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nucleotide_transformer_benchmark

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hdallatorre commited on 10 days ago

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c571dab

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1 Parent(s): 1bd1754

feat: Adjust last settings

Files changed (1) hide show

app.py CHANGED Viewed

@@ -9,16 +9,16 @@ _METRICS = ["MCC", "F1", "ACC"]
 _AGGREGATION_METHODS = ["mean", "max", "min", "median"]
 _TASKS = {
     "histone_marks": [
-        "H4",
-        "H3",
-        "H3K14ac",
         "H3K4me1",
-        "H3K4me3",
         "H3K4me2",
-        "H3K36me3",
-        "H4ac",
-        "H3K79me3",
         "H3K9ac",
     ],
     "regulatory_elements": [
         "promoter_no_tata",

 _AGGREGATION_METHODS = ["mean", "max", "min", "median"]
 _TASKS = {
     "histone_marks": [
+        "H2AFZ",
+        "H3K27ac",
+        "H3K27me3",
+        "H3K36me3",
         "H3K4me1",
         "H3K4me2",
+        "H3K4me3",
         "H3K9ac",
+        "H3K9me3",
+        "H4K20me1",
     ],
     "regulatory_elements": [
         "promoter_no_tata",