chrom
large_stringlengths 1
2
| pos
int64 10.4k
249M
| ref
large_stringlengths 1
1
| alt
large_stringlengths 1
1
| label
bool 2
classes | consequence
large_stringlengths 5
25
| GPN-MSA
float32 -12.11
10.7
| CADD
float32 -8.77
1.95
| phyloP-100v
float64 -9.89
15.7
⌀ | phyloP-241m
float64 -9.19
20
⌀ | phastCons-100v
float64 -1
-0
⌀ | NT
float32 -10.61
9.66
⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 923,421 | A | G | false | Promoter | -1.450195 | -0.579244 | -0.601 | -2.289 | -0.004 | 0.144211 |
1 | 924,024 | C | G | false | 5' UTR | -1.563477 | -0.915468 | 0.547 | 0.676 | -0 | 1.154572 |
1 | 924,305 | G | A | false | 5' UTR | -3.535156 | -1.268299 | -1.885 | -1.829 | -0.993 | -1.208542 |
1 | 924,310 | C | G | false | 5' UTR | 6.21875 | -1.450099 | -1.409 | -1.994 | -1 | 0.275757 |
1 | 924,321 | C | G | false | 5' UTR | 3.769531 | -1.022879 | 0.368 | -2.739 | -0.001 | 1.026062 |
1 | 940,390 | A | G | false | ncRNA | -3.466797 | -1.155244 | -0.088 | -1.597 | -0.03 | 1.721756 |
1 | 941,119 | A | G | false | ncRNA | 0.868652 | -0.696706 | 2.575 | -1.662 | -0.001 | 2.247543 |
1 | 944,296 | G | A | false | 3' UTR | -1.480469 | -0.151347 | 0.075 | 0.549 | -0 | 0.495117 |
1 | 944,307 | T | C | false | 3' UTR | 1.438477 | -0.169365 | 0.501 | -0.341 | -0 | 0.344604 |
1 | 954,258 | G | C | false | ncRNA | 1.378906 | 0.7164 | 2.208 | -0.024 | -0 | 0.408691 |
1 | 957,365 | G | A | false | ncRNA | -1.103516 | -0.070894 | 0.145 | -0.622 | -0 | 0.123932 |
1 | 958,339 | G | A | false | ncRNA | -0.427734 | -0.001602 | 1.424 | 0.413 | -0 | -0.774399 |
1 | 960,326 | G | A | false | Promoter | -1.845703 | -0.796816 | -0.526 | -0.107 | -0.587 | -2.819916 |
1 | 960,440 | G | C | false | Promoter | -3.224609 | -0.883029 | -1.169 | -0.133 | -0.074 | -5.852936 |
1 | 962,184 | T | C | false | ncRNA | -0.648926 | -0.06953 | 1.184 | 0.613 | -0 | 0.982025 |
1 | 965,350 | G | A | false | 3' UTR | -1.275391 | -0.179593 | 0.706 | 0.219 | -0 | -0.786041 |
1 | 965,592 | T | G | false | 3' UTR | 1.421875 | -0.333438 | 0.279 | -2.011 | -0 | 1.755936 |
1 | 965,643 | T | C | false | 3' UTR | -2.822266 | -0.909364 | -1.076 | -0.65 | -0.255 | -0.402863 |
1 | 966,426 | G | C | false | Promoter | 2.119141 | -0.785748 | -0.763 | 0.033 | -0.001 | -0.222748 |
1 | 975,014 | C | T | false | 3' UTR | 0.319824 | -0.148898 | 0.551 | 0.371 | -0 | -0.381516 |
1 | 975,029 | T | C | false | 3' UTR | -0.079102 | 0.082927 | 1.617 | 0.469 | -0 | -0.634766 |
1 | 975,093 | G | A | false | 3' UTR | 0.659668 | -0.130184 | -0.227 | -1.331 | -0 | 0.616119 |
1 | 975,523 | T | C | false | 3' UTR | -1.543945 | 0.411871 | 4.131 | 1.476 | -0 | -1.509323 |
1 | 981,169 | A | G | false | 5' UTR | 0.01001 | -0.283721 | 1.44 | -0.26 | -0 | -0.682312 |
1 | 982,260 | G | A | false | Promoter | -2.498047 | -0.421337 | -0.099 | -2.686 | -0.09 | -0.725525 |
1 | 982,890 | C | T | false | Promoter | -1.507813 | -0.095401 | 0.159 | -0.072 | -0 | -2.30661 |
1 | 983,193 | A | G | false | Enhancer | 0.341309 | -0.195271 | 1.357 | 0.628 | -0 | null |
1 | 983,237 | G | A | false | Enhancer | -0.63623 | -0.210166 | -0.574 | 0.209 | -0.03 | null |
1 | 984,039 | T | C | false | Enhancer | -0.025391 | -0.018227 | 1.5 | 2.992 | -0 | null |
1 | 984,109 | C | T | false | Enhancer | -0.075195 | 0.031933 | 0.787 | 1.334 | -0 | null |
1 | 984,121 | G | T | false | Enhancer | -1.629883 | -0.60963 | -0.799 | -0.875 | -0.005 | null |
1 | 984,630 | A | C | false | Enhancer | 0.212891 | -0.168875 | 0.295 | 3.677 | -0.004 | null |
1 | 985,123 | G | A | false | Enhancer | -1.046875 | -0.154577 | -0.205 | -0.133 | -0.065 | null |
1 | 985,268 | T | C | false | Enhancer | -1.094727 | -0.190716 | 2.089 | 1.352 | -0.006 | null |
1 | 985,312 | G | A | false | Enhancer | 1.390625 | 0.085419 | 2.035 | 1.427 | -0.001 | null |
1 | 985,597 | T | C | false | Enhancer | 0.03418 | -0.324777 | -0.246 | -0.11 | -0.008 | null |
1 | 986,336 | C | A | false | Enhancer | 0.464355 | -0.115757 | -0.167 | 1.131 | -0.002 | null |
1 | 986,629 | G | A | false | Enhancer | 1.074219 | 0.1537 | 1.143 | 1.372 | -0.001 | null |
1 | 987,103 | T | C | false | Enhancer | -0.380859 | -0.100897 | 1.556 | 1.327 | -0.012 | null |
1 | 987,696 | A | G | false | Enhancer | -1.370117 | -0.180671 | 1.409 | 1.361 | -0.011 | null |
1 | 988,369 | T | C | false | Enhancer | -1.160156 | -0.0194 | 1.488 | 3.817 | -0.006 | null |
1 | 988,731 | T | A | false | Enhancer | -1.396484 | -0.090198 | 3.02 | -0.1 | -0 | null |
1 | 988,912 | A | G | false | Enhancer | 1.367188 | -0.318621 | -0.997 | 1.65 | -0.012 | null |
1 | 989,223 | T | C | false | Enhancer | -0.928223 | -0.331982 | -0.285 | -0.1 | -0.001 | null |
1 | 989,518 | C | A | false | Enhancer | -1.470703 | -1.23001 | -0.95 | -0.156 | -0.934 | null |
1 | 990,304 | T | C | false | Enhancer | -0.197754 | -0.175068 | -0.186 | -0.1 | -0.028 | null |
1 | 990,971 | C | T | false | Enhancer | 1.107422 | -0.118064 | -0.178 | 1.817 | -0.026 | null |
1 | 991,051 | A | T | false | Enhancer | -0.17334 | -0.06713 | 1.01 | 1.593 | -0.005 | null |
1 | 991,241 | A | C | false | Enhancer | 1.135742 | -0.340666 | 0.988 | 0.933 | -0.098 | null |
1 | 991,588 | C | T | false | Enhancer | 1.289063 | 0.107731 | 1.075 | 1.273 | -0.003 | null |
1 | 992,361 | G | A | false | Enhancer | 0.268066 | 0.142045 | 1.209 | 1.252 | -0.01 | null |
1 | 993,036 | G | A | false | Enhancer | 0.335938 | 0.03967 | 2.545 | 1.512 | -0.001 | null |
1 | 993,140 | A | G | false | Enhancer | -0.725586 | -0.005279 | 2.123 | 2.341 | -0 | null |
1 | 993,198 | G | A | false | Enhancer | 3.039063 | 0.141324 | 1.853 | 1.235 | -0 | null |
1 | 993,456 | C | T | false | Enhancer | 1.109375 | -0.122429 | 0.777 | -0.404 | -0 | null |
1 | 993,810 | A | G | false | Enhancer | 1.316406 | -0.235364 | 0.271 | 0.436 | -0.003 | null |
1 | 993,936 | C | T | false | Enhancer | -0.37207 | -0.250088 | -0.207 | -0.404 | -0.017 | null |
1 | 993,941 | A | C | false | Enhancer | 0.54834 | -0.268866 | 0.976 | 1.311 | -0.006 | null |
1 | 993,947 | A | G | false | Enhancer | -1.1875 | -0.067791 | 2.976 | 4.269 | -0.001 | null |
1 | 995,982 | G | A | false | ncRNA | 0.256836 | -0.107696 | 0.39 | 1.562 | -0 | 1.175568 |
1 | 996,120 | C | T | false | ncRNA | 1.242188 | 0.049307 | 0.783 | 0.05 | -0 | 0.51239 |
1 | 996,128 | T | A | false | ncRNA | -1.669922 | -0.082125 | 0.742 | 0.08 | -0 | -1.809631 |
1 | 996,168 | G | T | false | ncRNA | -1.648438 | -0.118861 | -0.775 | 0.27 | -0.002 | -1.335617 |
1 | 996,350 | A | G | false | ncRNA | 0.005371 | -0.296491 | 0.146 | 1.977 | -0.001 | 4.451508 |
1 | 996,493 | A | G | false | ncRNA | -1.685547 | -0.325605 | 0.365 | -0.052 | -0 | -1.029694 |
1 | 996,567 | C | T | false | ncRNA | -1.822266 | -0.507019 | -0.041 | -0.063 | -0.035 | -5.317749 |
1 | 998,410 | G | A | false | Promoter | -0.745605 | -0.624614 | 0.526 | 0.178 | -0.007 | -2.320389 |
1 | 998,726 | A | G | false | Promoter | 0.207031 | -0.388993 | 1.759 | 0.298 | -0 | 1.523605 |
1 | 998,741 | G | A | false | Promoter | -0.691406 | -0.425995 | 0.905 | -0.466 | -0.235 | -1.970337 |
1 | 999,666 | G | A | false | ncRNA | -0.787109 | -0.595527 | -0.616 | -0.966 | -0.001 | -1.777405 |
1 | 1,000,112 | G | T | false | 5' UTR | -2.861328 | -0.926617 | -0.221 | 1.418 | -0.1 | -0.037903 |
1 | 1,000,291 | C | G | false | Promoter | -1.255859 | -0.469425 | 0.718 | -0.02 | -0 | -0.111145 |
1 | 1,000,453 | C | G | false | Promoter | 0.114258 | -0.07478 | 2.227 | 1.644 | -0 | -0.393082 |
1 | 1,000,731 | C | T | false | Promoter | -0.648438 | -0.447297 | 0.603 | -0.272 | -0 | -0.406631 |
1 | 1,000,814 | A | G | false | Promoter | -0.897949 | -0.953609 | -0.173 | 0.748 | -0.016 | 0.864197 |
1 | 1,000,830 | C | A | false | Promoter | 0.898438 | -0.458797 | 3.109 | 1.755 | -0 | -0.116272 |
1 | 1,012,158 | C | T | false | ncRNA | -0.19043 | 0.11271 | 0.672 | 0.183 | -0.001 | -3.168991 |
1 | 1,013,541 | T | C | false | 5' UTR | 0.073242 | -0.454751 | 0.966 | 0.747 | -0 | -0.528473 |
1 | 1,015,915 | C | T | false | Enhancer | 0.023926 | 0.235579 | 3.548 | 0.44 | -0 | null |
1 | 1,015,942 | C | T | false | Enhancer | 0.0625 | -0.176332 | 0.632 | 1.175 | -0.007 | null |
1 | 1,015,950 | G | A | false | Enhancer | -0.141113 | -0.040907 | 1.515 | 1.134 | -0 | null |
1 | 1,016,184 | A | G | false | Enhancer | -1.205078 | -0.029858 | 3.272 | 1.442 | -0 | null |
1 | 1,016,623 | G | A | false | Enhancer | 1.060547 | 0.116544 | 0.932 | -0.165 | -0.001 | null |
1 | 1,017,048 | G | A | false | Enhancer | 0.947266 | -0.258768 | 1.428 | 1.811 | -0.194 | null |
1 | 1,017,844 | C | T | false | Enhancer | 1.978516 | -0.001318 | -0 | 1.835 | -0.024 | null |
1 | 1,019,397 | C | A | false | Promoter | -1.522461 | -0.127694 | 1.653 | 5.953 | -0 | -1.350143 |
1 | 1,019,636 | A | G | false | Promoter | 1.529297 | -0.946117 | 0.746 | 0.044 | -0 | 2.395004 |
1 | 1,034,279 | G | A | false | 5' UTR | -3.519531 | -0.992874 | 0.7 | -2.027 | -0 | -2.014023 |
1 | 1,048,653 | C | T | false | ncRNA | -0.888672 | -0.169446 | 0.073 | -0.34 | -0 | -3.518906 |
1 | 1,048,681 | C | T | false | ncRNA | -0.252441 | -0.249262 | 3.502 | 0.656 | -0 | -1.176071 |
1 | 1,048,722 | G | A | false | ncRNA | 0.02832 | -0.089299 | -0.207 | 0.575 | -0.001 | -1.16629 |
1 | 1,052,636 | T | C | false | ncRNA | -2.572266 | -0.145547 | 0.49 | 1.663 | -0 | -0.091263 |
1 | 1,053,123 | A | T | false | ncRNA | -0.051514 | -0.009851 | 0.115 | 0.701 | -0 | 1.130066 |
1 | 1,055,000 | C | T | false | 3' UTR | -1.259766 | 0.206188 | 0.413 | -0.563 | -0.002 | -0.339783 |
1 | 1,055,037 | T | C | false | 3' UTR | -3.808594 | -1.138926 | -0.281 | -0.889 | -0.995 | -3.128052 |
1 | 1,055,137 | C | T | false | 3' UTR | -0.963379 | -0.460026 | -0.156 | 0.285 | -0.001 | 0.368484 |
1 | 1,055,153 | G | A | false | 3' UTR | 0.595215 | 0.50193 | 2.155 | 1.027 | -0 | -0.550903 |
1 | 1,055,393 | C | T | false | 3' UTR | -1.507813 | -0.421711 | 1.055 | -0.017 | -0 | -2.00972 |
1 | 1,055,426 | G | A | false | 3' UTR | -1.388672 | -0.177974 | 0.178 | 0.086 | -0.003 | -1.702316 |
1 | 1,055,563 | G | C | false | 3' UTR | -1.53418 | -0.412556 | 0.321 | -1.765 | -0 | -0.258636 |