTTCTTTTCGGTTCATTGTAGAGAACAACCTCTATAGGAGTCTCATACAGTCGTGATTGAAAATTTATGTTCTAGGAGGTACTTAATCATGGAA
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,659,500
1
TCCGGCTGGAATGCAGTGGTGGTCTCGGCTCACTGCAGCCTCAACCTCCTGGGCTGAAGTGATCCTCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCTACCACTCCTGGCCCTGTTGGGTTATTGGTGATTAGTGAGCT
120homo sapiens
G000010665
ASM1066v1
GCF_000010665.1
PRJNA224116
SAMD00060954
null
2009/06/11
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/665/GCF_000010665.1_ASM1066v1
644,736,352
RS_GCF_000010665.1
Monoisolate
Complete Genome
Full
representative genome
Major
573,370
184,917
Desulfovibrio magneticus RS-1
strain=RS-1
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfovibrionales
Desulfovibrionaceae
Desulfovibrio
Desulfovibrio magneticus
true
Eubacteria
Proteobacteria
0.99
0.996
1
1
5,315,620
3
62.67
5,248,049
1
4,555
1,546,858
85.744052
100
0
0
357
yes
yes
yes
20
high
2,886,260
0
TGGTGAAATGGGTGGTGTCCAGCACCATGTCGGCGGCGTCGCGAAGGGGCCGCATGCGTTCGCGCTCGGCCAGGGCGGCCTGCTCCAGGCCCATGTCGGCGCTTTCCAGGGGATGGGGCCGGCGGGTAGTGGCGTAGCGGCGGATGATCT
36Desulfovibrio magneticus RS-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,850,450
1
GTGTTTGTGCGTCGAGTTCTGTGTGACATAGGCTGGGGGCTTGGGGGCTTCCAGTGGAGGAGCCTGATGGAGCTCCATGGTCAAGAGGGCCTGGAAAAGTCAGGGCCTTGGGCAGAACACGGGGGCCTGCCTGGTGCTCAAAGCACAGGG
120homo sapiens
G000007925
ASM792v1
GCF_000007925.1
PRJNA57995
SAMN02603142
null
2003/07/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/925/GCF_000007925.1_ASM792v1
637,000,213
RS_GCF_000007925.1
Monoisolate
Complete Genome
Full
reference genome
Major
167,539
1,219
Prochlorococcus marinus subsp. marinus str. CCMP1375
strain=CCMP1375; SS120
null
Bacteria
Cyanobacteria
null
Synechococcales
Prochloraceae
Prochlorococcus
Prochlorococcus marinus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
1,751,080
1
36.44
1,751,080
1
1,908
529,797
89.120257
100
0
0
312
yes
yes
yes
20
high
237,120
0
CATCATCACAAAAAACTATTACATGCGCATTTGCACCAAGCCCTGAGAATTCCATATCTTCTGAGACTATTGTTTCAGGCCCCCTACCTGTGGCATGTTTCATAACTGTATAACCTGGCACACCAGCGGATTCAAGAACTTTGACAATTG
76Prochlorococcus marinus subsp. marinus str. CCMP1375
G000007085
ASM708v1
GCF_000007085.1
PRJNA224116
SAMN02603009
null
2002/05/14
Beijing Center.HGP
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1
637,000,318
RS_GCF_000007085.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,068
911,092
Caldanaerobacter subterraneus subsp. tengcongensis MB4
strain=MB4
null
Bacteria
Firmicutes
Clostridia
Thermoanaerobacterales
Thermoanaerobacteraceae
Caldanaerobacter
Caldanaerobacter subterraneus
true
Eubacteria
Firmicutes
1
1
1
1
2,689,445
1
37.57
2,689,445
1
2,674
812,453
88.995016
99.04
0.6
0
329
yes
yes
yes
20
high
1,944,930
0
GTCCCTATATCAGAGTTTTCAGGAATTGTCGCCAATTTCTGTTTCACAGCTTCAAAACCTCTGTCCATGTTTATTCCATGGTCAGCGTCCCCTATCGCAGAGTCCAGTTCCGTGAGATATTCTTTATTTTCCCTTATCACTTCCACAATT
18Caldanaerobacter subterraneus subsp. tengcongensis MB4
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,603,800
1
AAGTCACCTGCAATTGTAAGTTCATCACAGCATAATTCACAATAGCAAAGACATGGAATCAACCCAGGTGCCCATCAACAGCAGATTAAATAAAGAAAATGTGGTACATATACACCATGGAATACTACACAGCCATAAAAAAGAACAAAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,494,950
1
GGAAATGGAGAATAGAAAAGACTACATACATATATTTTTTGTGTTTTCTTCTTTTAATTTCTTTTTAAAAACCATCAAGATTATTTAAAGCAATGACTATACCACTGACTTATAATATATGTAGATATAATGCATATGACAAAAATAGAA
120homo sapiens
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
1,505,660
0
CGCTGCAGCACGTCGTACAACAGGCCACTGGAGGCCTGCAGCTGGCGCAGGCTGCGCGGCGCACGCCCAGGCAGCGATGGCGAGAGCAGCCCGGCGACGCGCGCAATCTCGCGAAACTGCCGGCGTGCCAGCTCGCCCAGATTGAGGCTG
112Xanthomonas campestris pv. campestris str. ATCC 33913
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,304,850
1
AGAAGCACTTTATAAAATCGGATAATACAATGTTAAGGATTAGGTCTTTAGATTGCTCAAGCCAAGACCAGTTCTTCTGATCAGATTTTTTTATCAAAATGCTTTGTCTTCTTACTAATTGTCCAGCCTGAGCAAGCCTCTCTGTAGAAT
120homo sapiens
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
1,034,930
0
AAGGCCTTGTTGAAGTCGGTATACAGCTCGCGGGTGGGGTCGTAGCTCACATTGAGCAGATTGATGTCCGCCGCGCGCGCGGGAGCGCCGGCAAGGCTCAGGGCAAGCGGGGCGGCGAGTAGGGCCGCTGCCAGACGTTTGAACATCAAG
4Azorhizobium caulinodans ORS 571
G000008665
ASM866v1
GCF_000008665.1
PRJNA224116
SAMN02603985
null
1999/12/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/665/GCF_000008665.1_ASM866v1
638,154,502
RS_GCF_000008665.1
Monoisolate
Complete Genome
Full
representative genome
Major
224,325
2,234
Archaeoglobus fulgidus DSM 4304
strain=DSM 4304
null
Archaea
Euryarchaeota
Archaeoglobi
Archaeoglobales
Archaeoglobaceae
Archaeoglobus
Archaeoglobus fulgidus
true
Archaea
Euryarchaeota
1
1
0.9
0.9
2,178,400
1
48.58
2,178,400
1
2,518
688,447
93.086761
100
0
0
186
no
yes
yes
17
medium
508,820
0
ATCTGGAGGGCTACAGAACGGGGAAGCAGCTGTTTTAGACATCAATTGCGTCCCCTCTAACAACTACATTTGTTGCAAAGGACACTGCAGCCAAACCACTTTTTTTCGCACACCTTTATCGCAGAATCCAGTATCGCCGCCTTGGACACC
3Archaeoglobus fulgidus DSM 4304
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
538,200
1
CTCCCAAGTAGCTAGGACTACATGCCTGCCACCATATCTGGCTAATTTTATTTTTATTTTTTGGTAAAAAGGGTGTCTTGCTGTGTTTCGCAGGCTGGTCTTGAACTCCTGGGCTCAAGCGCTCCTCTCTCCTGTCTTAATGCATGTGTA
120homo sapiens
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
1,827,670
0
ATCTGTTTACGCAGAGATGCTAACGTATAGTCCTTTATATTCTGTCCATTCAAAGTAATCTCGCCGTGCGATGGATCATAGAACCTCGGCAGCAATGAACAGATTGTCGTCTTGCCCCCACCACTCGGTCCGACAAGTGCGATATGTTCC
55Macrococcus caseolyticus JCSC5402
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,222,450
1
GGGCACCAGTGACTTTGCCTCTTCTCCTCCTCCTCTTCTTCCTCGTCATGTTTTAGCATAAGAAGCTTTATTGAGCTAGAATTCACATACCATACAATTCATTTAATGTGCACAATGCAATGGTTTTTTGTTGCTGTTGTTGTTATTGTT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,481,200
1
GATTTCTCAGAGCCTGCTTGGAATATGCTGATCACTGACACTAGTTATTGGTCCGGAGGTAATGAGGAGCGGAAGAGGGAACCCGAGGATAAGAAGCATCACCTTACGGAGCATTATCAGATGAAGGCTTGCCTTTTCATAGTCACCAAT
120homo sapiens
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
1,032,590
0
CAGACTCTTGATGATTCGTCCGGGCATAGCGCCAATATAAGTTTTGCGGTGACCGCGAATTTCTGCTTCATCGTGCACACCACCCAAAGACATACGGACATATTTTCGTTTCAGTGCCGATGCGATGGATTTTCCGAGGGATGTTTTACC
11Bacteroides thetaiotaomicron VPI-5482
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,423,650
1
AGTAAATGTCACCAAGACTCTGAACCCCAAAGACGAAAAAACCTGTGCAGCTCCATGAGGGCCACTGGCTGCCAACACAGAGACCGTCTCTCTTTGTCCTGGCAGCTGCCTTGGGTGACCACATTGGTTCTCCAGGGTCTTGGTGTCGGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,574,950
1
ATATTTTTTGAGATGGAGTCGCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACTACAGGCGCCCGCCGCCACAT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,454,350
1
CCACATGCCGAAGTCCTTACCCCCAGAACCTGTGAGTGCGACCTTATTTGGGGATAGGGTCTTGACAGAATTAAGTTGACATGAAGTCATTCAGATGGGCCCTAATCTCACAGGACTGGTGTCCTTCTAAGAAGGGGAGGTTTGGAGACA
120homo sapiens
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
768,040
0
AGTTTACTACATCTGATGACACAGTCCAATTTGGACAAATTAAATCCAAAATTGATTATACAACTAACGCTTCTCATTAATATGTCTTTGATTTTTATTAACCTCTTGACTGGGGGGAATTATGGCTTTATGATGAAGACACCAATACTA
91Streptococcus agalactiae 2603V/R
G000010285
ASM1028v1
GCF_000010285.1
PRJNA224116
SAMD00060935
null
2008/04/17
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/285/GCF_000010285.1_ASM1028v1
642,555,133
RS_GCF_000010285.1
Monoisolate
Complete Genome
Full
representative genome
Major
378,753
72,000
Kocuria rhizophila DC2201
strain=DC2201 (= NBRC 103217)
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Kocuria
Kocuria rhizophila
true
Eubacteria
Actinobacteria
1
1
1
1
2,697,540
1
71.16
2,697,540
1
2,314
807,429
88.19847
98.68
0
0
324
yes
yes
yes
20
high
2,660,840
0
CCAGACGTGAACTCCCGAGCGGCTGTGAGAGGAGCAAGAGGTTGCGTAGGAGGACCCCGTCAGCTTCTCGCGCGGACACGACGGCGCGTTCCATCCGGTCGAGATCCTCTGCAATAACCGGCGCGAACCTCACGGACACGATGTCCGACC
51Kocuria rhizophila DC2201
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,265,650
1
TGCCCTTGGATGGGCTGGCCTACAGTCAGGGGCCTTCCTTGTCTGTCTTACTTTCCCCGCTCTGCCAGAGTGAACCCAAGGATGCCGCCAGCCTCACCGGCTTCATGTCCAAAATGGAACTTCGAAGGGTCTTCCCCACGCATCCTGACT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,835,150
1
ATTTGGGTGTGTTACTACAGCCCATTTGCTGAGTCACCCTAACGCTTCTAGTTTTGAGTGGGGCCCGTAGCAGAAGACTGCAACAGGTCCAGGCTGCTGTGCAACCTGCTTTGCCACTTGGGCCACCAGCAGATCCAGTGGTGGTTGAGG
120homo sapiens
G000006845
ASM684v1
GCF_000006845.1
PRJNA57611
SAMN02604088
null
2005/02/14
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1
637,000,188
RS_GCF_000006845.1
Monoisolate
Complete Genome
Full
reference genome
Major
242,231
485
Neisseria gonorrhoeae FA 1090
strain=FA 1090
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Neisseriaceae
Neisseria
Neisseria gonorrhoeae
true
Eubacteria
Proteobacteria
1
1
1
1
2,153,922
1
52.69
2,153,922
1
2,142
609,210
83.31778
99.82
0.21
0
323
yes
yes
yes
20
high
197,730
0
AAGGCGATTGCCGTCAGCACCTTTATTATTGCCACCGAACCCTTGGGCGCGCGCACAAAAGGGCTTATCCGCAACAATATGGCAGTATGCGACAACCGCCATATTTTGGATTATTACCGCCTCAGCGCGGACGGCAGGCTGCTTTTCGGC
66Neisseria gonorrhoeae FA 1090
G000007925
ASM792v1
GCF_000007925.1
PRJNA57995
SAMN02603142
null
2003/07/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/925/GCF_000007925.1_ASM792v1
637,000,213
RS_GCF_000007925.1
Monoisolate
Complete Genome
Full
reference genome
Major
167,539
1,219
Prochlorococcus marinus subsp. marinus str. CCMP1375
strain=CCMP1375; SS120
null
Bacteria
Cyanobacteria
null
Synechococcales
Prochloraceae
Prochlorococcus
Prochlorococcus marinus
true
Eubacteria
Cyanobacteria
1
1
0.9
1
1,751,080
1
36.44
1,751,080
1
1,908
529,797
89.120257
100
0
0
312
yes
yes
yes
20
high
878,800
0
TAAACTTTCTTCTTCTTATCAAGAACAGATTGAAGCATTAATTGATGGTGAAGTAGATCTAATATTGTTAGAAACCTGTCAAGATGTTTTACAAATTAAATCGGCATTAGTTGGAATTAACAACGCTTTTGAGATTAAAGATAAATATTT
76Prochlorococcus marinus subsp. marinus str. CCMP1375
G000008025
ASM802v1
GCF_000008025.1
PRJNA224116
SAMN02604000
null
2004/02/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/025/GCF_000008025.1_ASM802v1
637,000,339
RS_GCF_000008025.1
Monoisolate
Complete Genome
Full
representative genome
Major
163,164
163,164
Wolbachia endosymbiont of Drosophila melanogaster
strain=wMel
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Anaplasmataceae
Wolbachia
Wolbachia endosymbiont of Drosophila melanogaster
true
Eubacteria
Proteobacteria
0.96
1
0.9
1
1,267,782
1
35.23
1,267,782
1
1,276
363,312
84.420744
99.79
0
0
229
yes
yes
yes
20
high
934,960
0
GCTCTACCAGCTGAGCTATACCCCCAGGTAATTCTTGCTTAAAGCATAAATCACTCAGGCTGAAATGCAAGAAATATTTATCTATTAGGCTATTGCTAAATAGTGTACAAATTCTGCAGGGTGTACACACTTCTCTATTTTTTTGTCTCC
110Wolbachia endosymbiont of Drosophila melanogaster wMel
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,045,200
1
GGACTTGCCAGTTTCCATAACCACGTGAGCCAATTCCTTAAAACTTCAGCAACCCCTATACACCACACACACACACACACACACACACACACACACACACACACACACACACATCCTATTGCTTCTGTTTCTGTACATAGTCCCTAAGGC
120homo sapiens
G000007225
ASM722v1
GCA_000007225.1
PRJNA172
SAMN02604075
null
2002/01/24
UCLA/CalTech
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/225/GCA_000007225.1_ASM722v1
638,154,513
GB_GCA_000007225.1
Monoisolate
Complete Genome
Full
na
Major
178,306
13,773
Pyrobaculum aerophilum str. IM2
strain=IM2
null
Archaea
Crenarchaeota
Thermoprotei
Thermoproteales
Thermoproteaceae
Pyrobaculum
Pyrobaculum aerophilum
true
Archaea
Crenarchaeota
1
1
0.8
0.6
2,222,430
1
51.36
2,222,430
1
2,631
675,358
89.497712
100
0.74
0
176
no
yes
yes
16
medium
408,850
0
AGGGAGGTTTAGAGGAGATTATTGAGATAATTGAAACTGCGAAGATCCCAATCATTATGACGGCAAATAACCCCTACGACCCAAAATTCCGACCTCTGAGAGACATATCATTAGTGGTGAACCTAAAGAGGCTTTCGGAAGAGGAGGTAG
79Pyrobaculum aerophilum str. IM2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,631,200
1
CCCTAGAAATCAGCCAGTTCTCCAAGGAGCAGTCCTGGTCTACTGACTCCAGATGTATGATTCTATGCATGATTCTGCCTTTTGACACTAAGGAGAGGAATATTCTGTCTTGTAAATATGAAGATCAAAGTGATTTTCTAATTCCGGCTG
120homo sapiens
G000007985
ASM798v2
GCF_000007985.2
PRJNA57743
SAMN02603989
null
2012/07/31
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/985/GCF_000007985.2_ASM798v2
637,000,120
RS_GCF_000007985.2
Monoisolate
Complete Genome
Full
reference genome
Major
243,231
35,554
Geobacter sulfurreducens PCA
strain=PCA
null
Bacteria
Proteobacteria
Deltaproteobacteria
Desulfuromonadales
Geobacteraceae
Geobacter
Geobacter sulfurreducens
true
Eubacteria
Proteobacteria
1
1
1
1
3,814,128
1
60.94
3,814,128
1
3,417
1,176,369
90.878544
99.35
0
0
363
yes
yes
yes
20
high
1,604,590
0
ACGTATGCCGAGGCGATCCGCCGCTACGGCGTCGATAACCCCGATGTCCGTTTTGGCCTTGAATTGGTGGAGCTGACAGACATCGTCAAAGGATCCGGCTTCAAGGTTTTCGCCGATGTGGCCGCCGGCGGGGGTATCATCAAGGGGCTC
43Geobacter sulfurreducens PCA