#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
unique_name
stringclasses
121 values
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
autotrain_text
stringlengths
150
150
autotrain_label
class label
2 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,400,300
CTCCGTTCCCCCCTGCAAAACAAACAAACAAACAAACAAACAAACAAGCAAAACTACCCTATTTCCAAATAAGGTCCCGTTCACAGGTACTGGGAGTTGGGACATGAACATATCCTTTTGGGGTCACAACTCAACCCATGACAAACCCCA
11
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
3,807,180
GCCCTGTGGAAGGCCACGAACGGCACGAACAAGGAGTACGAGGCCGCCAACACCTCCGGCTACGACCAGATCAGCGCGGTCGGGCAGGGCACCGACGCCCACCAGGTCAAGGTCACCTTCTCCTCGCCGTACGCCGACTGGAAGCGGCTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,320,200
ATCTGCCTATATTCCTTGTGATAGCACTATGCTTTTTCATAAATAAGCTCCCTCCTTGCCTTTCAAAGCATGTTTTGGGCAAACTTCTTTCTCAGGAGCTTGATCTTCAGCTCTGTGAAATTCCTTTGCTTTTTCTTAAGGGTTTCTGGC
11
G000009185
ASM918v1
GCF_000009185.1
PRJNA224116
SAMEA3138195
null
2006/06/22
Max Planck Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/185/GCF_000009185.1_ASM918v1
637,000,129
RS_GCF_000009185.1
Monoisolate
Complete Genome
Full
na
Major
362,976
293,091
Haloquadratum walsbyi DSM 16790
strain=DSM 16790 = HBSQ001
null
Archaea
Euryarchaeota
Halobacteria
Haloferacales
Haloferacaceae
Haloquadratum
Haloquadratum walsbyi
true
Haloquadratum walsbyi DSM 16790 DSM 16790 = HBSQ001
Archaea
Euryarchaeota
1
0.997
0.9
1
3,179,361
2
47.86
3,132,494
1
3,071
845,315
78.317152
99.3
0
0
220
no
yes
yes
19
medium
3,159,390
TCCCCGATGTTTGAGTGTGAATATCGCTGCAGCATAGAGTGTGATGTCTTCGATATCGTTCCCAGCTAACCCACGTCTGAGACGGACGTGTTCGATCTCTTTAGACGACTTTGTAATTTCTCATCCTCTCCATCATTCACTGTCGCAACG
0no label
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Bacteroides thetaiotaomicron VPI-5482
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
4,030,650
TATTCTACTGTCTCTTTGTATTTTCACTTATGCACAGAAAAAGATTGCACGTGAATATATCGAATGGTCTGACATTTGGATTCCCGGAGCTAACAAAACAGATCTTCCACACGTACTGCTTATCGGAAATTCCATCACACGCGGATATTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,878,500
CTCCGGGCTCCTTTCTACCTCTTTCCTGAGTATGCCGATACAGTTTTTTCTAGGTTTTAGTCTCACGGCAGATGCAGTTGTGACCTTTTTTTCACTTGACATGGGAAACCTTTTCCCTTGTGCTCTTGTACAGAGATCCTTCCCATTAGC
11
G000010525
ASM1052v1
GCF_000010525.1
PRJNA224116
SAMD00060925
null
2007/10/16
University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/525/GCF_000010525.1_ASM1052v1
641,228,476
RS_GCF_000010525.1
Monoisolate
Complete Genome
Full
representative genome
Major
438,753
7
Azorhizobium caulinodans ORS 571
strain=ORS 571
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Xanthobacteraceae
Azorhizobium
Azorhizobium caulinodans
true
Azorhizobium caulinodans ORS 571
Eubacteria
Proteobacteria
1
1
0.9
1
5,369,772
1
67.32
5,369,772
1
4,810
1,620,542
88.922714
100
0
0
358
yes
yes
yes
20
high
3,819,530
CTCGGTGCCGAGGCGAGCGAGGCGCGCTTCCTCATAGACACCGCGCGTCACGTCCACGCAGCCCTGCCAGGTTGCGGAGGGGTGGATGTTCACCTCGATGACACCCGGATCGGGCGCCACCTGAATGACGTTGAGGCGATAGTCGAAAGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,015,300
GGTGCAGCACCCAGGAATGAATACGGGGGTTCCCCAGCACCCTGTAGAATAGAAAGGGCAGACAAAGTGGGGAAGGGAGGCACGCTGACAGGGAAGAGGTAGGAAGCCCTGTGTGGCTGCCTGGGGTCCCCACCACCACCAGGCAACCAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,134,600
GCCCGCGGGAGACGCGGCGGGCCCTAGCTGCCGCCTTCCGCATGTGGAGCGACGTGTCCCCCTTCAGCTTCCGCGAGGTGGCCCCCGAGCAGCCCAGCGACCTCCGGATAGGTGGGCGCCCGCCCCCGCCCCGGCCCGGCCCTGCGCGCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
40,350
GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGGTCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGTCAACATGGTGAAACCCCGTCTCTATTAAAAACACAAAATATTAGCCAGGCATGGTGGCGGGCGCTGGTAGTCCCAG
11
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
4,280,640
CCCACTTCGCATCCAGGTCGGCCTTGATGCGGTTATAGCGGGTAATCACATGCAACACATTCATCAATTGACGTTTGTATTCGTGAATACGTTTGATTTGCACATCGAACAACGCCTTTGGATTCACCACCACATTCAGCTGCTGGGCGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,859,150
TCTGTAATCTCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAATCCAGGAGGCAGAGGTTTCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGTGACAGGGCGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAATAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,388,400
TCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCCACCCAAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAAATGGGGTTTCACCATGTTGGCCAGGCTGG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,777,350
CAGTCTCCTGACTTTCTCCATTCTTTCCCCACATCAAAGGTCTTTTCCTTCTCTGAGGAGCAACAGGTAATGCTGCTTTTCCCCCAGGGGTGTGAGGCTTCTGAGAACAGCTCTGGGGAGGCAGGTGGGCTTTATGCCATTTCCACAGCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,447,100
TTCAAGAGCAGCCTGTACAACACAGCAAGACCATATCTCTACAAAACAAAAAACTTAGCCAGGCACGGTGGCACTGTCTGCAGTCCTGGCTTAGCCGGGCACGGTGGCACTGCCTGCAGTCCTGGCTTAGCCGGGCACGGTGGCACTGCC
11
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Magnetospirillum magneticum AMB-1
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
1,760,980
ACCCGCCCAAGAGCCTTCGTCGGCAGACGCCATCGTTTTGTTCGATCTGGTTGGGGAACTTCCTCAAGCTGAGGAAACACACGGGCGATAGCATCCCGCATCCGCTGGGCGGTCCGGCGTCCAACATCGAACATCGTCTCAATGTCGTTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
907,950
GCAACGCCCTGGTTCAAAGAATTCTGCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGTGGTTTCACCACCTTGGCCAGGGTGGTCTTGACCACCTGACCCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,570,000
TGGTCTCTAATTTTTCTGATTCTATAAAATTACATTCTATTTGCTGAAAGAGTACTTTAGAGTTGAAGAAAAAGAAAAGGAGTGGAATTCCCCTGTAAACAGGAAAAACATCCATGTATTTATTGGCCTTAAAATAGTGAAACATCTTGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,771,550
TATCCATGTTGTAGCTCGTGTCGGAGCTCTGTGCCTTTTTCTGGCTGAGTAATATTCCCCTGCGTGGAGGGGCCACACCTTTTCTATCCACTCGTCCCTGACCGGAGGACGTGAGGCTTGTTTGCACCTGTGGGTGTTGTGAATCGTGTT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,357,150
GGTAAAACCCCATCTCTACCAAAAAAAAAAAAAAAAAAGCCAGGCATGGTGGTGTGTGTCTGTAGTTCCAGCTATTCAGGGGGCTGAAATGGGCAGATCGCTTGAACCTTGGGAGGACGGAGATTGCAGTGAGCTGAGATCGTGCCACTG
11
G000011065
ASM1106v1
GCF_000011065.1
PRJNA62913
SAMN02604314
null
2003/03/28
Washington University Department of Molecular Biology and Pharmacology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/065/GCF_000011065.1_ASM1106v1
637,000,026
RS_GCF_000011065.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,186
818
Bacteroides thetaiotaomicron VPI-5482
strain=VPI-5482
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides thetaiotaomicron
true
Bacteroides thetaiotaomicron VPI-5482
Eubacteria
Bacteroidetes
1
0.998
0.7
1
6,293,399
2
42.86
6,260,361
1
4,944
1,919,297
89.876027
99.41
0.4
0
348
yes
yes
yes
20
high
2,157,220
ACGACTCCAAGAAGTCGGGTGGTTTCACTTGTTCTCACTTGCGTTTCGGTGATACTCCGATCCGTTCTACTTACTTGGTAAATACTCCGAACTTCGTTGCTTGTCACGTTCAGGCTTACCTGCACATGTACGACGTAACACGTGGTTTGC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,837,550
AAAGAAGGGCAGTAGAGTCTTTTGAAGTTGCAATTACAATGCCAGCTAGGTGACAATACTTTGTAGGGCTGGGTCAGGGGTCTTCAAAAGGCTCTATGTACTCTGTATCAGCATCCAATATATGGTGCTGGTTTCTCCCGTAGCCAGGAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
85,350
CTGTGGGAGTTCAGTCAGGCTGGTGGGAAAAATTTTAAAGATAGTTATAAGAAATCGACACAAACCTTCATGGAAGGCTGGGGGTGTTGTATAGCTTCAGTAATAGATCTGAATGAAGGCGGCCTAATCCTTCCTTGAGTAAATAGCTTA
11
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Sinorhizobium meliloti 1021
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
1,324,570
GTGGCTCACCTCGGTGTCGCACTCTGGAATTTCTGGGGCGCGCTGTCACTGCTCGGCCTCGGCTGGAATTTCGGGTTCATCGGCTCCACGGCGATCGTCGCGCAGAGTTACCGGCCGCATGAGGCAGACAAGGTCCAGGGCTTTCACGAT
0no label
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Staphylococcus haemolyticus JCSC1435
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
215,150
TGAATGGCACAAGACAATGGAAAATTAAAATGGTCAAGCTTAATTATGGGAACGTTACTCTTAATTGTTGCAGTTATCATTTTCAGTTATCCTGTTAAAAATTTCTACACACTTACTTGGCTTATTGGCTTATTTATTCTTATTAATGGT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
300,900
TTTTTTTTTTTTTGCTGTACTTAACTGAATACTCATATTTATAGTGTGAGACAAATGTAATGTTGTGTATAAATAGAACTAGGAAAATGTCTTAGTATTTAATCGAGATGGAAGTCTGGGCCTACCTCCTCTCTTTTATTAATATGTAGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,323,650
ACGCAACCAGGGGAAGGCTTGCAGAGAACTAAAGAGGTGCCCCTCCCCAGATAAGAAGGAATTCACTCTGCCTTCAGCTTTAAGGAAACCAGGGGCTCCTGCGGGGTCTCGAGGCTGCAGATGGCAGATGGTGGGCTCCATTGGCCTTCC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,571,300
ACCTTATTCATCTTGGTGAAAATCTGGTTGATCTCTATGAACGTCTTGGCCTTGGTCTCCGGGACAATCAAGAAGATGTAGATGGTGGTGAGGAGGCAGATCACGGCGAAGACAATGAAGCTGTACGGGCCGAGGCCCTCCTGCGGGAAG
11
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Methanosarcina acetivorans C2A
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
2,834,520
ACAGAAGAAGCGAGCATTACACTATCTCAGGGGTGTATAAAACTATAATTTGTGCATTGGAGGTGTGTAATGGCGGAGGATCAGTCAGCTTATGCACGTGCTTTTGAAGAATGGAAAGAAGCCAGGTCAGTTATTTCCAGATTTGATGGA
0no label
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Pseudomonas putida KT2440
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
1,508,390
CGCTGGACCTGGCTGGCGGTTTGCTCCGCGAGGCTCTTGAGGTCGGCGCGTGGGGTCTGCCCGGCCAGCAGGACGATACCGTTGTAGCTGCTGACAACGATGTGCGAGCCCTTGTCCAGGTTTGGGTTGGCTTTGGAAATGTTCACGGCG
0no label
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Bacteroides fragilis YCH46
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
3,055,000
CACTGGAAAGTGGCAAGGCACGGGAGACTTTAAAGAAATTTGTCGAACTAAACGGATAGAAAAGCTATCACCCATCAAAGAAACATGAAAGATATATTATCTGAAATCATTGCCAATAAACGTTTTGAGATCGACCTGCAGAAACAGGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,090,500
CATATTTTGAAGAAAGTAAATCTATTATTATTTTTTCTCTTTTTTCTTTTTTTTTTTTAAATTACTTTAAGTTCTGGGATACATGTGCAGAACGTGCAGGTTTGTTACATAAGTATACGTGTATCACGGTGGTTTAGTGTACCTATTGAC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,901,450
TGGACCGAGTCTTGCTCTGTCGCCCAGCTAGAGTGCAGTGGCGTGATCTCAGCCCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGATTACAGGCACACACCACCACGCCCAACTAATT
11
G000010345
ASM1034v1
GCF_000010345.1
PRJNA224116
SAMD00060915
null
2007/07/11
Japan Agency for Marine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/345/GCF_000010345.1_ASM1034v1
640,753,056
RS_GCF_000010345.1
Monoisolate
Complete Genome
Full
na
Major
387,093
387,093
Sulfurovum sp. NBC37-1
strain=NBC37-1
null
Bacteria
Proteobacteria
Epsilonproteobacteria
null
null
Sulfurovum
Sulfurovum sp. NBC37-1
true
Sulfurovum sp. NBC37-1 ASM1034v1
Eubacteria
Proteobacteria
1
1
0.9
1
2,562,277
1
43.87
2,562,277
1
2,552
795,482
91.463999
99.59
0.61
0
334
yes
yes
yes
20
high
211,250
ATTATACATGTTTATATCAAAATGTCACAAAAAGGAAAGATCTAATGTTATATTACTATGCACACACAGGACACAAAATAGGCCTGGACAGACTAAGAAGAGCTGCGGCTGTCATCAAGCGACTTGCCAAAGAGGGAATCGAGTGCAGAC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,694,850
GTTGCCATTAGGATTCGGAACAGTACTTTCAGGAGCCACCAAATGGAACCTCACATCTGCAGGGACCCGGGGAAAGATCACCTCTCTCCATTTGTGAGAGACACATATGGAAGCAGACAGATGTTCTTGATGAGATGGCCAGTTCAATTT
11
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Microcystis aeruginosa NIES-843
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
1,646,190
TATTTTTGGGAATATTGATCGAAACGTCTCGTACTGCTCGATAATTTCCATAGTAAATATTAGCCTTATCAACCTTTAAAACGGTTGCAGTTGATTGGGTAGTGCGATTAGTTAGCATAAATTATTGACCTTGAATTTGGATAATTGAGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,369,900
ATCTGTACTTTTGAATGTATAGTGACTCTATCTGAGACAGTAGATGAAGCGCACACAAGAAAATTTTCCAAGATGCTGCACCTTCTGAGATGACTGTTGCTGATACCATATCACAATAACATATCATCTGTAACTCCAGCAACACTCTCC
11
G000008185
ASM818v1
GCF_000008185.1
PRJNA57583
SAMN02603967
null
2004/02/03
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/185/GCF_000008185.1_ASM818v1
637,000,327
RS_GCF_000008185.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,275
158
Treponema denticola ATCC 35405
strain=ATCC 35405
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Spirochaetaceae
Treponema
Treponema denticola
true
Treponema denticola ATCC 35405
Eubacteria
Spirochaetes
1
1
1
1
2,843,201
1
37.87
2,843,201
1
2,578
885,778
91.799314
100
0
0
281
yes
yes
yes
20
high
1,944,930
ATAGTCGCATGCGATTTTGCCGACTGCGGATATACGATTCTACCCGTTAAAATAGAGCATCCTTATGAAACGGGATACGGAAAAACCATTACTACCCCGTTTTATTTTCAAGAAAATGCAGAAACTTCAGTGGAAGCCGTCAACAAGCTC
0no label
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Streptomyces griseus subsp. griseus NBRC 13350
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
7,717,840
AGGGCTCGCCCCACGCGGTCTTGTCGGGGTGGATGTGCGCGTCGACCAGGGTCGGCAACGCGATCCTCCCCTCGCAGTCGACGACCTGGGCGCCGTGCGGCGCGGGATCCGCGGTGATGACGCCGTCGACCACGGTGAGGTCGACGGGCC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,230,150
ATAATGTTGTTGTAAAGATTCAGTGAGACAGAGTGTGCCAAGTACTCAGTGCCTGGCACATAACAGTTTTCAGTATGTGCCTGCTGCTGTTAGTATAAGGGTGGTGATGGTGATGATGATGGTGACAGTGAGGATGATGGTGGTGATGGT
11
G000008645
ASM864v1
GCF_000008645.1
PRJNA224116
SAMN02603244
null
1999/12/22
Genome Therapeutics Corporation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/645/GCF_000008645.1_ASM864v1
638,154,510
RS_GCF_000008645.1
Monoisolate
Complete Genome
Full
representative genome
Major
187,420
145,262
Methanothermobacter thermautotrophicus str. Delta H
strain=Delta H
null
Archaea
Euryarchaeota
Methanobacteria
Methanobacteriales
Methanobacteriaceae
Methanothermobacter
Methanothermobacter thermautotrophicus
true
Methanothermobacter thermautotrophicus str. Delta H
Archaea
Euryarchaeota
0.99
1
0.9
1
1,751,377
1
49.54
1,751,377
1
1,876
533,233
89.684117
100
0.31
16.67
182
no
yes
yes
19
medium
85,150
TGTTATAATAATCAGCGTGGCACCCCTGATAATCTACAGTGGCCATGGAGAGGATGATGGCTATTTTGGTGGTGCTGATGACAGTGCAGGTGATGCGATAACTGAGACCGGCTACAAACCATGGTTCCAGCCACTATGGGAGCCTCCAAG
0no label
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Bacillus cereus ATCC 14579
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
3,438,370
GGGCTGTTGATTCTGGCCATATCGCAACCGTTTTAACACATCATAATGAACTTTATTTAATTGAAGTAGGATTCGGATCATACTTACCTCTTGCCCCTGTCCCTTTCTTAGGTGAAGTCATTCACTCTGCTACAGGAGATTATCGTATTC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,248,050
CCCAACCAAGAAGCCATGAAAAATGATCTGAGAGTCATATGAAAGGGAAGTCTTCTTCCAACAACTCAGTGGCAGATCTAGACACCAAAATGAGGCAATGGGTTCCAGGAGGATAGCACCAAGGCTGATCTATAGATTAATATTTTCCAT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
342,450
CAGCAGGAAGAAGGGCAGTGTGAACTGCTCACCACTGTCTTCCTGGGTTTGCAGCTCTGCGCCTGGCACAGAGACAGGCTCAGTGACGGTTGAAGGAATCGGAGAAATAATGAAAAGTGTGTTCATCCTGCAGGCAGCAGAGCCTCGGGT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,790,300
TGCCATTTTTTAAAAAGTCAATTACAGGAGTTTGCAAGGAATGGAGTCAGCATTCCCCACGACAGCCTCTCCTCCTCCAGCTCCCTCTCCTCATCCACAGGCACTGGGGCCTTTGCTCCCCTGAAGGAAATGTTCCCTCACAGTGGTCCC
11
G000010585
ASM1058v1
GCF_000010585.1
PRJNA224116
SAMD00060930
null
2009/01/28
Juntendo University School of Medicine
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/585/GCF_000010585.1_ASM1058v1
643,348,562
RS_GCF_000010585.1
Monoisolate
Complete Genome
Full
representative genome
Major
458,233
69,966
Macrococcus caseolyticus JCSC5402
strain=JCSC5402
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Macrococcus
Macrococcus caseolyticus
true
Macrococcus caseolyticus JCSC5402
Eubacteria
Firmicutes
1
0.965
1
1
2,219,737
9
36.56
2,102,324
1
2,352
677,409
89.896055
96.13
1.1
0
339
yes
yes
yes
20
high
677,170
AAGCTTGACCGTGTCGGTAAGGAGCCATTTGAACTGCTGGAAGAAATCGAGAAGACACTTGAAATAGAGACGTATCCGATGAACTGGCCAATCGGTATGGGGCAATCATTCTTCGGTATCATTGACCGTAAGACAAAAACGATTGAGCCG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,117,300
ACCAGCAAGACGACAATGCTGAAGGACTCACCGAGACCCCTTGCCAACCCCACCCTGGACCACCCAGCAGCCCTTCCCGCACACCACACCCGTCACTCTCCCGGCCCCTGCCCGCCTGGTGCGCCCTATGTCTCCCCAATAACTCCTCCC
11
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
110,370
CAAGCATGTGGACTCTCTGATCACTATCCCGAACGACAAACTGCTGAAAGTTCTGGGCCGCGGTATCTCCCTGCTGGATGCGTTTGGCGCAGCGAACGATGTACTCAAAGGCGCTGTGCAAGGCATCGCCGAACTGATTACTCGTCCGGG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,000,850
TGCATGTAGGCTGGGATTTGGGGCTCACACCTCAACCTGCATGCCCAGTTCCATGCCCCTCCCCTCTTGTGAAAGCACCTGTCTACTTGGGCTGAGGATGTGGGGGCACAGGTGGCAGATGAGGCTGCCCTCAGGAGGGGCCCAGGCCCA
11
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Microcystis aeruginosa NIES-843
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
3,846,830
GGCCATCGGCAATTACCCTTACCCAAGCGGCCTGTTCAATAGTTACCTGGGCTGAGAGGGGAACTTTTGGCTGAGGAGAAGGGGAAGGAGAGGCTATCGGTGCGGGAGGGACTACCGGCGCGGGGGAAACCACGGGGGAAGGAGAGGGAG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,589,900
CCTCAGAGCCACTGATTCCGTAGGTCAGGGGGATGCCCAGGACCCTGCCTTTGTAATAAGTTCCCCTGACATGATCAGATGTTGAACAGCCCTGTCCTAGACGGTGAGCGCCATGAGAGCAGGTGCCTTGTGATACACAGTAGGCACCCA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,214,950
CCACAGAGGACGGCACCGAGAGGGCTTCAGGCCTGCTGTCCGGACACTTGTCCACTAATTAGGATTCCCGCGTGGGGCCGCCTGCCGCAAGGGCCTGGCTCACTCCCGCTGGGCTGTGCTAGGCGCAGAGATCCTATCAGCTCTTCTCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,795,000
CCTGTGTGCAGATGATTCACTGATGCTCACTCTTGGCATGGATTCTATTAACTTCCATCAGCAGCGTCCCAAGTAGACTGCAGATCCTTTGGTGCCCGGGATTTCTGTCTTATCCTTCTTAGGAGCTGCTACAGCTCCAAGTGTAACATC
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,567,300
CTTGTAATCCCAGCACTTTGGGAGGCTGATGTAGGAGGATCGCTTGAGGCCAGGTGTTTGAGACCAGCCTGGGCAACATAGGGAGACCCTGTCTCTACAAAAAATACAAAAATTAGTTGGGTGTGATGGTTCATGCCTGTAGTCTCAGCT
11
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Xanthomonas oryzae pv. oryzae KACC 10331
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
4,900,220
AATTCGCTGGCGATATCGAAACTGCGCTCGGCCACCATGTAATGCTTGCGCACGTCGGCCGCCGCCGCACCGCTGCCGGCGATCCAGAACAGCCGTATCAGGCTGATCACCCGTCCCTCGCCGTTGCGGTATTCCAGCACCAGCGCGGTC
0no label
G000010205
ASM1020v1
GCF_000010205.1
PRJNA224116
SAMD00060919
null
2008/05/29
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/205/GCF_000010205.1_ASM1020v1
642,555,145
RS_GCF_000010205.1
Monoisolate
Complete Genome
Full
na
Major
334,380
784
Orientia tsutsugamushi str. Ikeda
strain=Ikeda
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Orientia
Orientia tsutsugamushi
true
Orientia tsutsugamushi str. Ikeda
Eubacteria
Proteobacteria
0.99
1
0.9
1
2,008,987
1
30.51
2,008,987
1
2,188
522,417
76.576503
99.51
0.49
0
186
yes
yes
yes
20
high
63,050
GGTATTCTAGCTTTTTTGCGAATTTTATCCCATGCACATTGTATTGTCTCATTTAACCAGTGTTTGCTATTATCTATTGGGCTTGGCAATACCATTCACTATTTGTTTCTTGCTTTAGGTATTTCAATATTGTTATTAATGCATCAGCTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,789,300
TGAATGATTTTGAATGAATGGACCTTTAAAACAAAGGGCCAGACAGTAAATCTTTTCAGTTTTGCGAGCCAGACTGTCCGTCCCAACAATTCAATTCTGCCATTGTAGCATGAAAGCAGCCATAGGCAATAGTCAAGGAATGGGCGTGGC
11
G000006725
ASM672v1
GCF_000006725.1
PRJNA224116
SAMN02603773
null
2004/06/04
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1
637,000,348
RS_GCF_000006725.1
Monoisolate
Complete Genome
Full
representative genome
Major
160,492
2,371
Xylella fastidiosa 9a5c
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xylella
Xylella fastidiosa
true
Xylella fastidiosa 9a5c
Eubacteria
Proteobacteria
0.98
0.993
0.9
1
2,731,750
3
52.62
2,679,306
1
2,664
765,931
82.59299
99.59
0.18
0
325
yes
yes
yes
20
high
910,260
AAGACACTGCGCGGCCCACGTGGCGGCATTATTGTGGCGCAGGCACCACAGGAGGCGTTGGTTAAGAAGTTGCAGTCGATTGTGTTTCCTGGGATCCAGGGTGGTCCATTGATGCATGTGATTGCGGCTAAAGCGGTTGCTTTTAAGGAA
0no label
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
[Pseudomonas syringae] pv. tomato str. DC3000
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
109,980
GCTCAGCGTGGCAAGGAAAGTCGAATCGGCTCGATTGAGCGTGAAGCGGACCGAATGAGCGTCAGGCGCTTCGATGCTTTTGATCAGCGCAGGCAACTGCATGGACTGCGCATGCGGGAAGCCGCTCTGGGCAATCTTGTGCCACGGATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
256,500
AAACGTCGCGCGAGGGGCGGGGCGCGTACGTGCAGGGAGGGGAGGCAGAGAAAAAGGCGGGGCCGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCGCGTTTCTGGCCCTGCCAGT
11
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Nostoc sp. PCC 7120 ASM970v1
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
7,191,080
ACCCACAGGAACTTGGGAAATGTTGTTATTGGCAACTGTAATCTCAGCTTTGGCATTATCAAATACTTCTACATTGATGCCTTCAGTAAAGTTGAAGTCTCCAGGATCAGTATCTTGAATATTGCTAATTGTGTTACCTGCAATATTGAA
0no label
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
1,878,370
GGTCGCGCGGGACAACGGGCATCTGGAGGACGTGATCCAGTCGCTGATCAGCATGCCGGGCGTGGTGCGCACCCGCACCGAGGTGGCACTGCGCGAGCGCGTACCGCACCGGCTGCTGCCGCTGGTGGAGTCGATCGGCCGCACGGCCGC
0no label
G000007145
ASM714v1
GCF_000007145.1
PRJNA57887
SAMN02603845
null
2002/05/24
Sao Paulo state (Brazil) Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1
637,000,344
RS_GCF_000007145.1
Monoisolate
Complete Genome
Full
reference genome
Major
190,485
339
Xanthomonas campestris pv. campestris str. ATCC 33913
strain=ATCC 33913
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas campestris
true
Xanthomonas campestris pv. campestris str. ATCC 33913
Eubacteria
Proteobacteria
1
1
0.9
1
5,076,188
1
65.07
5,076,188
1
4,292
1,472,146
85.453159
99.64
0
0
358
yes
yes
yes
20
high
1,607,190
ACATGCGACTGTGCAAGCGCTTCGACCAGGGCGAGCCGACCGAGCGCCTGCTCGCCTTGCGCGCGCGCGCCGTCGATCAATTGATGCGCAATGCGTGGACGCGCTGTATCCCCGCCGACGCCGGGCTGTCCTTGCATGCGGTGGGTGGCT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,746,500
ACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTT
11
G000008165
ASM816v1
GCF_000008165.1
PRJNA58091
SAMN02598266
null
2004/06/24
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/165/GCF_000008165.1_ASM816v1
637,000,015
RS_GCF_000008165.1
Monoisolate
Complete Genome
Full
reference genome
Major
260,799
1,392
Bacillus anthracis str. Sterne
strain=Sterne
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Sterne ASM816v1
Eubacteria
Firmicutes
1
1
1
1
5,228,663
1
35.38
5,228,663
1
5,471
1,495,624
84.251844
99.23
0.15
0
381
yes
yes
yes
20
high
4,788,550
GAAAAAAGTTGTTACGATGAATGAGATGACACAAACAGCTAAACAAATGAAACAAACAGTTGAAGAATTAGATCAACTCGTATCACACTTCAAAACTGAATAGCCTTTAAAAAATATCCCTCTTCCAAAAGGGATATTTTTTTGAGCTCA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,025,700
CTGTAAGATGGCTCTATGTGGGGCACGTGAGCTCGTGACTTTCCGGGTATGGGCGTGGCCTGCAGACAGGGATTTGAACAAGGGTAAGCATGTGGGTGAGGACATGAAGCCCCAAAGAGCATGAGACTGTGGGGAGGGGCAAGTCCCGTG
11
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Nitrosomonas europaea ATCC 19718
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
2,324,140
GACGAACAGCTGCTCAAACAGGCACTGAAGTGGTTCTTTCTATTACAGTCTGAACACTGTACGGATAAGGACAGGCGAAAATTCAACCGCTGGTTCTGTAAAAATGAAGCTCATCAGACAGCCTATGCGCATGCTGAACGCTTATGGTCT
0no label
G000006175
ASM617v2
GCF_000006175.1
PRJNA224116
SAMN00000040
null
2010/06/03
US DOE Joint Genome Institute (JGI-PGF)
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/175/GCF_000006175.1_ASM617v2
646,564,549
RS_GCF_000006175.1
Multispecies
Complete Genome
Full
representative genome
Major
456,320
2,188
Methanococcus voltae A3
strain=A3
null
Archaea
Euryarchaeota
Methanococci
Methanococcales
Methanococcaceae
Methanococcus
Methanococcus voltae
true
Methanococcus voltae A3
Archaea
Euryarchaeota
0.97
1
1
1
1,936,387
1
28.59
1,936,387
1
1,727
526,927
80.167033
99.05
0
0
165
no
yes
yes
19
medium
1,540,760
AAATTATATATAGTATCTAATTTCCAGAAAAAAAGCCCATTATATATCAAAGAGACTAATAACTATATTAAAATTAATAATATATATTATTTTATTTAAAATATTTCATAATGTCCCATTTTAAGTTTAAATTCGTTTTTTATTAAAAAT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,935,350
CCCACAGGACTGCCCACTGCTTCCACCCCAACACCGCCCCGGCCCTGGTGTCCTCCCGGCCATAGCAGCTTGCTGCTGGGCCTTGCCCTGCCCCCACCGCCCCGAGCGCTTGCCCTCCTCTCCCGGGATCGCCCCCAGGCCTCCGTGCCT
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,146,950
CTGGAACAGCACCCACACCCCCAGGCGAGCATCTAACAGCCTGAAGCAGCACCCCACACCCCCAGGTGAGCATCGGACAACCTGGAGCAGCACCCACACGCCCAGGTGAGCATCTGACAGCCTGGAACAGCACCCACACTCCCAGACGAG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,626,700
TGCCTGCATTCTGCTCAGGGCTCACAGCTGCATTCGGTGGAAGAGATGAGGGAAAAGTGTTTTCTCTGTTTACCCTCAGAGCTTGGTCTGGATGCAGATTTGCGTGACTTCAACATCCAGTTGTTCTCTGGAACCCTTGCCTCTTGTGTG
11
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Rothia mucilaginosa DY-18
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
1,818,830
AACGAGCGGTCGCTCTTGCGCTGCACGAGGGGCAGAACGGCCTTCAGGGTTGCGGCAACGTCAGCCTCAATCAGCAGGTCGACGTTGGTACGGCGGCCCAACACCTCGCCGGCACGGTCAATCTGAACGGTCTGCACGTTGGGCAGGAAC
0no label
G000007345
ASM734v1
GCF_000007345.1
PRJNA224116
SAMN03081414
null
2002/04/03
Broad Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1
638,154,508
RS_GCF_000007345.1
Monoisolate
Complete Genome
Full
representative genome
Major
188,937
2,214
Methanosarcina acetivorans C2A
strain=C2A
null
Archaea
Euryarchaeota
Methanomicrobia
Methanosarcinales
Methanosarcinaceae
Methanosarcina
Methanosarcina acetivorans
true
Methanosarcina acetivorans C2A
Archaea
Euryarchaeota
0.98
1
0.8
0.9
5,751,492
1
42.68
5,751,492
1
4,884
1,470,904
75.340086
99.84
0.03
0
229
no
yes
yes
18
medium
5,111,340
TTTACCTGCTTTATTAATGAAGACTCTTTTTAAGGTTGAGCTTTGTATCGATTACCAGTTAGACTAAGAGCAGCCAGTATTTTGGACGTTGGAGTTAACCATTTCTTACCGTCAATTCCAGCTGTTCTTTTTCCTTTATTTTGGGTTACT
0no label
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Idiomarina loihiensis L2TR
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
1,382,680
AGACCCGGTTTATTTGTGGGGCTCAGCAACAGACATCAACGACTCGAATATTGCTGTCGGACATTTAACCAAACGTCCCGCAGGAACGTTGCGAAGCTACGGCTTCTATTACGATGTTGATGCGAGTGAATTGACGATTCTTGACAGTTT
0no label
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Streptococcus agalactiae 2603V/R
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
804,180
TTCGTTTTACGAGCCAGAACTATTGCAACTTTCAGAGTCTGATTACCAGTCATTCCTTTTAGAAATGCCTGACTTGCAAAAATATGATCATTTCTTTGAGAAAATATTTGCAAATAAACCTCATGTCTTATCTCAAAACGAAGAAGAATT
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,007,250
ACCCTCTGCTCCCGCCGTGTGGACGAGTGGGTACTGAGTACAGGGGAGACCTCGGGGCATCAGGAAAGTCTTCCTCCTGGCCACCTATGTGGGACCACCAGAGCCAAAGGTTTTGAATTCATCACCACCCTTATGAGCCAAGTGACTCTG
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,365,150
TAGACGGAGTTTCACCATGTCAGCCAGACTGAACTCAAACTCCTGACCTCAGGCGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGCATTACAGGTGTGAGCCACCACGCCCAGCCTGCTCTAGGTTGTACAATGCACATCTTTTACTTA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,935,600
ACGCAGTTATTACGTAGTCACCACTGGTGGGAAAAAAGGATTCAGAACTTAATGAGTTTAAAACAACACATGAGAGACGCTGAGGCAGGTGTGAGCGAATGTTTCCACCGGGGCCTGACTTTCAGGCCGCTTCTCCTCGGCAGCTGCCTC
11
G000007845
ASM784v1
GCF_000007845.1
PRJNA57909
SAMN02603432
null
2003/04/30
J. Craig Venter Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/845/GCF_000007845.1_ASM784v1
637,000,014
RS_GCF_000007845.1
Monoisolate
Complete Genome
Full
reference genome
Major
198,094
1,392
Bacillus anthracis str. Ames
strain=Ames
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus anthracis
true
Bacillus anthracis str. Ames
Eubacteria
Firmicutes
1
1
1
1
5,227,293
1
35.38
5,227,293
1
5,474
1,495,110
84.244541
99.23
0.15
0
381
yes
yes
yes
20
high
2,968,680
GGAGATTCCCCAGCGGTCCATATGTTTTCGGTTGAGGAATGGCAGATACTTTTTTATCCATTACAAACACCCTTTCAAAAAGCATGAAATAAAGTGAAACTTTAATCAGTGGGGGTTTTCTTCATCCCCCACTGATTATTAGTTGAACCA
0no label
G000008465
ASM846v1
GCF_000008465.1
PRJNA224116
SAMN02604184
null
2004/12/02
University of Hawaii at Manoa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/465/GCF_000008465.1_ASM846v1
637,000,136
RS_GCF_000008465.1
Monoisolate
Complete Genome
Full
representative genome
Major
283,942
135,577
Idiomarina loihiensis L2TR
strain=L2TR
null
Bacteria
Proteobacteria
Gammaproteobacteria
Alteromonadales
Idiomarinaceae
Idiomarina
Idiomarina loihiensis
true
Idiomarina loihiensis L2TR
Eubacteria
Proteobacteria
1
1
1
1
2,839,318
1
47.04
2,839,318
1
2,658
892,961
92.667007
100
0.17
0
344
yes
yes
yes
20
high
1,174,810
GTACCGTTCTTAGGGTAAATAGCAACGCCAATGGATACACTAATTTCCAACTGTTGCTTTTTCACTTTATAAGGCTTGGCCAACTGCACAACCAATTTACGAGACACCGCCAGTGATGAACCGACACTGTTCGCTGTTGGCAGCAGGATA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,658,850
GGAAGGCCAAGGCGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCTGGTGTGATGGCGCATGTCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAT
11
G000007025
ASM702v1
GCF_000007025.1
PRJNA224116
SAMN02603141
null
2002/11/25
CNRS
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1
637,000,243
RS_GCF_000007025.1
Monoisolate
Complete Genome
Full
representative genome
Major
272,944
781
Rickettsia conorii str. Malish 7
strain=Malish 7
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rickettsiales
Rickettsiaceae
Rickettsia
Rickettsia conorii
true
Rickettsia conorii str. Malish 7
Eubacteria
Proteobacteria
1
1
0.9
1
1,268,755
1
32.44
1,268,755
1
1,435
347,621
80.686027
99.46
0.33
0
218
yes
yes
yes
20
high
450,060
CATGATCATAAAAAATCTTCAAGAATTTTATCGGCTTTTAATACCAAATGTTCCGCTTATCGCTATTGATTACGGAAACAAAAAATTAGGAATCGCATTATCTAATCAAGAACGTAGTATTGCTATGCCCTTAAATACTATAACCGAGAT
0no label
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,406,470
CCTAATCTGGATGTTTCCATTGGCTATACGTATCTGGATACCAAAGTTTCCAATTCCCGTGTCAGCGATTTTGGCGGCGTTTACTCCCCGCACCACATGTTCAAATCCTGGGTGCATTACACCGTGCCTGATGGACGTCTGAAAGACCTG
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,443,950
ATTGTCTGTTTTTAAAGCTCCACTGGGACAGGAGCCTAACCAAGTGCCTGGCACATCACAGACTCTCCGCAAGTCTTTGCTGAATGGAGAGTGGGTAGGAGAAAAGGAGGACCACCTGAACAAGCCCCATCTGAGTCAGCATGCCCTAAA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,201,250
AGCACCCACAACCCCAAGTGAGCATCTGATTGTCTGGAGCAGCACCCACAACCACAGGTGAGCATCGTAGAGTCTGGAGCAGCGCCCACAGCCCCACGCGAGCATCTGACAGCCCGGAGCAGTGACCACACCTCCAGGTGAGCATCTGAC
11
G000009345
ASM934v1
GCF_000009345.1
PRJNA57741
SAMEA1705958
null
2007/01/12
Sanger Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/345/GCF_000009345.1_ASM934v1
640,069,335
RS_GCF_000009345.1
Monoisolate
Complete Genome
Full
reference genome
Major
393,305
630
Yersinia enterocolitica subsp. enterocolitica 8081
strain=8081
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Yersiniaceae
Yersinia
Yersinia enterocolitica
true
Yersinia enterocolitica subsp. enterocolitica 8081
Eubacteria
Proteobacteria
1
0.998
0.9
1
4,683,620
2
47.22
4,615,899
1
4,253
1,352,606
85.086813
99.95
0
0
373
yes
yes
yes
20
high
4,094,610
GCCAATTCAGCTCATCTGCCATAATCACTGTTTATCCAGGGTTATCGGCTGTTTCGCGGCAATCAGCAATTGTTGAGTCAAACCATCCACACCTTTCTGACGCAAGATAGAAGCCCACTCATTTTGCTTGGTACTGATCATGCTAACCCC
0no label
G000007525
ASM752v1
GCF_000007525.1
PRJNA57939
SAMN02603675
null
2005/01/21
Nestle Research Center, Switzerland
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/525/GCF_000007525.1_ASM752v1
637,000,031
RS_GCF_000007525.1
Monoisolate
Complete Genome
Full
reference genome
Major
206,672
216,816
Bifidobacterium longum NCC2705
strain=NCC2705
null
Bacteria
Actinobacteria
Actinobacteria
Bifidobacteriales
Bifidobacteriaceae
Bifidobacterium
Bifidobacterium longum
true
Bifidobacterium longum NCC2705
Eubacteria
Actinobacteria
1
0.996
0.9
1
2,260,266
2
60.13
2,256,640
1
1,833
667,063
86.967994
100
0
0
289
yes
yes
yes
20
high
2,094,300
TAGGGCGGGGTGGCGCTGATGACCCTGCTTTCCGTACTCGATATTCTTCTGGTAATCGTCGGCGGTGCCGGCATGATATATCAGGGACTGTGCATCGTGATGTCCCTGTTCGCCAAGCCCGTGCGCTTCCCCGACGCCCCGATGACCAAC
0no label
G000006785
ASM678v2
GCF_000006785.2
PRJNA57845
SAMN02604089
null
2014/04/01
Univ. Oklahoma
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2
637,000,291
RS_GCF_000006785.2
Monoisolate
Complete Genome
Full
reference genome
Major
160,490
1,314
Streptococcus pyogenes M1 GAS
strain=SF370
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus pyogenes
true
Streptococcus pyogenes M1 GAS SF370
Eubacteria
Firmicutes
1
1
0.6
1
1,852,433
1
38.51
1,852,433
1
1,776
539,188
85.75128
100
0
0
277
yes
yes
yes
20
high
1,168,570
TGTCACTTTTGCGTGCATCACTAACCAACGGTGCTCTTTCTTGAACAATTGGGCTTCTGCTTGGCTTTTCAAACGGTAAAATAACTGATAAGAATGTTTCCCGTGACGTCCAAGAACAGCTAATTGATCACCATTAATCCGAATACTATC
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,043,350
TGGGTGCTTTACTACTGTTTCCTAACTGCAGCTGCAATCGCATCTACATTCAATCTGGCATCAGAAACTGGCCTCCCTCCAAGGCAGGACAACAGCCCCACAGACCAGGTTAAAATTCTGTCGCTTGCAAAACTGTCCCAGGTTCCAATC
11
G000006925
ASM692v2
GCF_000006925.2
PRJNA62907
SAMN02603599
null
2011/08/03
Microbial Genome Center of ChMPH
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2
637,000,264
RS_GCF_000006925.2
Monoisolate
Complete Genome
Full
reference genome
Major
198,214
623
Shigella flexneri 2a str. 301
strain=301
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Shigella
Shigella flexneri
true
Shigella flexneri 2a str. 301
Eubacteria
Proteobacteria
1
0.998
1
1
4,828,820
2
50.65
4,607,202
1
5,003
1,415,151
86.329724
99.7
0.21
0
372
yes
yes
yes
20
high
4,380,350
TACCGTCAGGTAATAGGGTGTCGGGTTAATCAGCGTCAGAGAATTCGCGCTACGACGAAATCTTAATTTTTCTGCGGCCTGATCGGGTGGCAACGCTAATTTAGCCGGGCGATAGTACAGTTTAATGCGGCTGATAATTGCGAGCTGTAG
0no label
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Vibrio vulnificus YJ016
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
1,263,860
GAACGAATCACAGACAGTGGATCGGGAACGTGCTCTAGCATTTCCATGCATGTCACGACATCGTACATTTGTGCATTTTCAGCCGCGTGATCTTCAATAGTGCTTTGGATATACGTGAGTTTGGTACCGGTTTCAAGAGCATGCAGACGA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
781,500
GGGGCGTCCGCGCTTACTGTTCCGGGGCTCGCGGGGCTGGAGGCCTTCCCGACCCGACCCCAGCAGGAAGCGCGGAGGCCACTAGAGGGCGGCCCAGGATGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTG
11
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Methylococcus capsulatus str. Bath
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
1,201,330
CTTTTTCACTGGCGGAGCTGTGGACATGAAACCGAAATGGCTCGACCCGAGGCAAGGCCGGTTTGTGAAGGATCGGCGGATGGCGGCGATGAGCGGCGCAGCCCAATGTTGTGTTCCGGTGGTCGCGTCTGTGTTCTTCCTCCTTGCGGG
0no label
G000007305
ASM730v1
GCF_000007305.1
PRJNA224116
SAMN02604284
null
2002/02/27
Utah Genome Center
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1
638,154,515
RS_GCF_000007305.1
Monoisolate
Complete Genome
Full
representative genome
Major
186,497
2,261
Pyrococcus furiosus DSM 3638
strain=DSM 3638
null
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Pyrococcus
Pyrococcus furiosus
true
Pyrococcus furiosus DSM 3638
Archaea
Euryarchaeota
1
1
0.9
0.9
1,908,256
1
40.77
1,908,256
1
2,102
594,193
91.722127
99.5
0
0
195
yes
yes
yes
19
high
1,791,660
TCCTAGACCTAGCAAATTTGTCTGGCATTATTTGATAGAATACCCTGTCAATAACCCAGGTTGGAAATTCGATACTGAAGGGTCTCGCCTTAAATTGACCATACTCAAATTTCGCTCCTTCCATTGTTAATACTTCAAATGAATAATTTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,480,550
CAACTTTGGCGTGGGGGTGTGCTGGTGCCTGGCCACTCCCATCGTGAATGGGGACACACCTGCCGCATCCCTTCCATACTAGTGACTGGACCTGCTCTGGGCAACAGCGGCCAGCAGAGACATCCACCCCAGCTCTGTCTGCTGGCCTGA
11
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,180,350
GCCTGCATCTGCGGGGCCTGGGAGTCATGGGGGAGGCAGCGATAGCGCTGGGGGTTCCTGGAGAGGATTTCCTCTGCCTTTTACCCTTCCCTTTGGGAAGGAGCTGCTGCCATGAGGAGCAGGCAGGGCAGGTTCCTGGAATCTCCAGGT
11
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Sulfolobus solfataricus P2
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
296,270
TCATTTTGACGAGCTATTTTTTTAATTGCCCTCTTGTTCCCTTGAAGTTTTTGTAATTCTTCTTTGGTTAAAATGGTGTTAGGTTCGGCTTTCTTTGCGTACTCTAGTTGCTGAATAGTTGGGACTACTAAAACTTTCTTTGTTTTTTCC
0no label
G000007705
ASM770v1
GCF_000007705.1
PRJNA224116
SAMN02603528
null
2003/08/22
LNCC, Brazil
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/705/GCF_000007705.1_ASM770v1
637,000,074
RS_GCF_000007705.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,365
536
Chromobacterium violaceum ATCC 12472
strain=ATCC 12472
null
Bacteria
Proteobacteria
Betaproteobacteria
Neisseriales
Chromobacteriaceae
Chromobacterium
Chromobacterium violaceum
true
Chromobacterium violaceum ATCC 12472
Eubacteria
Proteobacteria
1
1
0.9
1
4,751,080
1
64.83
4,751,080
1
4,298
1,428,392
88.582238
99.04
0.45
0
372
yes
yes
yes
20
high
3,696,940
GGGCGCCGACTGCATCGCCACCGGCCACTACGCGCGCAAGCTGGAACAGGACGGCACCCACTACCTGATGAAGGCGGTGGACCACACCAAGGACCAGAGCTACTTCCTGTACCGGCTGCAGCAGCATCAGCTGGCCAAGGCCATCTTCCC
0no label
G000007765
ASM776v1
GCF_000007765.1
PRJNA57631
SAMN02603970
null
2005/07/22
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/765/GCF_000007765.1_ASM776v1
637,000,086
RS_GCF_000007765.2
Monoisolate
Complete Genome
Full
reference genome
Major
227,377
777
Coxiella burnetii RSA 493
strain=RSA 493
null
Bacteria
Proteobacteria
Gammaproteobacteria
Legionellales
Coxiellaceae
Coxiella
Coxiella burnetii
true
Coxiella burnetii RSA 493 ASM776v1
Eubacteria
Proteobacteria
1
0.995
0.9
1
2,032,674
2
42.6
1,995,281
1
2,058
613,036
88.849515
100
0
0
308
yes
yes
yes
20
high
1,341,730
AACCGGTTTTAGCGATGGAAAAACAGACCGATCTTATTACCGCCGGCGAGAAAGAAGGAAAAAAGCTCCCAAATGTCGATTACGGTAATTCCCCGACAGAATTAATCGCAGGCACAAAAAAAGGAAAAATACTCGTTCTTTTATCAAGTA
0no label
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
homo sapiens
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,298,650
CTCTGCTTCCTCTCCCTCCTCTTCCTCCGGCTCTCTTCCTTCTCCGAGCCCTCGGCACGGCCCTTGCCCTTCCCGCCACCACGGCCTCCGACGCGCAGGTACTCCAGGATGGATCTGGTCTGGCAGCCGCTGACCATCTTCTCCAGGCGC
11