hdallatorre commited on
Commit
44f8790
1 Parent(s): 71114f9

feat: Remove Random Probe from csv

Browse files
Files changed (1) hide show
  1. data/benchmark.csv +0 -18
data/benchmark.csv CHANGED
@@ -159,24 +159,6 @@ splice_sites_all,500M HR,"[0.9570148338448877, 0.9531849358180634, 0.95600207134
159
  splice_sites_all,2.5B MS,"[0.9685450383914522, 0.9695244000044373, 0.9725021070901814, 0.9750245384263294, 0.9715195925093421, 0.9755177220662611, 0.9760253769897069, 0.9735063278116963, 0.9725077800933613, 0.9705156901304868]","[0.979016976059549, 0.97968468233026, 0.9816664644718425, 0.9833445951135191, 0.9810124102087422, 0.9836801618912029, 0.984017531802513, 0.982340886752462, 0.9816731997851686, 0.980331890947403]","[0.9789999723434448, 0.9796666502952576, 0.9816666841506958, 0.9833333492279053, 0.9810000061988831, 0.9836666584014893, 0.9839999675750732, 0.9823333024978638, 0.9816666841506958, 0.9803333282470703]"
160
  splice_sites_all,500M 1000G,"[0.9555434782174108, 0.9515030130976456, 0.9525528681513142, 0.9510391519176475, 0.954559343617183, 0.9530354218081114, 0.9520311001905843, 0.9575078196791246, 0.9570006380006381, 0.9526290899881327]","[0.9703311629844201, 0.9676602225147827, 0.9683421360911585, 0.9673026602710341, 0.9696903948729196, 0.9686798620096576, 0.9679869572024681, 0.9716674436845069, 0.9713309796643131, 0.9683757306573927]","[0.9703333377838135, 0.9676666855812073, 0.9683333039283752, 0.9673333168029785, 0.9696666598320007, 0.968666672706604, 0.9679999947547913, 0.9716666340827942, 0.9713333249092102, 0.9683333039283752]"
161
  splice_sites_all,2.5B 1000G,"[0.9640281178968307, 0.9591689884898531, 0.9660049910386805, 0.966501933005799, 0.9670127324181326, 0.9630126797504257, 0.9620120252254735, 0.9645561066453523, 0.9605379419980783, 0.9646056301000606]","[0.9760183843025896, 0.9727391074799527, 0.9773267077802937, 0.9776679566258725, 0.9780077067415771, 0.9753431470910642, 0.9746555443334705, 0.976368210306069, 0.973658392587175, 0.9763761251024831]","[0.9760000109672546, 0.9726666808128357, 0.9773333072662354, 0.9776666760444641, 0.9779999852180481, 0.9753333330154419, 0.9746666550636292, 0.9763333201408386, 0.9736666679382324, 0.9763333201408386]"
162
- H4ac,Raw Probe,"[0.10866565873041267, 0.10931782035510934, 0.1306634187708739, 0.10657091361609165, 0.11469773624052387, 0.11873036700505372, 0.10606688177906498, 0.11318058749244952, 0.1119632341833715, 0.11439362202247433]","[0.5402161856072296, 0.5387897993477917, 0.5495487106651517, 0.5348976022030474, 0.5399709773540639, 0.5446485045631155, 0.538841109928013, 0.5406595704315168, 0.5420988210924544, 0.5410043054621321]","[0.5653958944281525, 0.5659824046920822, 0.5756598240469208, 0.5651026392961876, 0.5686217008797654, 0.5700879765395894, 0.5642228739002932, 0.567741935483871, 0.5668621700879766, 0.5683284457478006]"
163
- H3K36me3,Raw Probe,"[0.051093067610619713, 0.049714043848319324, 0.05522647209923756, 0.05418268330449258, 0.04906170553559733, 0.03986256940018924, 0.05406037360995263, 0.043740769313775275, 0.05280754692328345, 0.0641092708788372]","[0.4931950446809934, 0.4925575541711581, 0.49690410858429296, 0.49365729858299545, 0.4887750194171063, 0.4827175594525225, 0.4968637698405448, 0.49469491948539157, 0.4948490313844285, 0.4989469437594908]","[0.544151376146789, 0.5435779816513762, 0.5455848623853211, 0.5455848623853211, 0.5438646788990825, 0.5404243119266054, 0.5450114678899083, 0.5401376146788991, 0.5447247706422018, 0.549598623853211]"
164
- splice_sites_donors,Raw Probe,"[0.5048856835393529, 0.3943989866544548, 0.5046177086333308, 0.5145859192969946, 0.502916743574915, 0.3893232424884123, 0.39119840954656837, 0.39355308677877093, 0.5071227735713032, 0.3910152576931252]","[0.7326451267779642, 0.6872284159978508, 0.7313104105124522, 0.7359028718358989, 0.7296184397923855, 0.6842529719576236, 0.685176208881724, 0.6867331091157807, 0.7314061339746165, 0.6852457501847746]","[0.7393084622383985, 0.6915377616014559, 0.7383985441310282, 0.7429481346678799, 0.7370336669699727, 0.6888080072793449, 0.6897179253867152, 0.6910828025477707, 0.7388535031847133, 0.6897179253867152]"
165
- splice_sites_acceptors,Raw Probe,"[0.3675974870595371, 0.3731228588346502, 0.3764782744323563, 0.3690981742724659, 0.3729961312091159, 0.3823071119535078, 0.3625760356849814, 0.38129768724533347, 0.3667975225423397, 0.36317991873018945]","[0.6772006393727306, 0.6799362271746566, 0.6810225338058522, 0.6773718618036304, 0.679997533756705, 0.6827460611501747, 0.6742100325861557, 0.6832085890782645, 0.6757726542014205, 0.6748265343574549]","[0.6807935076645627, 0.6834986474301172, 0.6848512173128944, 0.6812443642921551, 0.6834986474301172, 0.6871055004508566, 0.6780883678990082, 0.6871055004508566, 0.6798917944093779, 0.6785392245266005]"
166
- H3,Raw Probe,"[0.30069352784063247, 0.2926703888837226, 0.2884436724946782, 0.29509875472682484, 0.293950979590946, 0.29509875472682484, 0.29530663817032854, 0.28311908333420205, 0.29662574643235234, 0.2937717999743699]","[0.6503325260051817, 0.6463210444679561, 0.6441066066066066, 0.6473961622573252, 0.6469465785242092, 0.6473961622573252, 0.6476298778012168, 0.6414666056593792, 0.6482839020904057, 0.6467458731242693]","[0.6506346025384101, 0.6466265865063461, 0.644622578490314, 0.6479625918503674, 0.6472945891783567, 0.6479625918503674, 0.6479625918503674, 0.6419505678022712, 0.648630594522378, 0.6472945891783567]"
167
- H4,Raw Probe,"[0.15125345724498454, 0.14679977483393153, 0.15627595033414596, 0.14852763276801792, 0.15286032127179022, 0.13954957535475163, 0.14476096057534021, 0.14339228272020083, 0.16346593037901905, 0.15215121428029002]","[0.5702766628966528, 0.5650874056023452, 0.5705467372134039, 0.5662390449622757, 0.5698854602600428, 0.5616201960983013, 0.5650619844486854, 0.5644812014515568, 0.5755658062616548, 0.568800396147905]","[0.5886379192334018, 0.5879534565366188, 0.5920602327173169, 0.5886379192334018, 0.5900068446269678, 0.5845311430527036, 0.5865845311430528, 0.5859000684462696, 0.594798083504449, 0.5900068446269678]"
168
- H3K4me3,Raw Probe,"[0.06288935045183028, 0.05958592710174532, 0.05960973230728557, 0.05664773390716779, 0.07103117404417161, 0.06345321071573364, 0.06610283488555242, 0.06605091861132663, 0.06190051858648302, 0.05182676065252284]","[0.5038520801232665, 0.49908807828462365, 0.5017913512656201, 0.49873379378222216, 0.5040946358991714, 0.5010471881060117, 0.5027558486919446, 0.5054112296203791, 0.49904320363427046, 0.49265989253427755]","[0.5434782608695652, 0.5423913043478261, 0.5421195652173914, 0.5410326086956522, 0.5472826086956522, 0.5440217391304348, 0.5451086956521739, 0.5448369565217391, 0.5434782608695652, 0.5394021739130435]"
169
- splice_sites_all,Raw Probe,"[0.4545483696874318, 0.4621136223264493, 0.46072954970934915, 0.4564236011927762, 0.46349019078507514, 0.4573597218262033, 0.45800815081639135, 0.45833826248359927, 0.45943065056954363, 0.4538216773384176]","[0.6313212486050753, 0.6366290290911117, 0.6353974999523434, 0.6328880521829157, 0.6368570449409167, 0.6330316085853345, 0.6335704219340926, 0.6336101095724401, 0.6347478874702812, 0.6312622205335118]","[0.633, 0.638, 0.637, 0.6343333333333333, 0.6386666666666667, 0.6346666666666667, 0.635, 0.6353333333333333, 0.6363333333333333, 0.6326666666666667]"
170
- H3K4me1,Raw Probe,"[0.05461277454472994, 0.05181050728330564, 0.05945628501477313, 0.03828676347053207, 0.06028369763299256, 0.0655630982179126, 0.052304484876277466, 0.042430287313293374, 0.06653383356941298, 0.04071620487289693]","[0.4824183112570688, 0.48010288138573126, 0.4896231835490724, 0.47516418807917205, 0.48175946628761745, 0.4853296464819217, 0.4841679529068269, 0.47280836051387864, 0.48637566137566135, 0.47412240020439567]","[0.5495580808080808, 0.5486111111111112, 0.5508207070707071, 0.5432449494949495, 0.5520833333333334, 0.5539772727272727, 0.5482954545454546, 0.5454545454545454, 0.5542929292929293, 0.5445075757575758]"
171
- H3K14ac,Raw Probe,"[0.01149757871318346, 0.004578887267509288, 0.015356665855811918, 0.0143083533467383, 0.01811264246331139, 0.006938891084420369, 0.016870060162067123, 0.009403340382709733, 0.008777838247762454, 0.02436679850295242]","[0.4120652190616692, 0.4105942593951569, 0.42036758193949475, 0.41158933832558886, 0.4165550024645033, 0.40963239460911127, 0.4124043115412044, 0.4086515318277632, 0.41253130878058064, 0.4188123427368388]","[0.562178517397882, 0.5603630862329804, 0.5618759455370651, 0.5630862329803328, 0.5633888048411497, 0.5612708018154312, 0.5636913767019667, 0.562178517397882, 0.5612708018154312, 0.5649016641452345]"
172
- enhancers_types,Raw Probe,"[0.2650038699462603, 0.25726361209758863, 0.26610539492486956, 0.26282013148434025, 0.26390880838588443, 0.26390880838588443, 0.25834659733141535, 0.2605312307910492, 0.25834659733141535, 0.26282013148434025]","[0.38990400280722864, 0.38697318007662834, 0.38992954689639053, 0.38925856176326984, 0.3892828472036393, 0.3892828472036393, 0.3869986747576201, 0.3876593338958931, 0.3869986747576201, 0.38925856176326984]","[0.525, 0.5225, 0.525, 0.525, 0.525, 0.525, 0.5225, 0.5225, 0.5225, 0.525]"
173
- promoter_no_tata,Raw Probe,"[0.34069819191774425, 0.3398233822374086, 0.11385405759262472, 0.33985851954073726, 0.3421202167118872, 0.3414246667566987, 0.33989948850679597, 0.3413697496854872, 0.3428660502262866, 0.33721134957647103]","[0.6699990606899455, 0.6697626757659859, 0.54733936360907, 0.6697137174698098, 0.6708532030595593, 0.67040693008553, 0.6696659220566421, 0.6704690891851446, 0.6712434409022572, 0.6683950667967848]","[0.6703151538026043, 0.6699377240988866, 0.554066805057558, 0.6699377240988866, 0.6710700132100397, 0.670692583506322, 0.6699377240988866, 0.670692583506322, 0.6714474429137574, 0.6686167201358747]"
174
- H3K79me3,Raw Probe,"[0.06881846618261324, 0.085567218463403, 0.07463693596367388, 0.06747518857809215, 0.07892949523366255, 0.08178016525360339, 0.08421753640518642, 0.08011596390682042, 0.08568711605648935, 0.08798378172320255]","[0.5150915849701764, 0.525474979916794, 0.5166179361329255, 0.5150574181908899, 0.5203290809642342, 0.5237212547724351, 0.5224778517642331, 0.5194801794007482, 0.5228669880578474, 0.5238881856442738]","[0.5447295423023578, 0.5520110957004161, 0.54750346740638, 0.5440360610263523, 0.5492371705963939, 0.5502773925104022, 0.5516643550624133, 0.5499306518723994, 0.5523578363384188, 0.5533980582524272]"
175
- H3K4me2,Raw Probe,"[0.09208002699840019, 0.07924110524904135, 0.08420980683315143, 0.08826929276698786, 0.09780546299685874, 0.08159140042056738, 0.08764851196692192, 0.07866864265710209, 0.06905117372073051, 0.098305527721868]","[0.5029364542842657, 0.4992807222140372, 0.4959689220630191, 0.4982958672942136, 0.5030305177626606, 0.493718880785165, 0.4956491629710631, 0.49354569572678364, 0.4900067980965329, 0.5040754080122192]","[0.5953079178885631, 0.5900944933202997, 0.5933528836754643, 0.5946562398175301, 0.5979146301726946, 0.5927012056044314, 0.5949820788530465, 0.5913978494623656, 0.5878136200716846, 0.5979146301726946]"
176
- promoter_tata,Raw Probe,"[0.2822965164231995, 0.30069845467448375, 0.3007951681771127, 0.30834594421751677, 0.2897213159327908, 0.3139122497007943, 0.3074559704155655, 0.29888504662728427, 0.3171511873399861, 0.3009049270932781]","[0.6405393442064762, 0.6482346525027862, 0.6485198689007936, 0.6535514946424409, 0.6446560846560847, 0.6550590341305464, 0.652064235266266, 0.6490056520828972, 0.6565554946907128, 0.6487972327805032]","[0.644122383252818, 0.6537842190016103, 0.6537842190016103, 0.6570048309178744, 0.6473429951690821, 0.6602254428341385, 0.6570048309178744, 0.6521739130434783, 0.6618357487922706, 0.6537842190016103]"
177
- enhancers,Raw Probe,"[0.3808775370892692, 0.3863097476970662, 0.39253540712041146, 0.3972360153788916, 0.3808775370892692, 0.3870504765230226, 0.3964757936890943, 0.4019380452620016, 0.3972360153788916, 0.39035031043700513]","[0.6850889623681311, 0.6874684948079444, 0.689548773023555, 0.6922223063144883, 0.6850889623681311, 0.6871767703524307, 0.6925093255368484, 0.6948893974065599, 0.6922223063144883, 0.6903927355563806]","[0.6875, 0.69, 0.6925, 0.695, 0.6875, 0.69, 0.695, 0.6975, 0.695, 0.6925]"
178
- H3K9ac,Raw Probe,"[0.13500441706177088, 0.12294342998614625, 0.14085732794250186, 0.13358067494678472, 0.14668526601613202, 0.12781098608486474, 0.1391279654912967, 0.13138330577799948, 0.1324388435608899, 0.14096955009033604]","[0.556215680495671, 0.5509270267850525, 0.5596359350704658, 0.5567892592836595, 0.5630350133103175, 0.5535492660943953, 0.5585435057440885, 0.55588619670812, 0.5546469445330162, 0.5609341635633074]","[0.5829435048578625, 0.577186038143217, 0.58546239654552, 0.5818639798488665, 0.5879812882331774, 0.5793450881612091, 0.5847427132061893, 0.5807844548398705, 0.5818639798488665, 0.5851025548758546]"
179
- promoter_all,Raw Probe,"[0.3130024989721436, 0.31439084349747104, 0.315758651371212, 0.3165407414533545, 0.31617878194657517, 0.3178376498806004, 0.31236251547490673, 0.3151069272755602, 0.31856015764924306, 0.3161339586009013]","[0.6563285451250878, 0.6569846226494045, 0.6576520723976218, 0.6579328502288027, 0.6577766920977104, 0.6586388096935343, 0.6559707840956588, 0.6573008537335601, 0.6589520630006427, 0.6578009187480138]","[0.6564189189189189, 0.6570945945945946, 0.6577702702702702, 0.6581081081081082, 0.6579391891891891, 0.6587837837837838, 0.6560810810810811, 0.6574324324324324, 0.6591216216216216, 0.6579391891891891]"
180
  H3K9ac,500M MS v2,"[0.573766807489114, 0.5683157745145635, 0.5378943359695679, 0.5663956462619734, 0.5779327541420388, 0.5695224232630202, 0.5660509749068477, 0.5388786560184979, 0.5486193592362518, 0.5748918656285118]","[0.7865352625466872, 0.781205584469365, 0.7682366556755924, 0.7830243432392147, 0.7873295809881176, 0.7830287189940536, 0.7815020923206515, 0.7680621265698907, 0.7682740599774605, 0.7832257393902975]","[0.788184404373169, 0.7817002534866333, 0.7726945281028748, 0.7849423289299011, 0.788184404373169, 0.7838616371154785, 0.7824207544326782, 0.7690922021865845, 0.7683717608451843, 0.7835014462471008]"
181
  enhancers,500M MS v2,"[0.5802611763072354, 0.5131137862772546, 0.5651766453068016, 0.5650635732281833, 0.5956033539986753, 0.5527707983925666, 0.4511841250505644, 0.5302386611083357, 0.5807263622132403, 0.5455526519819799]","[0.7899527393663575, 0.754256626294541, 0.7824660103141117, 0.7824877649367777, 0.7973974324501779, 0.7744360902255639, 0.7205983223313679, 0.7649471131004477, 0.7898686679174485, 0.7723847697897059]","[0.7899999618530273, 0.7549999952316284, 0.7824999690055847, 0.7824999690055847, 0.79749995470047, 0.7749999761581421, 0.7224999666213989, 0.7649999856948853, 0.7899999618530273, 0.7724999785423279]"
182
  H3K4me2,500M MS v2,"[0.3014306738075383, 0.3194557862477157, 0.3138230590089637, 0.32782907313012233, 0.32848093707763387, 0.2967507448473743, 0.32183321297351064, 0.319592980354341, 0.3179949766668607, 0.3421091680968514]","[0.6505877559219683, 0.6387010678715332, 0.6550512276930228, 0.6639138664909002, 0.6617311969826127, 0.6472636696394589, 0.6560151030852672, 0.6597637598219332, 0.6544719856342767, 0.6547727813702438]","[0.6605744361877441, 0.6387075781822205, 0.6609007716178894, 0.6752610802650452, 0.6814621686935425, 0.6543734073638916, 0.6592689156532288, 0.6719974279403687, 0.6579634547233582, 0.6550261378288269]"
 
159
  splice_sites_all,2.5B MS,"[0.9685450383914522, 0.9695244000044373, 0.9725021070901814, 0.9750245384263294, 0.9715195925093421, 0.9755177220662611, 0.9760253769897069, 0.9735063278116963, 0.9725077800933613, 0.9705156901304868]","[0.979016976059549, 0.97968468233026, 0.9816664644718425, 0.9833445951135191, 0.9810124102087422, 0.9836801618912029, 0.984017531802513, 0.982340886752462, 0.9816731997851686, 0.980331890947403]","[0.9789999723434448, 0.9796666502952576, 0.9816666841506958, 0.9833333492279053, 0.9810000061988831, 0.9836666584014893, 0.9839999675750732, 0.9823333024978638, 0.9816666841506958, 0.9803333282470703]"
160
  splice_sites_all,500M 1000G,"[0.9555434782174108, 0.9515030130976456, 0.9525528681513142, 0.9510391519176475, 0.954559343617183, 0.9530354218081114, 0.9520311001905843, 0.9575078196791246, 0.9570006380006381, 0.9526290899881327]","[0.9703311629844201, 0.9676602225147827, 0.9683421360911585, 0.9673026602710341, 0.9696903948729196, 0.9686798620096576, 0.9679869572024681, 0.9716674436845069, 0.9713309796643131, 0.9683757306573927]","[0.9703333377838135, 0.9676666855812073, 0.9683333039283752, 0.9673333168029785, 0.9696666598320007, 0.968666672706604, 0.9679999947547913, 0.9716666340827942, 0.9713333249092102, 0.9683333039283752]"
161
  splice_sites_all,2.5B 1000G,"[0.9640281178968307, 0.9591689884898531, 0.9660049910386805, 0.966501933005799, 0.9670127324181326, 0.9630126797504257, 0.9620120252254735, 0.9645561066453523, 0.9605379419980783, 0.9646056301000606]","[0.9760183843025896, 0.9727391074799527, 0.9773267077802937, 0.9776679566258725, 0.9780077067415771, 0.9753431470910642, 0.9746555443334705, 0.976368210306069, 0.973658392587175, 0.9763761251024831]","[0.9760000109672546, 0.9726666808128357, 0.9773333072662354, 0.9776666760444641, 0.9779999852180481, 0.9753333330154419, 0.9746666550636292, 0.9763333201408386, 0.9736666679382324, 0.9763333201408386]"
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
162
  H3K9ac,500M MS v2,"[0.573766807489114, 0.5683157745145635, 0.5378943359695679, 0.5663956462619734, 0.5779327541420388, 0.5695224232630202, 0.5660509749068477, 0.5388786560184979, 0.5486193592362518, 0.5748918656285118]","[0.7865352625466872, 0.781205584469365, 0.7682366556755924, 0.7830243432392147, 0.7873295809881176, 0.7830287189940536, 0.7815020923206515, 0.7680621265698907, 0.7682740599774605, 0.7832257393902975]","[0.788184404373169, 0.7817002534866333, 0.7726945281028748, 0.7849423289299011, 0.788184404373169, 0.7838616371154785, 0.7824207544326782, 0.7690922021865845, 0.7683717608451843, 0.7835014462471008]"
163
  enhancers,500M MS v2,"[0.5802611763072354, 0.5131137862772546, 0.5651766453068016, 0.5650635732281833, 0.5956033539986753, 0.5527707983925666, 0.4511841250505644, 0.5302386611083357, 0.5807263622132403, 0.5455526519819799]","[0.7899527393663575, 0.754256626294541, 0.7824660103141117, 0.7824877649367777, 0.7973974324501779, 0.7744360902255639, 0.7205983223313679, 0.7649471131004477, 0.7898686679174485, 0.7723847697897059]","[0.7899999618530273, 0.7549999952316284, 0.7824999690055847, 0.7824999690055847, 0.79749995470047, 0.7749999761581421, 0.7224999666213989, 0.7649999856948853, 0.7899999618530273, 0.7724999785423279]"
164
  H3K4me2,500M MS v2,"[0.3014306738075383, 0.3194557862477157, 0.3138230590089637, 0.32782907313012233, 0.32848093707763387, 0.2967507448473743, 0.32183321297351064, 0.319592980354341, 0.3179949766668607, 0.3421091680968514]","[0.6505877559219683, 0.6387010678715332, 0.6550512276930228, 0.6639138664909002, 0.6617311969826127, 0.6472636696394589, 0.6560151030852672, 0.6597637598219332, 0.6544719856342767, 0.6547727813702438]","[0.6605744361877441, 0.6387075781822205, 0.6609007716178894, 0.6752610802650452, 0.6814621686935425, 0.6543734073638916, 0.6592689156532288, 0.6719974279403687, 0.6579634547233582, 0.6550261378288269]"