Sample name,Paper identifier,Organism,Protocol,Cell type,Treatment,Replicate,Read depth,QC score ERR769522,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),DRB (30min),1,20M,4 ERR769523,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),KM05283 (30min),1,23M,4 ERR769524,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,24M,2 ERR769525,Laitem2015cdk9,H. sapiens,GRO-seq,HeLa (cell line),NaN,2,26M,2 SRM497904,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol,1,40M,3 SRM497907,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol,2,49M,2 SRM497911,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,41M,2 SRM497912,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,52M,3 SRM497914,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,46M,2 SRM497917,Hah2013enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,38M,2 SRR064994,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,6M,4 SRR065240,Escoubet-lozach2011mechanisms,M. musculus,GRO-seq,peritoneal macrophage (primary),DMSO (1hr),1,8M,4 SRR065241,Escoubet-lozach2011mechanisms,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 SRR073010,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),NaN,2,11M,4 SRR091798,Ji2011transcriptional,M. musculus,GRO-seq,C2C12 (cell line),NaN,1,17M,2 SRR097862,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),NaN,3,8M,4 SRR097863,Min2011regulating,M. musculus,GRO-seq,MEF (primary),NaN,1,8M,4 SRR097864,Min2011regulating,M. musculus,GRO-seq,MEF (primary),NaN,2,7M,4 SRR10063517,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),growth media (6hr),1,19M,2 SRR10063518,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),growth media (6hr),2,9M,4 SRR10063519,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),hypoxia (6hr),1,18M,2 SRR10063520,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),hypoxia (6hr),2,8M,4 SRR10063521,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),oxPAPC (6hr),1,15M,3 SRR10063522,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),oxPAPC (6hr),2,11M,3 SRR10063523,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",1,16M,2 SRR10063524,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HAEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",2,16M,2 SRR10063525,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),growth media (6hr),1,19M,2 SRR10063526,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),growth media (6hr),2,15M,2 SRR10063527,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),1,15M,3 SRR10063528,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),2,17M,2 SRR10063529,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (6hr),3,13M,3 SRR10063530,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),1,99M,4 SRR10063531,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),2,14M,3 SRR10063532,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),3,12M,3 SRR10063533,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",1,51M,4 SRR10063534,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",2,16M,2 SRR10063535,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),"hypoxia (6hr) , oxPAPC (6hr)",3,14M,3 SRR10063536,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),growth media (6hr),1,14M,3 SRR10063537,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),growth media (6hr),2,23M,2 SRR10063540,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),oxPAPC (6hr),1,17M,2 SRR10063541,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HASM (primary),oxPAPC (6hr),2,7M,4 SRR10063544,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),growth media (6hr),1,19M,2 SRR10063545,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),growth media (6hr),2,26M,2 SRR10063548,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,CD14+ macrophage (primary),oxPAPC (6hr),1,18M,2 SRR10067473,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),NaN,1,41M,2 SRR10067474,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),NaN,2,23M,1 SRR10067475,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),JQ1 (2hr),1,29M,2 SRR10067476,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),JQ1 (2hr),2,15M,2 SRR10067477,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (2hr),1,51M,2 SRR10067478,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (2hr),2,10M,3 SRR10067479,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (6hr),1,30M,1 SRR10067480,Kelly2020unpublished,M. musculus,PRO-seq,ESC (cell line),LBH589 (6hr),2,42M,2 SRR1015583,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),NaN,1,22M,1 SRR1015584,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),NaN,2,23M,1 SRR1015585,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (10min),1,21M,1 SRR1015586,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (10min),2,18M,2 SRR1015587,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (30min),1,16M,2 SRR1015588,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (30min),2,21M,1 SRR1015589,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (2hr),1,20M,2 SRR1015590,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),TNF-alpha (2hr),2,24M,1 SRR1015591,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),DMSO (15min),1,77M,1 SRR1015592,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),DMSO (15min),2,55M,1 SRR1015593,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),NaN,1,130M,3 SRR1015594,Luo2014dynamic,H. sapiens,GRO-seq,AC16 (cell line),NaN,2,154M,4 SRR10282967,Komarov2020epigenetic,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,25M,3 SRR10282968,Komarov2020epigenetic,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,23M,3 SRR10298307,Li2021comprehensive,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,64M,2 SRR10298308,Li2021comprehensive,H. sapiens,GRO-seq,MCF7 (cell line),NaN,2,49M,1 SRR10298309,Li2021comprehensive,H. sapiens,GRO-seq,MDA-MB-231 (cell line),NaN,1,59M,1 SRR10298310,Li2021comprehensive,H. sapiens,GRO-seq,MDA-MB-231 (cell line),NaN,2,115M,2 SRR10312745,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2 BAC (4day)",1,28M,2 SRR10312746,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2 BAC (4day) , dTag7 (6hr)",1,29M,3 SRR10312747,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2F BAC (4day)",1,29M,2 SRR10312748,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2F BAC (4day) , dTag7 (6hr)",1,25M,3 SRR10312749,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2 BAC (4day) , flavopiridol (1hr)",1,27M,3 SRR10312750,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2 BAC (4day) , dTag7 (6hr) , flavopiridol (1hr)",1,28M,3 SRR10312751,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain Towne IE2F BAC (4day) , flavopiridol (1hr)",1,28M,3 SRR10312752,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain Towne IE2F BAC (4day) , dTag7 (6hr) , flavopiridol (1hr)",1,31M,3 SRR10312753,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day)",1,38M,4 SRR10312754,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr)",1,43M,3 SRR10312755,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day) , flavopiridol (1hr)",1,40M,3 SRR10312756,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr) , flavopiridol (1hr)",1,36M,4 SRR10312757,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day)",2,38M,4 SRR10312758,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr)",2,26M,5 SRR10312759,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (6hr) , HCMV strain TB40/E IE2F (3day) , phosphonoformic acid (6hr)",1,42M,3 SRR10312760,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2F (3day) , dTag7 (6hr) , phosphonoformic acid (6hr)",1,39M,4 SRR10312761,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),HCMV strain TB40/E IE2 (1day),1,36M,3 SRR10312762,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),HCMV strain TB40/E IE2 (3day),1,33M,3 SRR10312763,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2 (3day) , phosphonoformic acid (3day)",1,24M,4 SRR10354624,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),1,77M,1 SRR10354625,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),2,67M,1 SRR10354626,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),1,74M,2 SRR10354627,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),2,83M,1 SRR10354653,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,57M,1 SRR10354654,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,60M,1 SRR10354655,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",1,63M,1 SRR10354656,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",2,69M,1 SRR10354657,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min)",1,59M,2 SRR10354658,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min)",2,55M,1 SRR10354659,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min) , dTAG7 (2hr)",1,58M,1 SRR10354660,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , NVP2 (30min) , dTAG7 (2hr)",2,59M,1 SRR1035898,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),NaN,1,17M,2 SRR1035899,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A165 (2hr),1,18M,2 SRR1035900,Kaikkonen2014control,H. sapiens,GRO-seq,HAEC (primary),NaN,1,22M,2 SRR1035901,Kaikkonen2014control,H. sapiens,GRO-seq,HAEC (primary),VEGF-A165 (2hr),1,15M,2 SRR10400216,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"vehicle (22hr) , vehicle (6hr)",1,37M,1 SRR10400217,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"vehicle (22hr) , vehicle (6hr)",2,23M,1 SRR10400218,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"hydroxytamoxifen (6hr) , vehicle (22hr)",1,26M,1 SRR10400219,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"hydroxytamoxifen (6hr) , vehicle (22hr)",2,25M,1 SRR10400220,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , vehicle (6hr)",1,38M,1 SRR10400221,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , vehicle (6hr)",2,28M,1 SRR10400222,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , hydroxytamoxifen (6hr)",1,28M,1 SRR10400223,Wang2020proapoptotic,H. sapiens,GRO-seq,MCF7 (cell line),"doxycycline (22hr) , hydroxytamoxifen (6hr)",2,32M,1 SRR1041870,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),NaN,1,142M,5 SRR1041871,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),influenza virus strain PR8-delta-NS1 (4hr),1,130M,5 SRR1041872,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),NaN,1,159M,5 SRR1041873,Miller2015senataxin,H. sapiens,GRO-seq,A549 (cell line),influenza virus strain PR8-delta-NS1 (4hr),1,141M,5 SRR10439768,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),NaN,1,22M,5 SRR10439769,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),NaN,2,14M,5 SRR10439770,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),"PD0325901 , CHIR99021",1,25M,5 SRR10439771,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),"PD0325901 , CHIR99021",2,20M,5 SRR10439772,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),NaN,1,28M,5 SRR10439773,Zhang2020bcatenin,M. musculus,GRO-seq,ESC (cell line),NaN,2,18M,5 SRR10441340,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,30M,1 SRR10441341,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,31M,1 SRR10441342,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,30M,1 SRR10441343,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,31M,1 SRR10441344,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,31M,1 SRR10441345,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,33M,1 SRR10441346,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,10M,4 SRR10441347,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,19M,2 SRR10441348,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,17M,2 SRR10441349,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,16M,2 SRR10441350,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,18M,2 SRR10441351,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,13M,3 SRR10441352,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,12M,3 SRR10441353,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,11M,3 SRR10441354,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,15M,3 SRR10441355,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,11M,3 SRR10441356,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,5M,4 SRR10441357,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,16M,2 SRR10441358,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,6M,4 SRR10441359,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,17M,2 SRR10441360,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,20M,1 SRR10441361,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),1,8M,4 SRR10441362,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),2,22M,1 SRR10441363,Patel2020robust,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (7day),3,13M,3 SRR10486671,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),1,24M,3 SRR10486672,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),2,21M,3 SRR10486673,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),3,30M,3 SRR10486674,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),1,62M,2 SRR10486675,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),2,26M,2 SRR10486676,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),3,58M,5 SRR10486677,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),1,24M,3 SRR10486678,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),2,21M,3 SRR10486679,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),PBS (4hr),3,25M,4 SRR10486680,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),1,65M,2 SRR10486681,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),2,55M,1 SRR10486682,Nguyen2020dichotomous,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (4hr),3,147M,3 SRR10502417,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , acyclovir (5hr)",1,27M,2 SRR10502418,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , acyclovir (5hr)",2,32M,1 SRR10502419,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , DMSO (6hr)",1,23M,3 SRR10502420,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , DMSO (6hr)",2,28M,2 SRR10502421,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , flavopiridol (6hr)",1,27M,3 SRR10502422,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , flavopiridol (6hr)",2,28M,3 SRR10582180,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,36M,1 SRR10582181,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 SRR10582182,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,34M,1 SRR10582183,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 SRR10582184,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,33M,1 SRR10582185,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,33M,1 SRR10582186,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,30M,1 SRR10582187,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,32M,1 SRR10582188,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , AZ'5576 (20min)",1,31M,1 SRR10582189,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"4-thiouridine (5min) , DMSO (20min)",1,32M,1 SRR10582190,Fan2020drb,H. sapiens,other,MV4-11 (cell line),"1-NM-PP1 (20min) , 4-thiouridine (5min)",1,31M,1 SRR10582201,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),DMSO (4hr),1,47M,2 SRR10582202,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),THZ531 (4hr),1,29M,1 SRR10582203,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),THZ531 (4hr),1,24M,2 SRR10582204,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,38M,2 SRR10582205,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,25M,3 SRR10582206,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,25M,3 SRR10582207,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,28M,2 SRR10582208,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , THZ531 (4hr)",1,24M,2 SRR10582209,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB 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sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,27M,1 SRR10582254,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,25M,1 SRR10582255,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,21M,1 SRR10582256,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,25M,1 SRR10582257,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,24M,1 SRR10582258,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"DRB (4hr) , DMSO (4hr)",1,24M,1 SRR10582259,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,26M,1 SRR10582260,Fan2020drb,H. sapiens,PRO-seq,MV4-11 (cell line),"1-NM-PP1 (4hr) , DRB (4hr)",1,23M,1 SRR10601203,Ikegami2020phosphorylated,H. sapiens,GRO-seq,BJ5ta (cell line),NaN,1,34M,1 SRR10601204,Ikegami2020phosphorylated,H. sapiens,GRO-seq,BJ5ta (cell line),NaN,2,35M,1 SRR10669528,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),NaN,1,41M,2 SRR10669529,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),doxycycline (2day),1,59M,3 SRR10669530,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),NaN,1,42M,2 SRR10669531,Bi2020enhancer,H. sapiens,GRO-seq,T47D (cell line),doxycycline (2day),1,48M,2 SRR10669536,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),1,28M,1 SRR10669537,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),2,26M,1 SRR10669538,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),DMSO (1hr),3,25M,1 SRR10669539,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),1,26M,1 SRR10669540,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),2,26M,1 SRR10669541,Smith2021peppro,H. sapiens,PRO-seq,ESC (cell line),romidepsin (1hr),3,29M,1 SRR10673649,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),DMSO,1,21M,3 SRR10673650,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),DMSO,2,17M,3 SRR10673651,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),trichostatin A (10min),1,19M,3 SRR10673652,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),trichostatin A (10min),2,12M,3 SRR10673653,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),trichostatin A (30min),1,20M,3 SRR10673654,Vaid2020release,D. melanogaster,PRO-seq,S2 (cell line),trichostatin A (30min),2,16M,3 SRR10737798,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,1,49M,2 SRR10737799,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,2,47M,1 SRR10737800,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,3,49M,2 SRR10737801,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,1,49M,1 SRR10737802,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,2,49M,1 SRR10737803,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,3,49M,1 SRR10737804,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,1,47M,1 SRR10737805,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,2,46M,1 SRR10737806,Tena2020induction,M. musculus,GRO-seq,ESC (primary),NaN,3,46M,1 SRR10737807,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,1,47M,1 SRR10737808,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,2,46M,1 SRR10737809,Tena2020induction,M. musculus,GRO-seq,NSPC (primary),NaN,3,45M,1 SRR10760415,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2 (1day) , flavopiridol (1hr)",1,36M,4 SRR10760416,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2 (3day) , flavopiridol (1hr)",1,31M,4 SRR10760417,Li2020human,H. sapiens,PRO-seq,foreskin fibroblast (primary),"HCMV strain TB40/E IE2 (3day) , flavopiridol (1hr) , phosphonoformic acid (3day)",1,35M,4 SRR10808263,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",1,37M,1 SRR10808264,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",1,33M,1 SRR10836717,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",2,46M,1 SRR10836718,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",2,31M,1 SRR10836719,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",3,42M,1 SRR10836720,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",3,36M,1 SRR10836721,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",1,32M,1 SRR10836722,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",1,39M,1 SRR10836723,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",2,42M,1 SRR10836724,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",2,41M,1 SRR10836725,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , DMSO (6hr)",3,26M,4 SRR10836726,Ba2020ctcf,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"STI-571 (4day) , indoleacetic acid (102hr)",3,32M,3 SRR10897090,Ma2020super,H. sapiens,GRO-seq,A549 (cell line),"PBS (1day) , PBS (2day)",1,31M,2 SRR10897091,Ma2020super,H. sapiens,GRO-seq,A549 (cell line),"cisplatin (1day) , cisplatin (2day)",1,24M,2 SRR10906603,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),NaN,1,37M,4 SRR10906604,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),1,43M,2 SRR10906605,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),NaN,2,29M,3 SRR10906606,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),2,30M,4 SRR10915520,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),NaN,1,47M,3 SRR10915521,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),NaN,1,52M,3 SRR10915522,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),NaN,1,43M,3 SRR10915523,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,33M,5 SRR10915524,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,27M,4 SRR10915525,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,34M,4 SRR10915526,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,58M,5 SRR10915527,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,29M,4 SRR10915528,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),EGF (15min),1,57M,4 SRR10915533,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),lipopolysaccharide (4hr),1,41M,2 SRR11024606,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NaN,1,140M,2 SRR11024607,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1hr),1,120M,2 SRR11024608,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (4hr),1,136M,2 SRR11024609,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,49M,3 SRR11024610,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NaN,1,92M,2 SRR11024611,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (2hr),1,91M,2 SRR11024612,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,75M,1 SRR11024613,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NaN,1,70M,1 SRR11024614,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (2hr),1,71M,1 SRR11024615,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),auxin (1day),1,74M,1 SRR11024616,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),DMSO (1hr),1,49M,1 SRR11024617,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , DMSO (1hr)",1,47M,2 SRR11024618,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , flavopiridol (1hr)",1,45M,3 SRR11024619,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , flavopiridol (1hr)",1,50M,3 SRR11024620,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),DMSO (1hr),1,148M,1 SRR11024621,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NVP2 (1hr),1,98M,3 SRR11024622,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"NVP2 (1hr) , auxin (2hr)",1,137M,3 SRR11024623,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NaN,1,143M,1 SRR11024624,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),heat shock (1hr),1,64M,1 SRR11024625,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , heat shock (1hr)",1,101M,1 SRR11024626,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),NaN,2,71M,3 SRR11024627,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),heat shock (1hr),2,15M,3 SRR11024628,Aoi2020nelf,H. sapiens,PRO-seq,DLD1 Flp-In (cell line),"auxin (2hr) , heat shock (1hr)",2,46M,4 SRR11024629,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),NaN,1,121M,3 SRR11024631,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),auxin (2hr),1,113M,2 SRR11024632,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),NaN,2,115M,2 SRR11024633,Aoi2020nelf,H. sapiens,PRO-cap,DLD1 Flp-In (cell line),auxin (2hr),2,120M,2 SRR1105736,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 SRR1105737,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,137M,3 SRR1105738,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,161M,4 SRR1105739,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),2,148M,3 SRR1105740,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,179M,3 SRR1105741,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,160M,2 SRR11059463,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),NaN,1,45M,2 SRR11059464,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),NaN,2,45M,2 SRR11059465,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (1day),1,29M,2 SRR11059466,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (1day),2,36M,2 SRR11059467,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (12hr),1,26M,1 SRR11059468,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (12hr),2,21M,2 SRR11059469,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (6hr),1,25M,2 SRR11059470,Johnston2020nascent,H. sapiens,PRO-seq,THP1 (cell line),INCB059872 (6hr),2,19M,2 SRR1121678,Erhard2015nascent,Z. mays,GRO-seq,seedling (tissue),NaN,1,50M,2 SRR1121679,Erhard2015nascent,Z. mays,GRO-seq,seedling (tissue),NaN,1,50M,2 SRR11273554,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",1,62M,1 SRR11273555,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",2,74M,1 SRR11273556,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (1hr)",1,66M,1 SRR11273557,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (1hr)",2,71M,1 SRR11273558,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,70M,1 SRR11273559,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,78M,1 SRR11273560,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (2hr)",1,78M,1 SRR11273561,Jaeger2020selective,H. sapiens,other,HCT116 (cell line),"4-thiouridine (5min) , dTAGV-1 (2hr)",2,74M,1 SRR11314417,Park2020global,H. sapiens,GRO-seq,TRExBCBL1 (cell line),NaN,1,45M,1 SRR11314418,Park2020global,H. sapiens,GRO-seq,TRExBCBL1 (cell line),doxycycline (1day),1,56M,2 SRR1145801,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),NaN,1,244M,2 SRR1145808,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (2day),1,178M,2 SRR1145815,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (5day),1,51M,3 SRR1145822,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (7day),1,52M,2 SRR1145829,Wang2015epigenetic,H. sapiens,GRO-seq,ESC (cell line),pancreatic differentiation protocol (10day),1,49M,2 SRR11554696,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,1,19M,4 SRR11554697,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,2,19M,4 SRR11554698,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,3,26M,3 SRR11554699,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,16M,4 SRR11554700,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,14M,4 SRR11554701,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,16M,0 SRR11554702,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,1,13M,4 SRR11554703,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,2,22M,3 SRR11554704,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,3,29M,2 SRR11554705,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,14M,4 SRR11554706,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,19M,4 SRR11554707,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,25M,3 SRR11554708,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,1,20M,3 SRR11554709,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,2,26M,3 SRR11554710,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,3,32M,2 SRR11554711,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,4,10M,4 SRR11554712,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,5,34M,2 SRR11554713,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,6,12M,4 SRR11554714,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),1,16M,4 SRR11554715,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),2,16M,4 SRR11554716,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),3,23M,3 SRR11554717,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),4,9M,5 SRR11554718,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),5,28M,3 SRR11554719,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),doxycycline (1day),6,21M,4 SRR11554720,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,1,30M,5 SRR11554721,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,2,34M,5 SRR11554722,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,1,36M,5 SRR11554723,Cosby2021recurrent,M. velifer,PRO-seq,embryonic fibroblast (cell line),NaN,2,36M,5 SRR11607564,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Bap170 (5day),2,23M,3 SRR11607567,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Nurf301 (5day),2,32M,3 SRR11607570,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Bap170 (5day) , dsRNA Nurf301 (5day)",2,35M,3 SRR11607573,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),2,34M,3 SRR11607576,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),2,27M,3 SRR1168364,Zhang2019arerg,H. sapiens,GRO-seq,VCaP (cell line),NaN,1,33M,3 SRR1168365,Zhang2019arerg,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (2hr),1,30M,1 SRR11785044,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,1,54M,1 SRR11785045,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,2,44M,1 SRR11785046,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,1,34M,1 SRR11785047,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,2,44M,1 SRR11785048,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,1,51M,1 SRR11785049,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,2,50M,1 SRR11785050,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,1,51M,1 SRR11785051,Liu2021transcription,H. sapiens,PRO-seq,CD34+ erythroblast (primary),NaN,2,48M,1 SRR11789179,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,26M,2 SRR11793825,Judd2020unpublished,H. sapiens,PRO-seq,K562 (cell line),NaN,1,11M,4 SRR11793826,Judd2020unpublished,H. sapiens,PRO-seq,K562 (cell line),NaN,2,13M,4 SRR11793827,Judd2020unpublished,H. sapiens,other,K562 (cell line),NaN,1,35M,1 SRR11793828,Judd2020unpublished,H. sapiens,other,K562 (cell line),NaN,2,33M,1 SRR11793829,Judd2020unpublished,H. sapiens,other,K562 (cell line),NaN,1,48M,4 SRR11793830,Judd2020unpublished,H. sapiens,other,K562 (cell line),NaN,2,31M,3 SRR11802024,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),NaN,1,51M,1 SRR11802025,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,50M,3 SRR11802026,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,51M,2 SRR11802027,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,61M,2 SRR11802028,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,29M,4 SRR11802029,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),NaN,1,14M,4 SRR11802030,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),NaN,1,21M,4 SRR11802031,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,12M,5 SRR11802032,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,19M,4 SRR11802033,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,19M,4 SRR11802034,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,13M,5 SRR11802035,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,17M,5 SRR11802036,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,19M,4 SRR11802037,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,23M,3 SRR11802038,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,12M,5 SRR11802039,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,18M,4 SRR11802040,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,9M,4 SRR11802041,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,19M,3 SRR11802042,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,26M,4 SRR11802043,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen (tissue),NaN,1,48M,1 SRR11802044,Mukai2020chromatin,C. lupus familiaris,ChRO-seq,spleen hemangiosarcoma (tissue),NaN,1,44M,1 SRR11811942,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),1,8M,4 SRR11811943,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),2,9M,4 SRR11811944,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS8 (60hr),1,13M,3 SRR11811945,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS8 (60hr),2,13M,3 SRR11811946,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",1,14M,3 SRR11811947,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",2,14M,3 SRR11811948,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",1,11M,4 SRR11811949,Huang2020integrator,D. melanogaster,PRO-seq,DL1 (cell line),"copper sulfate (1day) , dsRNA IntS8 (60hr)",2,13M,3 SRR11849645,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),methanol (2hr),1,18M,2 SRR11849646,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),methanol (12hr),1,17M,3 SRR11849647,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),nitro-octadec-9-enoic acid (2hr),1,21M,1 SRR11849648,Linnakuosmanen2020nrf2,H. sapiens,GRO-seq,HUVEC (primary),nitro-octadec-9-enoic acid (12hr),1,18M,2 SRR1187957,Mohn2014rhino,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,73M,4 SRR1187958,Mohn2014rhino,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,113M,5 SRR1192053,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"dihydrotestosterone (1hr) , DMSO (2hr)",1,53M,2 SRR1192054,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"DMSO (2hr) , ethanol (1hr)",1,44M,2 SRR1192055,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"SD70 (2hr) , dihydrotestosterone (1hr)",1,45M,2 SRR1192056,Jin2014chem,H. sapiens,GRO-seq,LNCaP (cell line),"SD70 (2hr) , ethanol (1hr)",1,38M,2 SRR11936615,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",1,25M,1 SRR11936616,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",2,29M,1 SRR11936617,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",3,32M,1 SRR11936618,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",4,31M,1 SRR11936619,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",1,30M,1 SRR11936620,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",2,29M,1 SRR11936621,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",3,25M,1 SRR11936622,Dai2020loop,M. musculus,GRO-seq,pro B cell (primary),"DMSO (3day) , STI-571 (4day)",4,23M,1 SRR11936623,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",1,17M,2 SRR11936624,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",2,19M,2 SRR11936625,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"DMSO (3day) , STI-571 (4day)",3,23M,1 SRR11936626,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",1,25M,1 SRR11936627,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",2,25M,1 SRR11936628,Dai2020loop,M. musculus,GRO-seq,v-Abl pro B cell (cell line),"doxycycline (3day) , indoleacetic acid (3day) , STI-571 (4day)",3,34M,1 SRR12083664,Blumberg2021characterizing,H. sapiens,PRO-seq,K562 (cell line),NaN,1,41M,1 SRR12083665,Blumberg2021characterizing,H. sapiens,PRO-seq,K562 (cell line),NaN,2,47M,1 SRR12091767,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,1,38M,1 SRR12091768,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,2,34M,1 SRR12091769,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,1,56M,1 SRR12091770,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,2,29M,1 SRR12091771,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (30min),1,50M,1 SRR12091772,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (30min),2,35M,1 SRR12091773,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1hr),1,38M,1 SRR12091774,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1hr),2,34M,1 SRR12091775,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (2hr),1,33M,1 SRR12091776,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (2hr),2,33M,1 SRR12091777,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (6hr),1,58M,2 SRR12091778,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (6hr),2,35M,1 SRR12091779,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1day),1,73M,3 SRR12091780,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),dTAG47 (1day),2,73M,2 SRR12091781,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),GSK2879552 (1day),1,77M,2 SRR12091782,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),GSK2879552 (1day),2,62M,2 SRR12091783,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),"GSK2879552 (1day) , dTAG47 (1day)",1,71M,3 SRR12091784,Stengel2020definition,H. sapiens,PRO-seq,Kasumi-1 (cell line),"GSK2879552 (1day) , dTAG47 (1day)",2,70M,4 SRR1219737,Sigova2013divergent,H. sapiens,GRO-seq,ESC (cell line),"RPMI/B27 (3day) , activin (2day)",1,71M,1 SRR122339,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),NaN,1,22M,3 SRR122340,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,23M,2 SRR122341,Wang2011reprogramming,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),3,21M,3 SRR1224573,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (30min),1,191M,2 SRR1224574,Allen2014global,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (30min),1,165M,4 SRR1233867,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),NaN,1,155M,2 SRR1233868,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (10min),1,150M,2 SRR1233869,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (30min),1,156M,2 SRR1233870,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (1hr),1,168M,2 SRR1233871,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (3hr),1,153M,2 SRR1233872,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),NaN,2,197M,3 SRR1233873,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (10min),2,152M,5 SRR1233874,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (30min),2,162M,3 SRR1233875,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (1hr),2,166M,3 SRR1233876,Step2014antidiabetic,M. musculus,GRO-seq,3T3-L1 (cell line),rosiglitazone (3hr),2,142M,3 SRR12482690,Gally2020gain,H. sapiens,PRO-seq,A549 (cell line),NaN,1,124M,2 SRR12482691,Gally2020gain,H. sapiens,PRO-seq,A549 (cell line),NaN,2,125M,2 SRR12482692,Gally2020gain,H. sapiens,PRO-seq,BEAS-2B (cell line),NaN,1,75M,3 SRR12482693,Gally2020gain,H. sapiens,PRO-seq,BEAS-2B (cell line),NaN,2,131M,2 SRR12482694,Gally2020gain,H. sapiens,PRO-seq,LC-2/ad (cell line),NaN,1,138M,2 SRR12482695,Gally2020gain,H. sapiens,PRO-seq,LC-2/ad (cell line),NaN,2,118M,2 SRR12634522,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),flavopiridol (2hr),1,24M,4 SRR12634523,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (5min)",1,9M,4 SRR12634524,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (15min)",1,15M,4 SRR12634525,Barbieri2020rapid,H. sapiens,other,THP1 (cell line),"flavopiridol (2hr) , lipopolysaccharide (30min)",1,24M,4 SRR12634526,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),NaN,1,30M,4 SRR12634527,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),NaN,1,35M,5 SRR12634528,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),NaN,2,17M,5 SRR12634529,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),NaN,1,30M,4 SRR12634530,Barbieri2020rapid,H. sapiens,other,HeLa (cell line),NaN,1,11M,3 SRR12650990,Barbieri2020rapid,H. sapiens,other,iPSC (cell line),NaN,2,0M,5 SRR12699328,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (10min),1,30M,1 SRR12699329,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (10min),2,47M,1 SRR12699330,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (1hr),1,43M,1 SRR12699331,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (1hr),2,23M,1 SRR12699332,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (30min),1,39M,1 SRR12699333,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),BRM014 (30min),2,36M,1 SRR12699334,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (1hr),1,68M,1 SRR12699335,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (1hr),2,33M,1 SRR12699336,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),1,36M,1 SRR12699337,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),2,42M,1 SRR12699338,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),1,121M,1 SRR12699339,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),2,50M,1 SRR12699340,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),1,57M,1 SRR12699341,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),DMSO (3hr),2,40M,1 SRR12699342,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),1,40M,3 SRR12699343,Schick2021acute,H. sapiens,PRO-seq,HAP1 (cell line),dTAG47 (3hr),2,35M,1 SRR1275489,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),DMSO (2day),1,11M,4 SRR1275490,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),DMSO (2day),2,12M,4 SRR1275491,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),leflunomide (2day),1,16M,4 SRR1275492,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),leflunomide (2day),2,17M,4 SRR1275493,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),A771726 (2day),1,26M,5 SRR1275494,Tan2016stress,H. sapiens,GRO-seq,A375 (cell line),A771726 (2day),2,21M,5 SRR12774937,Shamie2020unpublished,C. griseus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 SRR12774938,Shamie2020unpublished,C. griseus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,8M,4 SRR12774939,Shamie2020unpublished,C. griseus,GRO-seq,brain (tissue),NaN,1,9M,4 SRR12774940,Shamie2020unpublished,C. griseus,GRO-seq,CHO-K1 (cell line),NaN,1,33M,2 SRR12774941,Shamie2020unpublished,C. griseus,GRO-seq,CHO-K1 (cell line),NaN,2,30M,2 SRR12774942,Shamie2020unpublished,C. griseus,GRO-seq,kidney (tissue),NaN,1,11M,3 SRR12774943,Shamie2020unpublished,C. griseus,GRO-seq,liver (tissue),NaN,1,8M,4 SRR12774944,Shamie2020unpublished,C. griseus,GRO-seq,lung (tissue),NaN,1,10M,4 SRR12774945,Shamie2020unpublished,C. griseus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,14M,4 SRR12774946,Shamie2020unpublished,C. griseus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,12M,4 SRR12774947,Shamie2020unpublished,C. griseus,GRO-cap,brain (tissue),NaN,1,31M,5 SRR12774948,Shamie2020unpublished,C. griseus,GRO-cap,CHO-K1 (cell line),NaN,1,29M,3 SRR12774949,Shamie2020unpublished,C. griseus,GRO-cap,CHO-K1 (cell line),NaN,2,23M,3 SRR12774950,Shamie2020unpublished,C. griseus,GRO-cap,kidney (tissue),NaN,1,23M,4 SRR12774951,Shamie2020unpublished,C. griseus,GRO-cap,liver (tissue),NaN,1,3M,5 SRR12774952,Shamie2020unpublished,C. griseus,GRO-cap,lung (tissue),NaN,1,19M,4 SRR1297231,Wei2016rbfox2,M. musculus,GRO-seq,cardiomyocyte (primary),NaN,1,36M,2 SRR1297232,Wei2016rbfox2,M. musculus,GRO-seq,cardiomyocyte (primary),NaN,1,37M,2 SRR1297233,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,1,15M,3 SRR1297234,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,2,14M,3 SRR1297235,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,1,10M,4 SRR1297236,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,2,11M,3 SRR1297237,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,1,12M,3 SRR1297238,Wei2016rbfox2,M. musculus,GRO-seq,MEF (cell line),NaN,2,13M,3 SRR1302423,Skowronskakrawczyk2014required,R. norvegicus,GRO-seq,GC pituitary cell (cell line),NaN,1,36M,2 SRR1302424,Skowronskakrawczyk2014required,R. norvegicus,GRO-seq,GC pituitary cell (cell line),NaN,1,40M,2 SRR13114370,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,37M,4 SRR13114371,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,25M,4 SRR13114372,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,2,29M,4 SRR13114373,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,2,24M,4 SRR13114374,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,3,29M,4 SRR13114375,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),NaN,3,20M,4 SRR13114376,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",1,32M,1 SRR13114377,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",2,36M,1 SRR13114378,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",3,35M,1 SRR13114379,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",1,24M,1 SRR13114380,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",2,27M,1 SRR13114381,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",3,27M,1 SRR13114382,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",1,36M,1 SRR13114383,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",2,38M,1 SRR13114384,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (4day) , interleukin-4 (4day)",3,35M,1 SRR13114385,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",1,29M,1 SRR13114386,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",2,55M,1 SRR13114387,Zhang2021physiological,M. musculus,GRO-seq,splenic B cell (primary),"anti-IgD-dextran (4day) , lipopolysaccharide (4day)",3,26M,1 SRR13208368,Harman2021invivo,M. musculus,GRO-seq,pro B cell (primary),NaN,1,30M,1 SRR13208369,Harman2021invivo,M. musculus,GRO-seq,pro B cell (primary),NaN,1,30M,2 SRR13242137,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),NaN,1,18M,0 SRR13242138,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),triptolide (1hr),1,20M,0 SRR13242139,Chivu2020unpublished,H. sapiens,ChRO-seq,K562 (cell line),triptolide (4hr),1,12M,0 SRR13242380,Chivu2020unpublished,E. caballus,ChRO-seq,liver (tissue),NaN,1,25M,5 SRR13242381,Chivu2020unpublished,E. caballus,ChRO-seq,liver (tissue),NaN,2,28M,3 SRR1342250,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , serum starvation (1day)",1,58M,3 SRR1342251,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , doxycycline (4day) , serum starvation (1day)",1,45M,1 SRR1342252,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , serum starvation (1day)",2,114M,4 SRR1342253,Gardini2014integrator,H. sapiens,GRO-seq,HeLa (cell line),"EGF (30min) , doxycycline (4day) , serum starvation (1day)",2,71M,3 SRR13632937,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 SRR13632938,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,20M,1 SRR13632939,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 SRR13632940,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,18M,2 SRR1406747,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),NaN,2,14M,3 SRR1406748,Kaikkonen2014control,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A165 (2hr),2,16M,2 SRR1501091,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,144M,3 SRR1501092,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),NaN,2,118M,3 SRR1501093,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (12hr),1,129M,3 SRR1501094,Leveille2015genome,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (12hr),2,112M,3 SRR1503602,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,5M,5 SRR1503603,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),NaN,2,4M,5 SRR1503604,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),1,8M,4 SRR1503605,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),2,2M,5 SRR1503606,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Gaf (5day),1,8M,4 SRR1503607,Fuda2015gaga,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Gaf (5day),2,7M,5 SRR1517780,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (1hr),1,49M,1 SRR1517781,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (4hr),1,57M,1 SRR1517782,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (7hr),1,97M,2 SRR1517783,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),1,154M,2 SRR1517784,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,104M,1 SRR1517785,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,80M,2 SRR1517786,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,77M,2 SRR1517787,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),1,103M,1 SRR1517788,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),2,79M,2 SRR1517789,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (12hr),2,86M,2 SRR1517790,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),3,60M,1 SRR1517791,Fang2014circadian,M. musculus,GRO-seq,liver (tissue),light cycle (10hr),1,69M,1 SRR1519032,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,27M,1 SRR1519033,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,21M,1 SRR1519034,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),3,27M,1 SRR1519035,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,19M,2 SRR1519036,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,29M,1 SRR1519037,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),3,20M,2 SRR1519038,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),1,20M,1 SRR1519039,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),2,24M,1 SRR1519040,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (40min),3,23M,1 SRR1519041,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",1,22M,1 SRR1519042,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",2,22M,1 SRR1519043,Franco2015tnfalpha,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (40min) , TNF-alpha (40min)",3,24M,1 SRR1542320,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,23M,4 SRR1542321,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,4 SRR1542322,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,42M,4 SRR1542323,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,41M,5 SRR1542324,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,50M,2 SRR1542325,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),retinoic acid (1hr),1,44M,2 SRR1542326,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,37M,3 SRR1542327,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,49M,2 SRR1542328,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),retinoic acid (1hr),1,23M,2 SRR1542329,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 SRR1542330,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,47M,2 SRR1542331,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,46M,2 SRR1542332,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,44M,2 SRR1542333,Liu2014enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,2 SRR1544602,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,103M,3 SRR1544603,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,2,89M,2 SRR1544604,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,103M,2 SRR1544605,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,90M,2 SRR1544606,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,90M,2 SRR1544608,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,74M,1 SRR1544609,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,70M,1 SRR1544610,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,78M,1 SRR1544611,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,91M,2 SRR1544612,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,27M,1 SRR1544613,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,33M,1 SRR1544614,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,33M,1 SRR1544615,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,34M,1 SRR1552315,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,2,107M,2 SRR1552316,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,2,66M,2 SRR1552480,Core2014analysis,H. sapiens,GRO-cap,K562 (cell line),NaN,1,37M,4 SRR1552481,Core2014analysis,H. sapiens,GRO-cap,K562 (cell line),NaN,1,19M,4 SRR1552482,Core2014analysis,H. sapiens,GRO-cap,GM12878 (cell line),NaN,1,36M,4 SRR1552483,Core2014analysis,H. sapiens,GRO-cap,GM12878 (cell line),NaN,1,11M,4 SRR1552484,Core2014analysis,H. sapiens,GRO-seq,K562 (cell line),NaN,1,23M,1 SRR1552485,Core2014analysis,H. sapiens,GRO-seq,GM12878 (cell line),NaN,1,165M,2 SRR1560531,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,81M,1 SRR1560532,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,16M,3 SRR1560533,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (20min),1,77M,1 SRR1560534,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (20min),2,15M,3 SRR1560535,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (1hr),1,70M,1 SRR1560536,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (1hr),2,20M,2 SRR1560537,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (3hr),1,63M,1 SRR1560538,Hah2015inflammation,M. musculus,GRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (3hr),2,15M,3 SRR1574538,Chen2014gene,H. sapiens,GRO-seq,ESC (cell line),NaN,1,16M,3 SRR1574539,Chen2014gene,H. sapiens,GRO-seq,ESC (cell line),NaN,1,19M,3 SRR1596500,Andersson2014nuclear,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,21M,1 SRR1596501,Andersson2014nuclear,H. sapiens,GRO-seq,HeLa (cell line),NaN,2,33M,1 SRR1609863,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,43M,2 SRR1609864,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,3 SRR1609865,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,49M,2 SRR1609866,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 SRR1609867,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,24M,2 SRR1609868,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,41M,3 SRR1609869,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,33M,3 SRR1609870,Li2015condensin,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,39M,2 SRR1611829,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,82M,4 SRR1611830,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),NaN,2,150M,4 SRR1611831,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),NaN,3,162M,4 SRR1611832,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),NaN,1,169M,4 SRR1611833,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),NaN,2,198M,4 SRR1611834,Meng2014convergent,M. musculus,GRO-seq,splenic germinal center B cell (primary),NaN,3,195M,4 SRR1611835,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",1,179M,3 SRR1611836,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",2,202M,4 SRR1611837,Meng2014convergent,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (60hr) , interleukin-4 (60hr)",3,163M,3 SRR1611838,Meng2014convergent,M. musculus,GRO-seq,MEF (cell line),NaN,1,137M,3 SRR1611839,Meng2014convergent,M. musculus,GRO-seq,MEF (cell line),NaN,2,127M,3 SRR1611840,Meng2014convergent,H. sapiens,GRO-seq,Ramos (cell line),NaN,1,106M,2 SRR1648886,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,27M,3 SRR1648887,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,31M,2 SRR1648888,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,28M,2 SRR1648889,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,27M,2 SRR1648890,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,25M,3 SRR1648891,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,26M,3 SRR1648892,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,22M,2 SRR1648893,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,28M,2 SRR1648894,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),1,24M,2 SRR1648895,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,23M,2 SRR1648900,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,37M,2 SRR1648901,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,26M,3 SRR1648904,Puc2015ligand,H. sapiens,PRO-cap,LNCaP (cell line),ethanol (1hr),1,9M,5 SRR1648905,Puc2015ligand,H. sapiens,PRO-cap,LNCaP (cell line),dihydrotestosterone (1hr),1,19M,4 SRR1648909,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),4,45M,3 SRR1648910,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),4,47M,3 SRR1648911,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),2,41M,3 SRR1648912,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),2,37M,2 SRR1652068,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,23M,4 SRR1652069,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,25M,4 SRR1652070,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (3hr) , tetrodotoxin (14hr)",1,25M,3 SRR1652071,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,27M,3 SRR1652072,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,35M,3 SRR1652073,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (3hr) , tetrodotoxin (14hr)",1,32M,3 SRR1652074,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,38M,3 SRR1652075,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,37M,2 SRR1652076,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (14hr),1,33M,2 SRR1652077,Wang2015lsd1n,M. musculus,GRO-seq,cortical neuron (primary),"KCl (1hr) , tetrodotoxin (14hr)",1,33M,2 SRR1661564,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 SRR1661565,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,13M,4 SRR1661566,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 SRR1661567,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,4 SRR1661568,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,9M,5 SRR1661569,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,5 SRR1661570,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,9M,5 SRR1661571,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,5M,5 SRR1661572,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 SRR1661573,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 SRR1661574,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 SRR1661575,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,4M,5 SRR1661576,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 SRR1661577,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,8M,4 SRR1661578,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,6M,5 SRR1661579,Fong2014pre,H. sapiens,GRO-seq,HEK293 Flp-In (cell line),"DRB (3hr) , alpha-amanitin (42hr) , doxycycline (14hr)",1,7M,5 SRR1732573,Soccio2015genetic,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),low fat diet (28day),1,67M,3 SRR1734841,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),NaN,1,32M,3 SRR1734842,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),NaN,1,33M,2 SRR1734843,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),NaN,1,51M,1 SRR1734844,Zhang2015enhancer,M. musculus,GRO-seq,AtT20 (cell line),NaN,1,32M,2 SRR1736053,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,39M,1 SRR1736054,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,2,36M,1 SRR1736055,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,30M,1 SRR1736056,Nojima2015mammalian,H. sapiens,other,HeLa (cell line),NaN,1,27M,1 SRR1736059,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),DMSO (4hr),1,52M,2 SRR1736060,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),pladienolides B (4hr),1,35M,2 SRR1736061,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,45M,2 SRR1736062,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,35M,2 SRR1736063,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,46M,1 SRR1736064,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,42M,2 SRR1736065,Nojima2015mammalian,H. sapiens,NET-seq,HeLa (cell line),NaN,1,52M,2 SRR1772449,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV-,1,39M,3 SRR1772450,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV-,2,37M,4 SRR1772451,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV+,1,49M,3 SRR1772452,Illingworth2016polycomb,M. musculus,GRO-seq,ESC (cell line),cell sorting HV+,2,37M,4 SRR1806546,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,26M,1 SRR1806547,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,26M,1 SRR1806548,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,23M,2 SRR1806549,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,22M,2 SRR1806550,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,27M,3 SRR1806551,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,27M,3 SRR1806552,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,27M,3 SRR1806553,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,26M,3 SRR1806554,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,29M,2 SRR1806555,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,29M,2 SRR1806556,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,39M,1 SRR1806557,Andrade2015dna,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,39M,1 SRR1806558,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,28M,3 SRR1806559,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,28M,3 SRR1806560,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,31M,2 SRR1806561,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,31M,2 SRR1806562,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,34M,4 SRR1806563,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,34M,4 SRR1806564,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",1,27M,1 SRR1806565,Andrade2015dna,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (10s)",2,27M,1 SRR1806566,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,34M,1 SRR1806567,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),2,34M,1 SRR1806568,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,35M,4 SRR1806569,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,35M,4 SRR1806570,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,34M,4 SRR1806571,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,34M,4 SRR1806572,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,50M,3 SRR1806573,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,50M,3 SRR1806574,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,35M,2 SRR1806575,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,35M,2 SRR1806576,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,34M,1 SRR1806577,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),2,34M,1 SRR1806578,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,37M,3 SRR1806579,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,37M,3 SRR1806580,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,34M,3 SRR1806581,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,33M,3 SRR1806582,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,36M,3 SRR1806583,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,35M,3 SRR1806584,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",1,52M,2 SRR1806585,Andrade2015dna,H. sapiens,other,skin fibroblast (primary),"bromouridine (30min) , ultraviolet C (10s)",2,51M,2 SRR1823901,Niskanen2015global,H. sapiens,GRO-seq,K562 (cell line),NaN,1,22M,1 SRR1823902,Niskanen2015global,H. sapiens,GRO-seq,K562 (cell line),NaN,2,20M,2 SRR1823903,Niskanen2015global,H. sapiens,GRO-seq,K562 (cell line),heat shock (30min),1,18M,2 SRR1823904,Niskanen2015global,H. sapiens,GRO-seq,K562 (cell line),heat shock (30min),2,17M,2 SRR1873284,Telese2015lrp8,M. musculus,GRO-seq,cortical neuron (primary),NaN,1,89M,2 SRR1873285,Telese2015lrp8,M. musculus,GRO-seq,cortical neuron (primary),reelin (1hr),1,84M,3 SRR1916552,Elkon2015myc,H. sapiens,GRO-seq,U2OS (cell line),water (5hr),1,112M,3 SRR1916553,Elkon2015myc,H. sapiens,GRO-seq,U2OS (cell line),doxycycline (5hr),1,121M,3 SRR1916554,Elkon2015myc,H. sapiens,GRO-seq,U2OS (cell line),water (5hr),2,101M,3 SRR1916555,Elkon2015myc,H. sapiens,GRO-seq,U2OS (cell line),doxycycline (5hr),2,102M,3 SRR1930084,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (30min),1,15M,2 SRR1930085,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (30min),2,10M,4 SRR1930086,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (30min),1,14M,3 SRR1930087,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (30min),2,11M,3 SRR1930088,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),interleukin-1b (30min),1,2M,5 SRR1930089,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),interleukin-1b (30min),2,10M,4 SRR1930090,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (30min),1,14M,3 SRR1930091,Stender2017structural,H. sapiens,GRO-seq,MCF7 (cell line),TNF-alpha (30min),2,9M,4 SRR1951426,Heinaniemi2016transcription,H. sapiens,GRO-seq,Nalm6 (cell line),NaN,1,11M,3 SRR1951427,Heinaniemi2016transcription,H. sapiens,GRO-seq,Nalm6 (cell line),stromal cell co-culture (1day),1,10M,3 SRR1951432,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),NaN,1,27M,1 SRR1951434,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),stromal cell co-culture (1day),2,17M,2 SRR1951435,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),stromal cell co-culture (2day),1,11M,3 SRR1951436,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),differentiated (1day),1,10M,4 SRR1951437,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),differentiated (1day),1,2M,5 SRR1991266,Sigova2015transcription,M. musculus,GRO-seq,ESC (cell line),NaN,1,47M,2 SRR1991267,Sigova2015transcription,M. musculus,GRO-seq,ESC (cell line),DMSO (6hr),1,17M,4 SRR1991268,Sigova2015transcription,M. musculus,GRO-seq,ESC (cell line),actinomycin D (6hr),1,6M,5 SRR2033378,Duttke2017unpublished,D. melanogaster,GRO-cap,S2 (cell line),NaN,1,35M,4 SRR2033379,Duttke2017unpublished,D. melanogaster,GRO-cap,S2 (cell line),NaN,2,21M,4 SRR2033380,Duttke2017unpublished,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,30M,3 SRR2033381,Duttke2017unpublished,D. melanogaster,GRO-seq,S2 (cell line),NaN,2,29M,3 SRR2036963,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),7SK antisense oligonucleotide (12hr),1,44M,1 SRR2036964,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),7SK antisense oligonucleotide (12hr),2,20M,3 SRR2036965,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),control antisense oligonucleotide (12hr),1,65M,5 SRR2036966,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),control antisense oligonucleotide (12hr),2,21M,3 SRR2059423,Zhang2016regulation,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,56M,3 SRR2059424,Zhang2016regulation,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,85M,3 SRR2084592,Chen2015paf1,H. sapiens,other,HCT116 (cell line),NaN,1,60M,1 SRR2084593,Chen2015paf1,H. sapiens,other,HCT116 (cell line),NaN,2,65M,1 SRR2084594,Chen2015paf1,H. sapiens,other,HCT116 (cell line),NaN,1,64M,1 SRR2084595,Chen2015paf1,H. sapiens,other,HCT116 (cell line),NaN,2,51M,1 SRR2129939,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,4M,5 SRR2129940,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,3M,5 SRR2129941,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,5M,5 SRR2129942,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,2M,5 SRR2129943,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,5M,5 SRR2129944,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,3M,5 SRR2129945,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,3M,5 SRR2129946,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,0M,5 SRR2129947,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,2M,5 SRR2129948,Yu2015panoramix,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,2M,5 SRR2131018,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),permissive temperature (2hr),1,57M,5 SRR2132595,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),permissive temperature (2hr),2,57M,5 SRR2132598,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),permissive temperature (2hr),3,142M,5 SRR2132601,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),non-permissive temperature (2hr),1,35M,4 SRR2132603,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),non-permissive temperature (2hr),2,52M,5 SRR2132604,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),non-permissive temperature (2hr),3,120M,4 SRR2132612,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),permissive temperature (2hr),1,26M,4 SRR2132613,Alhusini2017genomewide,S. cerevisiae,GRO-seq,whole yeast (organism),non-permissive temperature (2hr),1,31M,4 SRR2144178,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,1,45M,2 SRR2144179,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,2,28M,2 SRR2144180,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),1,32M,1 SRR2144181,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),2,27M,2 SRR2144182,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),1,51M,2 SRR2144183,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),2,36M,2 SRR2144184,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),1,49M,2 SRR2144185,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),2,7M,4 SRR2144186,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,1,58M,1 SRR2144187,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,2,52M,1 SRR2144188,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),1,12M,3 SRR2144189,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),2,10M,4 SRR2144190,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),1,32M,1 SRR2144191,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),2,47M,1 SRR2144192,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),1,17M,2 SRR2144193,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),2,34M,1 SRR2144194,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,1,37M,1 SRR2144195,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),NaN,2,46M,1 SRR2144196,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),1,24M,1 SRR2144197,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (150s),2,25M,1 SRR2144198,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),1,45M,1 SRR2144199,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (12min),2,69M,1 SRR2144200,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),1,65M,1 SRR2144201,Mahat2016mammalian,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),2,33M,1 SRR2153508,Salony2016akt,H. sapiens,GRO-seq,MCF7 (cell line),AKTi-1/2 (3day),1,93M,5 SRR2153509,Salony2016akt,H. sapiens,GRO-seq,MCF7 (cell line),AKTi-1/2 (3day),2,88M,5 SRR2153510,Salony2016akt,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (3day),1,101M,5 SRR2153511,Salony2016akt,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (3day),2,90M,5 SRR2153512,Salony2016akt,H. sapiens,GRO-seq,HCT116 (cell line),AKTi-1/2 (3day),1,88M,5 SRR2153513,Salony2016akt,H. sapiens,GRO-seq,HCT116 (cell line),AKTi-1/2 (3day),2,91M,4 SRR2153514,Salony2016akt,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (3day),1,13M,5 SRR2153515,Salony2016akt,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (3day),2,174M,5 SRR2226207,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),7SK antisense oligonucleotide (12hr),3,77M,2 SRR2226208,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),7SK antisense oligonucleotide (12hr),4,68M,1 SRR2226209,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),control antisense oligonucleotide (12hr),3,70M,2 SRR2226210,Flynn20167skbaf,M. musculus,GRO-seq,ESC (cell line),control antisense oligonucleotide (12hr),4,77M,1 SRR23938775,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),nutlin-3 (3hr),2,55M,3 SRR23938776,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),nutlin-3 (3hr),1,55M,3 SRR23938777,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),DMSO (3hr),2,49M,3 SRR23938778,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),DMSO (3hr),1,49M,3 SRR23938779,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),nutlin-3 (3hr),2,52M,2 SRR23938780,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),nutlin-3 (3hr),1,55M,3 SRR23938781,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),DMSO (3hr),2,57M,3 SRR23938782,Jones2023unpublished,H. sapiens,PRO-seq,MCF10A (cell line),DMSO (3hr),1,58M,3 SRR2432159,Kantidakis2016mutation,M. musculus,GRO-seq,MEF (cell line),NaN,1,53M,1 SRR2432160,Kantidakis2016mutation,M. musculus,GRO-seq,MEF (cell line),hydroxytamoxifen (1day),1,52M,1 SRR2432161,Kantidakis2016mutation,M. musculus,GRO-seq,MEF (cell line),hydroxytamoxifen (1day),2,43M,1 SRR2432162,Kantidakis2016mutation,M. musculus,GRO-seq,MEF (cell line),NaN,2,75M,1 SRR2518187,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),LIF,1,28M,3 SRR2518188,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),LIF,2,27M,3 SRR2518189,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),LIF,3,26M,4 SRR2518190,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),NaN,1,24M,3 SRR2518191,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),NaN,2,22M,3 SRR2518192,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),NaN,3,27M,3 SRR2518193,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , flavopiridol (1hr)",1,26M,4 SRR2518194,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , flavopiridol (1hr)",2,22M,4 SRR2518195,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , flavopiridol (1hr)",3,25M,4 SRR2518196,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",1,22M,3 SRR2518197,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",2,23M,3 SRR2518198,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",3,21M,3 SRR2518199,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",1,23M,4 SRR2518200,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",2,20M,3 SRR2518201,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",3,22M,3 SRR2518202,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",1,31M,3 SRR2518203,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",2,29M,3 SRR2518204,Strikoudis2016regulation,M. musculus,GRO-seq,ESC (cell line),"LIF , doxycycline (3day)",3,33M,3 SRR2634645,Orioli2016human,H. sapiens,other,IMR90 (cell line),ethynyl uridine (5hr),1,42M,4 SRR2634646,Orioli2016human,H. sapiens,other,IMR90 (cell line),ethynyl uridine (5hr),2,39M,4 SRR2634647,Orioli2016human,H. sapiens,other,IMR90 (cell line),ethynyl uridine (5hr),3,35M,4 SRR2634648,Orioli2016human,H. sapiens,other,IMR90 (cell line),DMSO (5hr),1,10M,5 SRR2634649,Orioli2016human,H. sapiens,other,IMR90 (cell line),DMSO (5hr),2,13M,5 SRR2634650,Orioli2016human,H. sapiens,other,IMR90 (cell line),DMSO (5hr),3,14M,5 SRR2634651,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",1,22M,4 SRR2634652,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",2,19M,4 SRR2634653,Orioli2016human,H. sapiens,other,IMR90 (cell line),"ethynyl uridine (5hr) , serum starvation (5hr)",3,16M,4 SRR2634654,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",1,17M,5 SRR2634655,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",2,17M,5 SRR2634656,Orioli2016human,H. sapiens,other,IMR90 (cell line),"serum starvation (5hr) , DMSO (5hr)",3,16M,5 SRR2724029,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,16M,2 SRR2724030,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,20M,1 SRR2724031,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),1,24M,2 SRR2724032,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (40min),2,23M,2 SRR3004197,Sumida2018ultra,H. sapiens,other,HCEC (cell line),ethynyl uridine (1hr),1,5M,5 SRR3004198,Sumida2018ultra,H. sapiens,other,HCEC (cell line),ethynyl uridine (1hr),2,5M,5 SRR3004199,Sumida2018ultra,H. sapiens,other,HCT116 (cell line),ethynyl uridine (1hr),1,4M,5 SRR3004200,Sumida2018ultra,H. sapiens,other,HCT116 (cell line),ethynyl uridine (1hr),2,5M,4 SRR3051599,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),NaN,1,15M,3 SRR3051600,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),hydroxytamoxifen (60hr),1,28M,1 SRR3051601,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),NaN,2,27M,1 SRR3051602,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),1,27M,1 SRR3051603,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),NaN,3,4M,5 SRR3051604,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),2,3M,5 SRR3051605,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),NaN,4,4M,5 SRR3051606,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),adeno-Cre virus (4hr),3,1M,5 SRR3090582,Wu2017indentifying,M. musculus,GRO-seq,C2C12 (cell line),NaN,1,147M,5 SRR3090583,Wu2017indentifying,M. musculus,GRO-seq,C2C12 (cell line),NaN,2,162M,4 SRR3146638,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (2min),1,21M,3 SRR3146639,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (2min),2,37M,3 SRR3146640,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (5min),1,20M,3 SRR3146641,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (5min),2,38M,3 SRR3146642,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (10min),1,24M,3 SRR3146643,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (10min),2,24M,3 SRR3146644,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (20min),1,33M,3 SRR3146645,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (20min),2,23M,3 SRR3160418,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"interleukin-4 (2day) , DMSO (2day) , anti-CD40 (2day)",1,56M,2 SRR3160419,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"interleukin-4 (2day) , DMSO (2day) , anti-CD40 (2day)",2,59M,1 SRR3160420,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"idelalisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",1,71M,2 SRR3160421,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"idelalisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",2,41M,1 SRR3160422,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"duvelisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",1,36M,2 SRR3160423,Compagno2017phosphatidylinositol,M. musculus,GRO-seq,splenic B cell (primary),"duvelisib (2day) , interleukin-4 (2day) , anti-CD40 (2day)",2,39M,1 SRR3189196,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),1,18M,3 SRR3189197,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),2,36M,3 SRR3189198,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",1,31M,3 SRR3189199,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",2,35M,3 SRR3189200,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),1,24M,3 SRR3189201,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),2,22M,3 SRR3189202,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Gaf (5day) , heat shock (20min)",1,26M,3 SRR3189203,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Gaf (5day) , heat shock (20min)",2,18M,3 SRR3189204,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Hsf (5day),1,24M,3 SRR3189205,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Hsf (5day),2,16M,2 SRR3189206,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Hsf (5day) , heat shock (20min)",1,17M,3 SRR3189207,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Hsf (5day) , heat shock (20min)",2,27M,3 SRR3189208,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),NaN,1,24M,3 SRR3189209,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),NaN,2,30M,3 SRR3189210,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (30s),1,25M,3 SRR3189211,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),heat shock (30s),2,30M,3 SRR3194602,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),NaN,1,44M,2 SRR3194603,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),enterocyte differentiation protocol,1,45M,1 SRR3194604,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),NaN,2,21M,2 SRR3194605,Oittinen2017polycomb,M. musculus,GRO-seq,intestinal organoid (primary),enterocyte differentiation protocol,2,13M,3 SRR3309664,Hong2017dissociation,M. musculus,GRO-seq,quadriceps muscle (tissue),NaN,1,132M,1 SRR3309665,Hong2017dissociation,M. musculus,GRO-seq,quadriceps muscle (tissue),NaN,1,140M,2 SRR3313817,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),NaN,1,132M,1 SRR3313818,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),NaN,1,140M,2 SRR3313819,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),"treadmill exercise (1hr) , treadmill exercise (1hr) , treadmill exercise (1hr)",1,131M,1 SRR3313820,Sun2017enhancer,M. musculus,GRO-seq,quadriceps muscle (tissue),"treadmill exercise (1hr) , treadmill exercise (1hr) , treadmill exercise (1hr)",1,124M,1 SRR3317155,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,18M,2 SRR3317156,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,11M,4 SRR3317157,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,28M,1 SRR3317158,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,10M,4 SRR3317159,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,22M,1 SRR3317160,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,38M,3 SRR3317161,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,37M,2 SRR3317162,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,37M,2 SRR3317163,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,42M,3 SRR3317164,Liu2013brd4,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,45M,2 SRR3407137,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , rosiglitazone (1hr)",1,24M,3 SRR3407138,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , DMSO/ethanol (1hr)",1,19M,3 SRR3407139,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , rosiglitazone (1hr)",2,22M,3 SRR3407140,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"interleukin-4 (1day) , DMSO/ethanol (1hr)",2,21M,3 SRR3476588,Chen2016cutoff,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,51M,5 SRR3476589,Chen2016cutoff,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,38M,5 SRR3500459,Gibson2016chemical,H. sapiens,GRO-seq,MCF7 (cell line),PJ34 (1hr),1,23M,1 SRR352501,Khodor2011nascent,D. melanogaster,other,S2 (cell line),NaN,1,14M,3 SRR352502,Khodor2011nascent,D. melanogaster,other,S2 (cell line),NaN,2,12M,3 SRR352503,Khodor2011nascent,D. melanogaster,other,S2 (cell line),NaN,1,24M,4 SRR352504,Khodor2011nascent,D. melanogaster,other,S2 (cell line),NaN,2,23M,4 SRR352505,Khodor2011nascent,D. melanogaster,other,head (tissue),NaN,1,18M,2 SRR352506,Khodor2011nascent,D. melanogaster,other,head (tissue),NaN,2,18M,2 SRR3535362,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr)",1,40M,1 SRR3535363,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr) , dexamethasone (1hr)",1,38M,2 SRR3535364,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,43M,2 SRR3535365,Yang2017glucocorticoid,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (1hr) , dexamethasone (1hr)",1,34M,3 SRR354106,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,1,22M,5 SRR3541128,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,49M,3 SRR3541129,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (1hr),1,48M,2 SRR3541130,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,3 SRR3541131,Tan2018dismissal,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (1hr),1,46M,3 SRR3541132,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,75M,2 SRR3541133,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,63M,2 SRR3541134,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 SRR3541135,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,58M,2 SRR3541136,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,58M,2 SRR3541137,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,42M,2 SRR3541138,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,52M,2 SRR3541139,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,32M,2 SRR3546394,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C37 control drug (10min),1,29M,4 SRR3546395,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C37 control drug (10min),2,27M,3 SRR3546396,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C646 CBP inhibitor (10min),1,91M,4 SRR3546397,Boija2017cbp,D. melanogaster,PRO-seq,S2 (cell line),C646 CBP inhibitor (10min),2,35M,3 SRR3555068,Kim2018pluripotency,M. musculus,PRO-cap,ESC (cell line),NaN,1,32M,4 SRR3555069,Kim2018pluripotency,M. musculus,PRO-cap,peritoneal macrophage (primary),NaN,1,16M,5 SRR3619367,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD180 (3hr) , hydroxytamoxifen , interleukin-4 (3hr) , lipopolysaccharide (3hr)",1,197M,3 SRR3619368,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD180 (3hr) , interleukin-4 (3hr) , lipopolysaccharide (3hr)",1,212M,3 SRR3619369,Vian2018energetics,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,213M,3 SRR3633296,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),DMSO (6hr),1,17M,4 SRR3633297,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),DMSO (6hr),2,18M,4 SRR3633298,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),JQ1 (6hr),1,19M,4 SRR3633299,Li2017grid,H. sapiens,GRO-seq,MDA-MB-231 (cell line),JQ1 (6hr),2,18M,4 SRR3647033,Hetzel2016nascent,A. thaliana,GRO-cap,seed (tissue),NaN,1,17M,3 SRR3647034,Hetzel2016nascent,A. thaliana,GRO-seq,seed (tissue),NaN,1,45M,4 SRR3647035,Hetzel2016nascent,A. thaliana,GRO-seq,seed (tissue),NaN,2,50M,3 SRR3657419,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),"DRB (210min) , adeno-Cre virus (4hr)",1,4M,5 SRR3657420,Busslinger2017cohesin,M. musculus,GRO-seq,MEF (cell line),"DRB (210min) , adeno-Cre virus (4hr)",1,18M,2 SRR3679879,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),NaN,1,62M,2 SRR3679880,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),NaN,2,61M,1 SRR3679881,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),NaN,1,67M,2 SRR3679882,Johnson2017biotin,M. musculus,GRO-seq,cortex (tissue),NaN,2,79M,2 SRR3713700,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),DMSO (1hr),1,33M,1 SRR3713701,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (1hr),1,41M,1 SRR3713702,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),MS417 (1hr),1,46M,1 SRR3713703,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),DMSO (3hr),1,40M,1 SRR3713704,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (3hr),1,34M,1 SRR3713705,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),MS417 (3hr),1,52M,1 SRR3713712,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,1,41M,1 SRR3713713,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),NaN,2,54M,2 SRR3713714,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (15min),1,39M,2 SRR3713715,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (15min),2,60M,2 SRR3713716,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (30min),1,44M,2 SRR3713717,Zhao2016high,H. sapiens,PRO-seq,Kasumi-1 (cell line),JQ1 (30min),2,34M,2 SRR3713718,Zhao2016high,H. sapiens,PRO-seq,acute myeloid leukemia cell (primary),DMSO (1hr),1,38M,2 SRR3713719,Zhao2016high,H. sapiens,PRO-seq,acute myeloid leukemia cell (primary),JQ1 (1hr),1,53M,3 SRR3728886,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),"TNF-alpha (2hr) , dihydrotestosterone (2hr)",1,18M,2 SRR3728887,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),"TNF-alpha (2hr) , dihydrotestosterone (2hr)",2,20M,1 SRR3728888,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (2hr),1,22M,1 SRR3728889,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (2hr),2,19M,2 SRR3728890,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),DMSO (2hr),1,18M,2 SRR3728891,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),DMSO (2hr),2,13M,3 SRR3728892,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),TNF-alpha (2hr),1,20M,2 SRR3728893,Malinen2017crosstalk,H. sapiens,GRO-seq,LNCaP (cell line),TNF-alpha (2hr),2,19M,2 SRR3745363,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,48M,3 SRR3745364,Tan2018dismissal,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,43M,2 SRR3923617,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (2hr),1,20M,1 SRR3923618,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (2hr),2,22M,1 SRR3923619,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (30min),1,24M,1 SRR3923620,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (30min),2,24M,1 SRR3923621,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (2hr),1,28M,1 SRR3923622,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),R1881 (2hr),2,22M,1 SRR3996482,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA M1bp (5day),1,32M,3 SRR3996483,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA M1bp (5day),2,37M,3 SRR3996484,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA M1bp (5day) , heat shock (20min)",1,20M,3 SRR3996485,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA M1bp (5day) , heat shock (20min)",2,20M,3 SRR3996486,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),3,30M,3 SRR3996487,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),4,56M,3 SRR3996488,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",3,23M,3 SRR3996489,Duarte2016transcription,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA LacZ (5day) , heat shock (20min)",4,24M,3 SRR4001595,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (4hr),1,15M,3 SRR4001596,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),ethanol (4hr),2,18M,2 SRR4001597,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (4hr),1,16M,2 SRR4001598,Toropainen2016global,H. sapiens,GRO-seq,VCaP (cell line),dihydrotestosterone (4hr),2,19M,2 SRR4012393,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,42M,3 SRR4012413,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",3,55M,1 SRR4012414,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",3,62M,1 SRR4012429,Danko2018dynamic,M. musculus,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,83M,3 SRR4012430,Danko2018dynamic,R. norvegicus,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,84M,2 SRR4019503,Lu2017nascent,P. falciparum,other,early ring parasite (organism),NaN,1,9M,5 SRR4019504,Lu2017nascent,P. falciparum,other,late ring parasite (organism),NaN,1,18M,4 SRR4019505,Lu2017nascent,P. falciparum,other,late ring parasite (organism),NaN,2,20M,4 SRR4019506,Lu2017nascent,P. falciparum,other,early trophozoite parasite (organism),NaN,1,13M,4 SRR4019507,Lu2017nascent,P. falciparum,other,early trophozoite parasite (organism),NaN,1,4M,5 SRR4019508,Lu2017nascent,P. falciparum,other,early trophozoite parasite (organism),NaN,2,10M,4 SRR4019509,Lu2017nascent,P. falciparum,other,late trophozoite parasite (organism),NaN,1,10M,4 SRR4019510,Lu2017nascent,P. falciparum,other,late trophozoite parasite (organism),NaN,1,0M,5 SRR4019511,Lu2017nascent,P. falciparum,other,late trophozoite parasite (organism),NaN,2,24M,4 SRR4019512,Lu2017nascent,P. falciparum,other,early schizont parasite (organism),NaN,1,14M,4 SRR4019513,Lu2017nascent,P. falciparum,other,early schizont parasite (organism),NaN,1,0M,5 SRR4019514,Lu2017nascent,P. falciparum,other,early schizont parasite (organism),NaN,2,23M,4 SRR4019515,Lu2017nascent,P. falciparum,other,late schizont parasite (organism),NaN,1,8M,4 SRR4019516,Lu2017nascent,P. falciparum,other,late schizont parasite (organism),NaN,1,1M,5 SRR4019517,Lu2017nascent,P. falciparum,other,late schizont parasite (organism),NaN,2,14M,4 SRR4019518,Lu2017nascent,P. falciparum,other,gametoyte stage III parasite (organism),NaN,1,5M,5 SRR4019519,Lu2017nascent,P. falciparum,other,gametoyte stage III parasite (organism),NaN,1,16M,3 SRR4041365,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,16M,2 SRR4041366,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,2,13M,3 SRR4041367,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,18M,2 SRR4041368,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,16M,2 SRR4041369,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,16M,3 SRR4041370,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,27M,1 SRR4041371,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,20M,2 SRR4041372,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,22M,2 SRR4041373,Engreitz2016local,M. musculus,PRO-seq,ESC (primary),NaN,1,13M,3 SRR4053664,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,1,85M,1 SRR4053665,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,2,85M,1 SRR4053666,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,3,93M,1 SRR4053667,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,1,88M,1 SRR4053668,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,2,89M,1 SRR4053669,Godfrey2017mll,H. sapiens,other,SEM (cell line),NaN,3,88M,1 SRR408117,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),NaN,1,97M,4 SRR408118,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),influenza A virus Flag-NS1 (12hr),1,90M,3 SRR408119,Marazzi2012suppression,H. sapiens,GRO-seq,A549 (cell line),influenza A virus Flag-deltaPAF (12hr),1,96M,3 SRR4090098,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 SRR4090099,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,137M,3 SRR4090100,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),1,161M,4 SRR4090101,Andrysik2017identification,H. sapiens,GRO-seq,HCT116 (cell line),nutlin-3 (1hr),2,148M,3 SRR4090102,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),1,39M,1 SRR4090103,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),DMSO (1hr),2,48M,1 SRR4090104,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (1hr),1,39M,1 SRR4090105,Andrysik2017identification,H. sapiens,GRO-seq,MCF7 (cell line),nutlin-3 (1hr),2,37M,1 SRR4090106,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),DMSO (1hr),1,45M,1 SRR4090107,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),DMSO (1hr),2,164M,2 SRR4090108,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),nutlin-3 (1hr),1,53M,1 SRR4090109,Andrysik2017identification,H. sapiens,GRO-seq,SJSA (cell line),nutlin-3 (1hr),2,49M,1 SRR4305537,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),1,42M,1 SRR4305538,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),2,44M,1 SRR4305539,Godfrey2017mll,H. sapiens,other,SEM (cell line),DMSO (7day),3,44M,1 SRR4305540,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),1,49M,1 SRR4305541,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),2,51M,1 SRR4305542,Godfrey2017mll,H. sapiens,other,SEM (cell line),pinometostat (7day),3,39M,1 SRR4423740,Akulenko2018transcriptional,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,18M,3 SRR4423741,Akulenko2018transcriptional,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,20M,3 SRR4454567,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),NaN,1,98M,2 SRR4454568,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),NaN,2,35M,1 SRR4454569,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),heat shock (30min),1,130M,2 SRR4454570,Vihervaara2017transcriptional,H. sapiens,PRO-seq,K562 (cell line),heat shock (30min),2,33M,1 SRR4842300,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,190M,4 SRR4842301,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),NaN,2,198M,4 SRR4842302,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),"cell sorting EGFP+ (1hr) , cell sorting EGFP- (1hr) , nocodazole (6hr)",1,185M,4 SRR4842303,Wang2017cell,M. musculus,GRO-seq,splenic B cell (primary),"cell sorting EGFP+ (1hr) , cell sorting EGFP- (1hr) , nocodazole (6hr)",2,160M,4 SRR497911,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,7M,4 SRR497921,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (160min),1,12M,4 SRR5034773,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,20M,3 SRR5034774,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,29M,2 SRR5084317,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),NaN,1,13M,3 SRR5084318,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (30min),1,11M,3 SRR5084319,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (2hr),1,20M,3 SRR5084320,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (4hr),1,15M,3 SRR5084321,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),NaN,2,19M,2 SRR5084322,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (30min),2,21M,2 SRR5084323,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (2hr),2,24M,3 SRR5084324,Schaukowitch2017intrinsic,M. musculus,GRO-seq,cortical neuron (primary),tetrodotoxin (4hr),2,25M,3 SRR5085734,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,46M,1 SRR5085735,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,49M,1 SRR5085736,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),DRB (210min),1,73M,1 SRR5085737,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),"DRB (210min) , ultraviolet C (1s)",1,56M,1 SRR5085738,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),"DRB (210min) , ultraviolet C (1s)",1,55M,1 SRR5085739,Williamson2017uv,H. sapiens,GRO-seq,MRC5VA (cell line),"DRB (210min) , 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gonad (tissue),NaN,1,30M,3 SRR5100759,Meyerswallen2017xx,C. lupus familiaris,ChRO-seq,embryonic gonad (tissue),NaN,2,30M,3 SRR5100760,Meyerswallen2017xx,C. lupus familiaris,ChRO-seq,embryonic gonad (tissue),NaN,1,28M,2 SRR5100761,Meyerswallen2017xx,C. lupus familiaris,ChRO-seq,embryonic gonad (tissue),NaN,1,31M,3 SRR5100762,Meyerswallen2017xx,C. lupus familiaris,ChRO-seq,embryonic gonad (tissue),NaN,2,28M,4 SRR5100763,Meyerswallen2017xx,C. lupus familiaris,ChRO-seq,embryonic gonad (tissue),NaN,2,34M,4 SRR5109935,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HEK293T (cell line),NaN,1,22M,2 SRR5109936,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HEK293T (cell line),NaN,2,22M,1 SRR5109937,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,A549 (cell line),NaN,1,20M,2 SRR5109938,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,ARPE-19 (cell line),NaN,1,19M,2 SRR5109939,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,22M,1 SRR5109940,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,17M,2 SRR5109942,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,MRC5 (cell line),NaN,1,19M,2 SRR5109943,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,NHA (cell line),NaN,1,22M,1 SRR5109944,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,NHA (cell line),NaN,2,20M,1 SRR5109945,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,SKOV3 (cell line),NaN,1,19M,2 SRR5109946,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,T98G (cell line),NaN,1,20M,1 SRR5109947,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,THP1 (cell line),NaN,1,21M,1 SRR5109948,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,U87 (cell line),NaN,1,18M,2 SRR513507,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),1,2M,5 SRR513508,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA LacZ (5day),2,8M,4 SRR513509,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Fcp1 (5day),1,2M,5 SRR513510,Fuda2012fcp1,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Fcp1 (5day),2,10M,4 SRR5144955,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),17-beta-estradiol withdrawal (5day),1,13M,4 SRR5144956,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),17-beta-estradiol withdrawal (5day),2,38M,4 SRR5144957,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),NaN,1,13M,3 SRR5144958,Zhu2017comprehensive,M. musculus,GRO-seq,ECOMG (cell line),NaN,2,34M,3 SRR514959,Schoeberl2012biased,T. thermophila,GRO-seq,micronucleus (tissue),mating (2hr),1,94M,5 SRR5150535,Ngoc2017human,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,8M,4 SRR5150536,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,1,33M,1 SRR5150537,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,2,26M,1 SRR5150538,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,1,33M,1 SRR5150539,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,2,30M,1 SRR5150540,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (40min),1,28M,1 SRR5150541,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,33M,1 SRR5150542,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),hydroxytamoxifen (40min),1,28M,1 SRR5150543,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),ethanol (40min),1,25M,1 SRR5150544,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,28M,1 SRR5150545,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),hydroxytamoxifen (40min),1,33M,1 SRR5150546,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,1,28M,1 SRR5150547,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1hr),1,24M,1 SRR5150548,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1day),1,29M,1 SRR5150549,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,2,28M,1 SRR5150550,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1hr),2,26M,1 SRR5150551,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1day),2,28M,1 SRR5150552,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,1,28M,1 SRR5150553,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1hr),1,30M,1 SRR5150554,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1day),1,26M,1 SRR5150555,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),NaN,2,31M,1 SRR5150556,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1hr),2,24M,1 SRR5150557,Horibata2018erpositive,H. sapiens,PRO-seq,MCF7 (cell line),GDNF (1day),2,30M,1 SRR5195270,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),1,34M,1 SRR5195271,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),2,30M,1 SRR5195272,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),1,31M,1 SRR5195273,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),2,37M,1 SRR5195274,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),1,47M,1 SRR5195275,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),2,35M,1 SRR5195276,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),1,34M,1 SRR5195277,Agarwal2021kdm1a,M. musculus,other,cortical neuron (primary),bromouridine (32min),2,41M,1 SRR5195548,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,1,46M,1 SRR5195549,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,2,65M,2 SRR5195550,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,1,49M,2 SRR5195551,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,2,48M,1 SRR5227979,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),charcoal-stripped FBS (3day),1,28M,1 SRR5227980,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),charcoal-stripped FBS (3day),2,29M,1 SRR5227981,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),"thymidine (17hr) , thymidine (18hr)",1,26M,1 SRR5227982,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),"thymidine (17hr) , thymidine (18hr)",2,35M,1 SRR5227983,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),"nocodazole (12hr) , thymidine (1day)",1,29M,1 SRR5227985,Liu2017transcriptional,H. sapiens,GRO-seq,MCF7 (cell line),"nocodazole (12hr) , thymidine (1day)",2,38M,1 SRR5253457,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),NaN,1,6M,4 SRR5253460,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),NaN,2,15M,2 SRR5253461,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),NaN,3,19M,2 SRR5253462,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),NaN,4,15M,2 SRR5253465,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),1,6M,4 SRR5253468,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),2,15M,2 SRR5253469,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),3,17M,2 SRR5253470,Niskanen2018endothelial,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),4,13M,3 SRR5274970,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),1,13M,4 SRR5274971,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),2,22M,1 SRR5274972,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),3,18M,3 SRR5274973,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),4,33M,1 SRR5274974,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),1,14M,4 SRR5274975,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),2,15M,2 SRR5274976,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),3,21M,3 SRR5274977,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),4,24M,1 SRR5274978,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),1,19M,3 SRR5274979,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),2,17M,2 SRR5274980,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),3,28M,2 SRR5274981,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),4,27M,1 SRR5274982,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),1,17M,4 SRR5274983,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),2,16M,2 SRR5274984,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),3,27M,3 SRR5274985,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),ethanol (45min),4,28M,1 SRR5274986,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),1,11M,5 SRR5274987,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),2,19M,3 SRR5274988,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),3,17M,4 SRR5274989,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (20min),4,29M,1 SRR5274990,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),1,22M,4 SRR5274991,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),2,17M,4 SRR5274992,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),3,32M,3 SRR5274993,Murakami2017dynamic,H. sapiens,GRO-seq,MDA-MB-231 (cell line),17-beta-estradiol (45min),4,28M,3 SRR5298791,Incarnato2017vivo,E. coli,other,whole bacteria (organism),NaN,1,21M,5 SRR5313794,Liu2018arabidopsis,A. thaliana,GRO-seq,seedling (tissue),NaN,1,52M,5 SRR5313795,Liu2018arabidopsis,A. thaliana,GRO-seq,seedling (tissue),NaN,2,39M,4 SRR5313796,Liu2018arabidopsis,A. thaliana,GRO-seq,seedling (tissue),NaN,1,39M,4 SRR5313797,Liu2018arabidopsis,A. thaliana,GRO-seq,seedling (tissue),NaN,2,40M,4 SRR531824,Wang2014rna,H. sapiens,GRO-seq,B cell (cell line),NaN,1,162M,2 SRR531825,Wang2014rna,H. sapiens,GRO-seq,B cell (cell line),NaN,1,169M,2 SRR531826,Wang2014rna,H. sapiens,PRO-seq,B cell (cell line),NaN,1,78M,4 SRR5350746,Slobodin2017transcription,H. sapiens,GRO-seq,BJ (cell line),NaN,1,22M,1 SRR5350747,Slobodin2017transcription,H. sapiens,GRO-seq,BJ (cell line),NaN,2,31M,1 SRR5350748,Slobodin2017transcription,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,10M,4 SRR5350749,Slobodin2017transcription,H. sapiens,GRO-seq,MCF7 (cell line),NaN,2,10M,4 SRR5359616,Phanstiel2017static,H. sapiens,PRO-seq,THP1 (cell line),NaN,1,24M,4 SRR5359617,Phanstiel2017static,H. sapiens,PRO-seq,THP1 (cell line),NaN,2,17M,4 SRR5359618,Phanstiel2017static,H. sapiens,PRO-seq,THP1 (cell line),phorbol myristate acetate (3day),1,15M,4 SRR5359619,Phanstiel2017static,H. sapiens,PRO-seq,THP1 (cell line),phorbol myristate acetate (3day),2,21M,4 SRR5364061,Franco2018enhancer,H. sapiens,GRO-seq,MCF7 (cell line),NaN,2,27M,1 SRR5364072,Franco2018enhancer,H. sapiens,GRO-seq,UACC812 (cell line),NaN,2,60M,2 SRR5364303,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),DMSO,1,31M,1 SRR5364304,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),DMSO,2,32M,1 SRR5364305,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (10min),1,31M,1 SRR5364306,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (10min),2,29M,1 SRR5364307,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (20min),1,29M,1 SRR5364308,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (20min),2,26M,1 SRR5364309,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (40min),1,32M,1 SRR5364310,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (40min),2,35M,1 SRR5364311,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (1hr),1,36M,1 SRR5364312,Dukler2017nascent,H. sapiens,PRO-seq,K562 (cell line),celastrol (1hr),2,28M,1 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SRR592727,Saunders2013extensive,D. melanogaster,GRO-seq,embryo (tissue),gestation (3hr),1,2M,5 SRR592728,Saunders2013extensive,D. melanogaster,GRO-seq,embryo (tissue),gestation (3hr),2,2M,5 SRR5929958,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",1,13M,3 SRR5929959,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",2,14M,3 SRR5929960,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",1,12M,4 SRR5929961,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",2,15M,4 SRR5929962,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",1,11M,4 SRR5929963,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",2,14M,4 SRR5929964,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",1,12M,4 SRR5929965,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",2,10M,4 SRR5929966,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),DMSO (5min),1,11M,4 SRR5929967,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),DMSO (5min),2,17M,4 SRR5929968,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),3MB-PP1 (5min),1,12M,4 SRR5929969,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),3MB-PP1 (5min),2,11M,4 SRR5929970,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",1,10M,4 SRR5929971,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , DMSO (5min)",2,11M,4 SRR5929972,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",1,12M,4 SRR5929973,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),"cold stress (15min) , 3MB-PP1 (5min)",2,12M,4 SRR5929974,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),DMSO (5min),1,11M,4 SRR5929975,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),DMSO (5min),2,15M,4 SRR5929976,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),3MB-PP1 (5min),1,13M,4 SRR5929977,Parua2018cdk9-pp1,S. pombe,PRO-seq,whole yeast (organism),3MB-PP1 (5min),2,13M,4 SRR5944047,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),NaN,1,24M,1 SRR5944048,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),NaN,2,18M,2 SRR6008469,Kuosmanen2018nrf2,H. sapiens,GRO-seq,HUVEC (primary),NaN,1,15M,2 SRR6008470,Kuosmanen2018nrf2,H. sapiens,GRO-seq,HUVEC (primary),oxPAPC (6hr),1,12M,3 SRR6026781,Woo2018ted,H. sapiens,PRO-seq,HEK293 (cell line),DMSO (2hr),1,52M,1 SRR6026782,Woo2018ted,H. sapiens,PRO-seq,HEK293 (cell line),DMSO (2hr),2,25M,1 SRR6026783,Woo2018ted,H. sapiens,PRO-seq,HEK293 (cell line),thapsigargin (2hr),1,50M,1 SRR6026784,Woo2018ted,H. sapiens,PRO-seq,HEK293 (cell line),thapsigargin (2hr),2,60M,1 SRR6069044,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,31M,3 SRR6069045,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,27M,2 SRR609665,Sienski2012transcriptional,D. melanogaster,GRO-seq,ovarian somatic cell (cell line),NaN,1,60M,4 SRR609666,Sienski2012transcriptional,D. melanogaster,GRO-seq,ovarian somatic cell (cell line),NaN,1,33M,3 SRR611828,Kwak2013precise,D. melanogaster,PRO-seq,S2 (cell line),NaN,2,8M,4 SRR611831,Kwak2013precise,D. melanogaster,PRO-seq,whole fly (organism),NaN,1,40M,4 SRR611832,Kwak2013precise,D. melanogaster,PRO-seq,whole fly (organism),NaN,1,37M,4 SRR611833,Kwak2013precise,D. melanogaster,PRO-seq,whole fly (organism),NaN,1,37M,4 SRR6128874,Trizzino2018tumor,H. sapiens,GRO-seq,RMG1 (cell line),NaN,1,112M,2 SRR6128875,Trizzino2018tumor,H. sapiens,GRO-seq,RMG1 (cell line),doxycycline (3day),1,119M,4 SRR6145792,Trizzino2018tumor,H. sapiens,GRO-seq,RMG1 (cell line),NaN,2,17M,5 SRR6145793,Trizzino2018tumor,H. sapiens,GRO-seq,RMG1 (cell line),doxycycline (3day),2,25M,4 SRR618498,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA control,1,20M,3 SRR618499,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA control,2,20M,3 SRR618500,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA Rad21,1,22M,3 SRR618501,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA Rad21,2,23M,3 SRR618502,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA Nipped-B,1,21M,3 SRR618503,Schaaf2013genome,D. melanogaster,PRO-seq,ML-DmBG3-c2 (cell line),dsRNA Nipped-B,2,27M,3 SRR620530,Hu2012dicer,H. sapiens,GRO-seq,NTera2/D1 (cell line),NaN,1,9M,4 SRR620531,Hu2012dicer,H. sapiens,GRO-seq,NTera2/D1 (cell line),retinoic acid (2day),1,29M,1 SRR6205688,Sen2019histone,H. sapiens,PRO-seq,IMR90 (cell line),NaN,1,36M,2 SRR6205689,Sen2019histone,H. sapiens,PRO-seq,IMR90 (cell line),replicatively passaging until senescent,1,31M,2 SRR6216702,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),1,54M,1 SRR6216703,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),2,47M,1 SRR6216704,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),3,36M,1 SRR6216705,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),1,47M,1 SRR6216706,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),2,70M,1 SRR6216707,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),3,40M,1 SRR6216708,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),1,44M,1 SRR6216709,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),2,51M,1 SRR6216710,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),HSV-1 (3hr),3,58M,1 SRR6216711,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),1,39M,1 SRR6216712,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),2,54M,1 SRR6216713,Birkenheuer2018herpes,H. sapiens,GRO-seq,HEp2 (cell line),mock infection medium (3hr),3,45M,1 SRR6246979,Czimmerer2018transcription,M. musculus,GRO-seq,bone marrow derived macrophage (primary),interleukin-4 (1hr),1,36M,4 SRR6247018,Czimmerer2018transcription,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,37M,4 SRR6347627,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 1,6-hexanediol (5min)",1,33M,1 SRR6347628,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"1,6-hexanediol (5min) , 17-beta-estradiol (30min)",1,26M,1 SRR6347629,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 2,5-hexanediol (5min)",1,27M,1 SRR6347630,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (30min) , 2,5-hexanediol (5min)",1,28M,1 SRR6376814,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,3,36M,3 SRR639050,Jin2013high,H. sapiens,GRO-seq,IMR90 (cell line),NaN,1,77M,2 SRR639051,Jin2013high,H. sapiens,GRO-seq,IMR90 (cell line),TNF-alpha (1hr),1,82M,2 SRR639125,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,1,6M,4 SRR639126,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,2,33M,1 SRR639127,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,1,37M,1 SRR639128,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,2,40M,1 SRR639129,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,1,38M,2 SRR639130,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,2,28M,1 SRR639131,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),starvation (1day),1,11M,3 SRR639132,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),starvation (1day),2,31M,1 SRR639133,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,1,32M,2 SRR639134,Kruesi2013condensin,C. elegans,GRO-seq,whole worm (organism),NaN,2,48M,2 SRR639142,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,59M,4 SRR639143,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,20M,4 SRR639144,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,49M,4 SRR639145,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,18M,4 SRR639146,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,60M,5 SRR639147,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,15M,4 SRR639148,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,56M,4 SRR639149,Kruesi2013condensin,C. elegans,GRO-cap,whole worm (organism),NaN,1,22M,4 SRR6453429,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (1hr) , high fat diet (12day)",1,99M,4 SRR6453430,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (4hr) , high fat diet (12day)",1,160M,4 SRR6453431,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (7hr) , high fat diet (12day)",1,135M,4 SRR6453432,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (10hr) , high fat diet (12day)",1,134M,4 SRR6453433,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,60M,3 SRR6453434,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,132M,4 SRR6453435,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,132M,4 SRR6453436,Guan2018diet,M. musculus,GRO-seq,liver (tissue),"light cycle (12hr) , high fat diet (12day)",1,117M,4 SRR646576,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,16M,3 SRR646577,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,18M,3 SRR646578,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,16M,3 SRR646579,Rozhkov2013multiple,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,15M,3 SRR6492219,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),1,88M,4 SRR6492220,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",1,38M,3 SRR6492221,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",1,92M,4 SRR6492222,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),2,64M,3 SRR6492223,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",2,50M,3 SRR6492224,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",2,67M,3 SRR6492225,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),1,40M,3 SRR6492226,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",1,60M,4 SRR6492227,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",1,116M,4 SRR6492228,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),hydroxytamoxifen (3day),2,59M,3 SRR6492229,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (1hr)",2,52M,2 SRR6492230,Cuartero2020control,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"hydroxytamoxifen (3day) , lipopolysaccharide (6hr)",2,44M,2 SRR6498830,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,79M,1 SRR6498831,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,95M,2 SRR6498832,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,126M,2 SRR6498833,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,80M,1 SRR6498834,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,95M,2 SRR6498835,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,125M,1 SRR6498836,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),1,94M,1 SRR6498837,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),2,114M,2 SRR6498838,Weissmiller2019inhibition,H. sapiens,PRO-seq,G401 (cell line),doxycycline (1day),3,118M,3 SRR6508247,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),NaN,1,43M,3 SRR6508248,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),FCCP (3hr),1,35M,3 SRR6508249,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),NaN,1,30M,4 SRR6508250,Cardamone2018mitochondrial,M. musculus,GRO-seq,3T3-L1 (cell line),FCCP (3hr),1,41M,4 SRR6660158,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,10M,4 SRR6660159,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,15M,4 SRR6660160,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,12M,4 SRR6660161,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,2,20M,4 SRR6660174,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,48M,2 SRR6660175,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,52M,4 SRR6660176,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,58M,1 SRR6660177,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,74M,3 SRR6660226,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,49M,2 SRR6660227,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,90M,1 SRR6660228,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,46M,1 SRR6660229,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,47M,1 SRR6660276,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,34M,2 SRR6660277,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,13M,3 SRR6660278,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,30M,1 SRR6660279,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,12M,3 SRR6660292,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,59M,2 SRR6660293,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,42M,2 SRR6660300,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,7M,5 SRR6660301,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,42M,3 SRR6660302,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,1M,5 SRR6660303,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,2,39M,2 SRR6660316,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,34M,2 SRR6660317,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,104M,4 SRR6660318,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,52M,1 SRR6660319,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,90M,4 SRR6660349,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,48M,3 SRR6660350,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,7M,4 SRR6660351,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,7M,4 SRR6660352,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,2,34M,2 SRR6660365,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,51M,1 SRR6660366,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,107M,2 SRR6660367,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,47M,2 SRR6660368,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,35M,1 SRR6660399,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,5M,5 SRR6660400,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,8M,4 SRR6660401,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,11M,4 SRR6660402,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,2,9M,4 SRR6660416,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,55M,3 SRR6660417,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),2,28M,1 SRR6660418,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,45M,2 SRR6660419,Link2018analysis,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,2,0M,5 SRR6661081,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,1,None,0 SRR6661082,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,2,None,0 SRR6661083,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,1,None,0 SRR6661084,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,2,None,0 SRR6661086,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,2,None,0 SRR6661087,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,1,None,0 SRR6661088,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,2,None,0 SRR6687446,Daniel2018nuclear,M. musculus,GRO-seq,bone marrow derived macrophage (primary),"LG100268 (1hr) , interleukin-4 (1day)",1,22M,3 SRR6727862,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,43M,4 SRR6727863,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,2,17M,3 SRR6727864,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,46M,4 SRR6727865,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,2,19M,3 SRR6727866,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,46M,4 SRR6727867,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,2,18M,3 SRR6727868,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,33M,4 SRR6727869,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,2,28M,4 SRR6727870,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell 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SRR6727881,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,2,27M,3 SRR6727882,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,28M,4 SRR6727883,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727884,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,43M,4 SRR6727885,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,51M,4 SRR6727886,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,43M,4 SRR6727887,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,45M,4 SRR6727888,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,51M,4 SRR6727889,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727890,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727891,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,41M,4 SRR6727892,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,44M,4 SRR6727893,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727894,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,55M,4 SRR6727895,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,48M,3 SRR6727896,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,53M,4 SRR6727897,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,45M,4 SRR6727898,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,48M,4 SRR6727899,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,48M,4 SRR6727900,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,51M,4 SRR6727901,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,50M,4 SRR6727902,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,45M,4 SRR6727903,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,58M,4 SRR6727904,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727905,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727906,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727907,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,48M,4 SRR6727908,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,57M,4 SRR6727909,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,48M,4 SRR6727910,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727911,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,42M,4 SRR6727912,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,62M,4 SRR6727913,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,54M,4 SRR6727914,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,75M,4 SRR6727915,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727916,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,61M,4 SRR6727917,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,50M,4 SRR6727918,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,52M,4 SRR6727919,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,69M,5 SRR6727920,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,43M,4 SRR6727921,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,45M,4 SRR6727922,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,53M,4 SRR6727923,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,37M,4 SRR6727924,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727925,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,41M,4 SRR6727926,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,41M,4 SRR6727927,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,51M,4 SRR6727928,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,39M,4 SRR6727929,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727930,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,40M,4 SRR6727931,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,44M,4 SRR6727932,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,58M,4 SRR6727933,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,41M,4 SRR6727934,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727935,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,44M,4 SRR6727936,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,49M,4 SRR6727937,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,53M,4 SRR6727938,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,34M,4 SRR6727939,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,43M,4 SRR6727940,Kristjansdottir2020population,H. sapiens,PRO-cap,lymphoblast (cell line),NaN,1,47M,4 SRR6727941,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,31M,1 SRR6727942,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,33M,1 SRR6727943,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,23M,1 SRR6727944,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,34M,1 SRR6727945,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,34M,1 SRR6727946,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,3,16M,2 SRR6727947,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,25M,1 SRR6727948,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,36M,1 SRR6727949,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,3,19M,2 SRR6727950,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,28M,1 SRR6727951,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,19M,2 SRR6727952,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,19M,2 SRR6727953,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,21M,1 SRR6727954,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,25M,1 SRR6727955,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,37M,1 SRR6727956,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,20M,2 SRR6727957,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,16M,2 SRR6727958,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,1,21M,1 SRR6727959,Kristjansdottir2020population,H. sapiens,PRO-seq,lymphoblast (cell line),NaN,2,28M,1 SRR6780907,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",4,46M,1 SRR6780908,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",4,43M,1 SRR6780909,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",3,52M,1 SRR6780910,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",3,46M,1 SRR6782092,Nelson2018ppar,M. musculus,GRO-seq,peritoneal macrophage (primary),DMSO (1day),1,147M,3 SRR6782093,Nelson2018ppar,M. musculus,GRO-seq,peritoneal macrophage (primary),rosiglitazone (1day),1,55M,1 SRR6782094,Nelson2018ppar,M. musculus,GRO-seq,peritoneal macrophage (primary),rosiglitazone (1day),2,65M,2 SRR6782095,Nelson2018ppar,M. musculus,GRO-seq,peritoneal macrophage (primary),rosiglitazone (1day),3,26M,2 SRR6782096,Nelson2018ppar,M. musculus,GRO-seq,peritoneal macrophage (primary),DMSO (1day),2,62M,2 SRR6789175,Jiang2018multi,H. sapiens,GRO-seq,HCT116 (cell line),NaN,1,41M,2 SRR6789176,Jiang2018multi,H. sapiens,GRO-seq,HCT116 (cell line),NaN,2,54M,1 SRR6794626,Vian2018energetics,M. musculus,other,PCT 7134 (cell line),NaN,1,89M,2 SRR6794627,Vian2018energetics,M. musculus,other,PCT 7134 (cell line),NaN,2,104M,3 SRR6794628,Vian2018energetics,M. musculus,other,PCT 7134 (cell line),NaN,1,115M,2 SRR6794629,Vian2018energetics,M. musculus,other,PCT 7134 (cell line),NaN,2,101M,2 SRR6808881,Wang2018nascent,M. musculus,PRO-seq,liver (tissue),NaN,1,42M,1 SRR6808882,Wang2018nascent,M. musculus,PRO-seq,liver (tissue),NaN,2,52M,1 SRR6808883,Wang2018nascent,M. musculus,PRO-seq,liver (tissue),NaN,1,47M,1 SRR6808884,Wang2018nascent,M. musculus,PRO-seq,liver (tissue),NaN,2,30M,1 SRR6825349,Bonelt2019precocious,M. musculus,GRO-seq,splenic B cell (primary),cell sorting CD23+,1,34M,2 SRR6825350,Bonelt2019precocious,M. musculus,GRO-seq,splenic B cell (primary),cell sorting CD23+,1,33M,2 SRR6825351,Bonelt2019precocious,M. musculus,GRO-seq,pro B cell (primary),cell sorting CD19+,1,30M,2 SRR6825352,Bonelt2019precocious,M. musculus,GRO-seq,pro B cell (primary),cell sorting CD19+,2,35M,1 SRR6837045,Fonseca2019diverse,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,10M,4 SRR6837046,Fonseca2019diverse,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),2,9M,4 SRR6837047,Fonseca2019diverse,M. musculus,GRO-seq,peritoneal macrophage (primary),PBS (1hr),1,13M,3 SRR6837048,Fonseca2019diverse,M. musculus,GRO-seq,peritoneal macrophage (primary),PBS (1hr),2,14M,3 SRR6874223,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,5,36M,3 SRR6874225,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,24M,4 SRR6874227,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,21M,4 SRR6874228,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,22M,4 SRR6874230,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,24M,3 SRR6874233,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,27M,3 SRR6874234,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,21M,4 SRR6874235,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,27M,3 SRR6874236,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,26M,3 SRR6874238,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,27M,3 SRR6904125,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,1,11M,3 SRR6904126,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,2,10M,3 SRR6904127,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,3,16M,2 SRR6904128,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,4,39M,1 SRR6904129,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),heat shock (90min),1,12M,3 SRR6904130,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),heat shock (90min),2,11M,3 SRR6904131,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),heat shock (90min),3,19M,2 SRR6904132,Aprile-garcia2019nascent,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),heat shock (90min),4,35M,1 SRR6927837,Liang2018targeting,H. sapiens,PRO-seq,HEK293T (cell line),KL-2 (6hr),1,38M,1 SRR6927838,Liang2018targeting,H. sapiens,PRO-seq,HEK293T (cell line),KL-1 (6hr),1,36M,1 SRR6927839,Liang2018targeting,H. sapiens,PRO-seq,HEK293T (cell line),DMSO (6hr),1,43M,1 SRR6936827,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),Kdo2-Lipid A (1hr),1,22M,4 SRR6936828,Link2018analysis,M. musculus,GRO-cap,bone marrow derived macrophage (primary),NaN,1,26M,4 SRR7010982,Fei2018ndf,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,64M,2 SRR7010983,Fei2018ndf,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,76M,2 SRR7010984,Fei2018ndf,H. sapiens,GRO-seq,HeLa (cell line),NaN,2,66M,2 SRR7041686,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , Mock infection (4hr)",1,64M,2 SRR7041689,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , Mock infection (90min)",1,29M,2 SRR7041690,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , Mock infection (90min)",1,35M,2 SRR7128402,Parikh2018critical,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,23M,4 SRR7128403,Parikh2018critical,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,16M,3 SRR7128404,Parikh2018critical,D. melanogaster,GRO-seq,ovary (tissue),NaN,1,21M,3 SRR7128405,Parikh2018critical,D. melanogaster,GRO-seq,ovary (tissue),NaN,2,25M,3 SRR7184284,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),NaN,2,19M,2 SRR7184285,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),myotube differentiation protocol (2day),2,40M,2 SRR7184286,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),NaN,2,54M,2 SRR7184287,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),myotube differentiation protocol (2day),2,36M,2 SRR7195584,Lozano2018rna,M. esculenta,PRO-seq,shoot (tissue),NaN,1,84M,3 SRR7195585,Lozano2018rna,Z. mays,PRO-seq,shoot (tissue),NaN,1,16M,2 SRR7266931,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),DMSO (1hr),1,36M,1 SRR7266932,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),DMSO (1hr),2,19M,2 SRR7266933,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (15min),1,41M,1 SRR7266934,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (15min),2,39M,1 SRR7266935,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (30min),1,40M,1 SRR7266936,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (30min),2,36M,1 SRR7266937,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (1hr),1,41M,1 SRR7266938,Aho2019displacement,H. sapiens,PRO-seq,MV4-11 (cell line),C3 (1hr),2,32M,1 SRR7290015,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,28M,3 SRR7290016,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,31M,3 SRR7290017,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,26M,2 SRR7290018,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,24M,2 SRR7290019,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,34M,2 SRR7290020,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,40M,2 SRR7290021,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,40M,2 SRR7290022,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,44M,2 SRR7290023,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),3,43M,3 SRR7290024,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),3,45M,4 SRR7290025,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),3,45M,4 SRR7290026,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),3,72M,3 SRR7290027,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,44M,2 SRR7290028,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,2 SRR7290029,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,48M,3 SRR7290030,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,39M,2 SRR7290031,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,58M,2 SRR7290032,Oh2021enhancer,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,53M,2 SRR7300121,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,1,29M,1 SRR7300122,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,2,30M,1 SRR7300123,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),1,21M,1 SRR7300124,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),2,35M,1 SRR7300125,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,1,35M,1 SRR7300126,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,2,31M,1 SRR7300127,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),1,38M,1 SRR7300128,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),2,38M,1 SRR7413428,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),doxycycline (3day),1,31M,1 SRR7413429,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),doxycycline withdrawal (3day),1,25M,1 SRR7413430,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (5min) , doxycycline (3day)",1,27M,2 SRR7413431,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (5min) , doxycycline withdrawal (3day)",1,33M,1 SRR7413432,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (15min) , doxycycline (3day)",1,32M,2 SRR7413433,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (15min) , doxycycline withdrawal (3day)",1,30M,1 SRR7413434,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (30min) , doxycycline (3day)",1,37M,3 SRR7413435,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (30min) , doxycycline withdrawal (3day)",1,32M,1 SRR7413436,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),doxycycline (3day),2,25M,1 SRR7413437,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),doxycycline withdrawal (3day),2,27M,1 SRR7413438,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (5min) , doxycycline (3day)",2,24M,1 SRR7413439,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (5min) , doxycycline withdrawal (3day)",2,27M,2 SRR7413440,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (15min) , doxycycline (3day)",2,28M,2 SRR7413441,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (15min) , doxycycline withdrawal (3day)",2,25M,1 SRR7413442,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (30min) , doxycycline (3day)",2,27M,3 SRR7413443,Hou2019paf1c,M. musculus,PRO-seq,C2C12 (cell line),"DRB (30min) , doxycycline withdrawal (3day)",2,24M,2 SRR7458416,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,4M,5 SRR7458417,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,19M,2 SRR7458418,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,5M,5 SRR7458425,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,22M,2 SRR7458426,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,22M,2 SRR7458427,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,13M,4 SRR7458428,Tome2018single,M. musculus,other,MEF (cell line),NaN,1,32M,4 SRR7458429,Tome2018single,M. musculus,other,MEF (cell line),heat shock (1hr),1,37M,4 SRR7518307,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,1,36M,3 SRR7518308,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,2,37M,4 SRR7518309,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,1,38M,3 SRR7518310,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,2,34M,3 SRR7518311,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,1,33M,3 SRR7518312,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,2,36M,3 SRR7518313,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),1,20M,4 SRR7518314,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),2,22M,4 SRR7518315,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),1,20M,4 SRR7518316,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),2,17M,4 SRR7518317,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),1,35M,3 SRR7518318,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),2,28M,3 SRR7518319,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),1,33M,4 SRR7518320,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),2,25M,4 SRR7518321,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),1,32M,3 SRR7518322,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),DMSO (1hr),2,33M,3 SRR7518323,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),1,42M,4 SRR7518324,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),flavopiridol (1hr),2,27M,4 SRR7519708,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),NaN,1,15M,3 SRR7519709,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),NaN,2,19M,2 SRR7519710,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 1,1,17M,2 SRR7519711,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 1,2,19M,2 SRR7519712,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 1,3,19M,2 SRR7519713,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,1,17M,2 SRR7519714,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,2,22M,2 SRR7519715,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,1,25M,1 SRR7519716,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,2,32M,1 SRR7519717,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,1,25M,2 SRR7519718,Viiri2019extensive,H. sapiens,GRO-seq,iPSC (cell line),hepatocyte differentiation protocol 2,2,29M,1 SRR7519719,Viiri2019extensive,H. sapiens,GRO-seq,hepatocyte (primary),NaN,1,15M,4 SRR7519720,Viiri2019extensive,H. sapiens,GRO-seq,hepatocyte (primary),NaN,2,32M,2 SRR7550986,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 2,5-hexanediol (5min)",1,45M,1 SRR7550987,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"2,5-hexanediol (5min) , TNF-alpha (30min)",1,50M,1 SRR7550988,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ethanol (30min) , 1,6-hexanediol (5min)",1,48M,3 SRR7550989,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"1,6-hexanediol (5min) , TNF-alpha (30min)",1,52M,2 SRR7550990,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"2,5-hexanediol (5min) , ethanol (14hr)",1,55M,1 SRR7550991,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (14hr) , 2,5-hexanediol (5min)",1,55M,1 SRR7550992,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"1,6-hexanediol (5min) , 17-beta-estradiol (14hr)",1,52M,2 SRR7550993,Nair2019phase,M. musculus,GRO-seq,RAW264.7 (cell line),"2,5-hexanediol (5min)",1,51M,2 SRR7550994,Nair2019phase,M. musculus,GRO-seq,RAW264.7 (cell line),"2,5-hexanediol (30min) , Kdo2-Lipid A (5min)",1,52M,2 SRR7550995,Nair2019phase,M. musculus,GRO-seq,RAW264.7 (cell line),"1,6-hexanediol (5min)",1,48M,3 SRR7550996,Nair2019phase,M. musculus,GRO-seq,RAW264.7 (cell line),"1,6-hexanediol (30min) , Kdo2-Lipid A (5min)",1,49M,3 SRR7616132,Chu2018chromatin,H. sapiens,PRO-seq,Jurkat T cell (cell line),NaN,1,25M,1 SRR7616133,Chu2018chromatin,H. sapiens,ChRO-seq,Jurkat T cell (cell line),NaN,1,25M,1 SRR7616134,Chu2018chromatin,H. sapiens,ChRO-seq,Jurkat T cell (cell line),NaN,2,42M,1 SRR7616135,Chu2018chromatin,H. sapiens,other,Jurkat T cell (cell line),NaN,1,40M,1 SRR7621275,Perreault2019epigenetic,H. sapiens,PRO-seq,HCC1806 (cell line),DMSO (4hr),1,58M,5 SRR7621281,Perreault2019epigenetic,H. sapiens,PRO-seq,HCC1806 (cell line),DMSO (4hr),2,42M,2 SRR7638782,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,1,49M,2 SRR7638783,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),NaN,2,35M,1 SRR7638784,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),1,31M,1 SRR7638785,Lloret-llinares2018rna,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),2,27M,1 SRR7692104,Moreau2018transcriptional,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),1,15M,2 SRR7692105,Moreau2018transcriptional,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),1,17M,3 SRR7692106,Moreau2018transcriptional,H. sapiens,GRO-seq,HUVEC (primary),hypoxia (8hr),1,18M,2 SRR7722984,Delgado-benito2018chromatin,M. musculus,GRO-seq,B cell (primary),"interleukin-4 (1day) , lipopolysaccharide (1day)",1,148M,3 SRR7722985,Delgado-benito2018chromatin,M. musculus,GRO-seq,B cell (primary),"interleukin-4 (1day) , lipopolysaccharide (1day)",2,158M,3 SRR7722986,Delgado-benito2018chromatin,M. musculus,GRO-seq,B cell (primary),"interleukin-4 (1day) , lipopolysaccharide (1day)",1,113M,3 SRR7746892,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,1,84M,4 SRR7746893,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,2,35M,4 SRR7746894,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,1,82M,4 SRR7746895,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,2,81M,4 SRR7746896,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,1,83M,4 SRR7746897,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,2,76M,4 SRR7746898,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,1,112M,4 SRR7746899,Zhang2018timing,H. sapiens,other,KBM7 (cell line),NaN,2,86M,4 SRR7824015,Alexander2019imprinted,M. musculus,PRO-seq,liver (tissue),NaN,1,148M,2 SRR7824016,Alexander2019imprinted,M. musculus,PRO-seq,liver (tissue),NaN,2,135M,3 SRR7824017,Alexander2019imprinted,M. musculus,PRO-seq,yolk sac (tissue),NaN,1,144M,2 SRR7824018,Alexander2019imprinted,M. musculus,PRO-seq,yolk sac (tissue),NaN,2,59M,2 SRR7868785,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,7M,4 SRR7868786,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,11M,4 SRR7868787,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,7M,4 SRR7868788,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,10M,4 SRR7868789,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,9M,4 SRR7868790,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,11M,4 SRR7868791,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,18M,4 SRR7868792,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,10M,4 SRR7868793,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,10M,4 SRR7868794,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,12M,4 SRR7868795,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,11M,4 SRR7868796,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,10M,4 SRR7868797,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,7M,4 SRR7868798,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,13M,4 SRR7868799,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,3,17M,3 SRR7868800,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,4,18M,3 SRR7868801,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,17M,4 SRR7868802,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,18M,4 SRR7868803,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,17M,4 SRR7868804,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,15M,4 SRR7868805,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,17M,3 SRR7868806,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,18M,3 SRR7868807,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,17M,4 SRR7868808,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,18M,3 SRR7868809,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,16M,3 SRR7868810,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,17M,3 SRR7868811,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,16M,4 SRR7868812,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,17M,4 SRR7868813,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,15M,3 SRR7868814,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,17M,3 SRR7868815,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,19M,3 SRR7868816,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,18M,3 SRR7868817,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,5,28M,4 SRR7868818,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,6,28M,4 SRR7868819,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,1,33M,4 SRR7868820,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,2,25M,4 SRR7868821,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,3,32M,4 SRR7868822,Xiao2019pervasive,H. sapiens,GRO-seq,HepG2 (cell line),NaN,4,31M,4 SRR7879124,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , dimethyloxalylglycine (16hr) , doxycycline (1day)",1,18M,2 SRR7879125,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , dimethyloxalylglycine (16hr) , doxycycline (1day)",2,17M,2 SRR7879126,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , doxycycline (1day)",1,12M,3 SRR7879127,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , doxycycline (1day)",2,28M,1 SRR7879128,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , dimethyloxalylglycine (16hr) , water (1day)",1,10M,3 SRR7879129,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , dimethyloxalylglycine (16hr) , water (1day)",2,13M,3 SRR7879130,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , water (1day)",1,10M,4 SRR7879131,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"bromouridine (30min) , water (1day)",1,27M,1 SRR7879132,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (10min) , doxycycline (1day)",1,11M,3 SRR7879133,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (20min) , doxycycline (1day)",1,13M,3 SRR7879134,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (5min) , doxycycline (1day)",1,10M,3 SRR7879135,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (10min) , water (1day)",1,11M,3 SRR7879136,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (20min) , water (1day)",1,9M,4 SRR7879137,Sheridan2019widespread,H. sapiens,other,HEK293T Flp-In (cell line),"DRB (3hr) , bromouridine (5min) , water (1day)",1,8M,4 SRR797530,Ji2013sr,M. musculus,GRO-seq,MEF (primary),NaN,1,12M,3 SRR797531,Ji2013sr,M. musculus,GRO-seq,MEF (primary),doxycycline (4day),1,8M,4 SRR797532,Ji2013sr,M. musculus,GRO-seq,MEF (primary),NaN,1,18M,3 SRR797533,Ji2013sr,M. musculus,GRO-seq,MEF (primary),doxycycline (2day),1,21M,4 SRR797534,Ji2013sr,M. musculus,GRO-seq,MEF (primary),NaN,1,23M,4 SRR797535,Ji2013sr,M. musculus,GRO-seq,MEF (primary),DRB (3hr),1,23M,5 SRR7988484,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),NaN,1,141M,2 SRR7988486,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),NaN,2,146M,2 SRR7988488,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),NaN,1,163M,2 SRR7988490,Takahashi2020role,H. sapiens,PRO-seq,HEK293T (cell line),NaN,2,123M,2 SRR8033049,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),NaN,1,38M,2 SRR8033050,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),NaN,2,45M,1 SRR8033051,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (30min),1,28M,1 SRR8033052,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1hr),1,30M,2 SRR8033053,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (2hr),1,33M,1 SRR8033054,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (4hr),1,25M,2 SRR8033055,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (8hr),1,44M,2 SRR8033056,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (12hr),1,29M,1 SRR8033057,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1day),1,28M,1 SRR8033058,Esousa2019kinetics,M. musculus,PRO-seq,ESC (cell line),doxycycline (1day),2,41M,1 SRR8111714,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),NaN,1,78M,3 SRR8111715,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),NaN,1,44M,2 SRR8111716,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),NaN,1,71M,2 SRR8111717,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),NaN,1,77M,3 SRR8111718,Leroy2019ledgf,H. sapiens,PRO-seq,myoblast (primary),NaN,1,108M,2 SRR8137173,Wang2019identification,H. sapiens,PRO-seq,K562 (cell line),NaN,1,84M,1 SRR816998,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,27M,1 SRR816999,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,25M,1 SRR817000,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,34M,1 SRR817001,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,23M,1 SRR817002,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,42M,3 SRR817003,Li2013functional,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,31M,2 SRR8206345,Herold2019recruitment,H. sapiens,GRO-seq,SHEP (cell line),various,1,152M,4 SRR8234171,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,1,31M,1 SRR8234172,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,2,25M,1 SRR8234173,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,3,25M,1 SRR8234174,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,1,33M,1 SRR8234175,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,2,26M,1 SRR8234176,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,3,36M,1 SRR8234177,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,1,28M,1 SRR8234178,Sendinc2019pcif1,H. sapiens,PRO-seq,MEL624 (cell line),NaN,2,27M,1 SRR8234179,Sendinc2019pcif1,H. sapiens,PRO-cap,MEL624 (cell line),NaN,3,26M,1 SRR8235064,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),1,16M,3 SRR8235065,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),2,20M,2 SRR8235066,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA beta-galactosidase (60hr),3,14M,3 SRR8235067,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),1,15M,3 SRR8235068,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),2,14M,3 SRR8235069,Elrod2019integrator,D. melanogaster,PRO-seq,DL1 (cell line),dsRNA IntS9 (60hr),3,17M,2 SRR826227,Lam2013rev,M. musculus,GRO-cap,RAW264.7 (cell line),NaN,1,9M,4 SRR828695,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),1,55M,4 SRR828696,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),2,199M,4 SRR828729,Galbraith2013hif1a,H. sapiens,GRO-seq,HCT116 (cell line),DMSO (1hr),3,137M,3 SRR836116,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,1,64M,2 SRR836117,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,63M,3 SRR836118,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,1,65M,1 SRR836119,Heinz2013effect,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,63M,2 SRR8364243,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,1,54M,1 SRR8364244,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,2,57M,3 SRR8364245,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),1,33M,1 SRR8364246,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (3day),2,48M,1 SRR8364247,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (7day),1,33M,3 SRR8364248,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),embryoid body differentiation protocol (7day),2,39M,1 SRR8384736,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,34M,1 SRR8384737,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,25M,1 SRR8384738,Korkmaz2019crispr,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,27M,1 SRR8419429,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"ICI 182,780 (3hr)",1,55M,1 SRR8419430,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (30min) , 2,5-hexanediol (5min)",1,56M,1 SRR8419431,Nair2019phase,H. sapiens,GRO-seq,MCF7 (cell line),"17-beta-estradiol (15hr) , 2,5-hexanediol (5min)",1,46M,1 SRR8429046,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (10min),1,83M,2 SRR8429047,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (10min),2,105M,4 SRR8429048,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (10min),1,82M,4 SRR8429049,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (10min),2,109M,3 SRR8429050,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (10min),1,100M,4 SRR8429051,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (10min),2,108M,4 SRR8429052,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (10min) , dexamethasone (10min)",1,117M,4 SRR8429053,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (10min) , dexamethasone (10min)",2,59M,4 SRR8429054,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (30min),1,56M,3 SRR8429055,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),ethanol (30min),2,80M,4 SRR8429056,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (30min),1,74M,3 SRR8429057,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),TNF-alpha (30min),2,109M,4 SRR8429058,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (30min),1,75M,3 SRR8429059,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),dexamethasone (30min),2,113M,4 SRR8429060,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (30min) , dexamethasone (30min)",1,79M,3 SRR8429061,Sasse2019nascent,H. sapiens,GRO-seq,BEAS-2B (cell line),"TNF-alpha (30min) , dexamethasone (30min)",2,80M,4 SRR8451931,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne BAC (90min)",1,28M,2 SRR8451932,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne BAC (90min)",1,27M,3 SRR8452660,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne varS (90min)",1,26M,4 SRR8452661,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne varS (90min)",1,24M,4 SRR8456237,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain Towne varS (90min)",1,53M,4 SRR8456238,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain Towne varS (90min)",1,46M,5 SRR8457216,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"flavopiridol (1hr) , HCMV strain TB40/E (4hr)",1,63M,2 SRR8457217,Parida2019nucleotide,H. sapiens,PRO-seq,foreskin fibroblast (primary),"DMSO (1hr) , HCMV strain TB40/E (4hr)",1,67M,1 SRR8463311,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"DMSO (1hr) , Mock infection (90min)",1,57M,4 SRR8463312,Parida2019nucleotide,H. sapiens,PRO-cap,foreskin fibroblast (primary),"flavopiridol (1hr) , Mock infection (90min)",1,49M,4 SRR8478992,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,1,104M,1 SRR8478993,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,2,77M,1 SRR8478994,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,118M,1 SRR8478995,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,86M,1 SRR8478996,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,1,136M,2 SRR8478997,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,2,65M,1 SRR8478998,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,133M,1 SRR8478999,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,66M,1 SRR8479000,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,1,83M,1 SRR8479001,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,2,128M,1 SRR8479002,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,161M,1 SRR8479003,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,141M,1 SRR8479004,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,1,123M,1 SRR8479005,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),NaN,2,94M,1 SRR8479006,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),1,163M,1 SRR8479007,Beckedorff2020human,H. sapiens,PRO-seq,HeLa (cell line),doxycycline (3day),2,165M,1 SRR8482945,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),NaN,1,17M,3 SRR8482946,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),NaN,2,21M,3 SRR8482947,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),NaN,1,25M,4 SRR8482948,Barucci2020small,C. elegans,PRO-seq,whole worm (organism),NaN,2,25M,3 SRR8483105,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,35M,1 SRR8483106,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,47M,2 SRR8483107,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,46M,2 SRR8483108,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,46M,2 SRR8483109,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,38M,1 SRR8483110,Zhu2019non,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,43M,1 SRR8544024,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,117M,2 SRR8544025,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,108M,1 SRR8544026,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,111M,1 SRR8544027,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,172M,2 SRR8544028,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),1,114M,3 SRR8544029,Thomas2019interaction,H. sapiens,PRO-seq,Ramos (cell line),hydroxytamoxifen (1day),2,200M,2 SRR8608051,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),DMSO (3hr),1,17M,3 SRR8608052,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),DMSO (3hr),2,20M,3 SRR8608053,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (3hr),1,17M,3 SRR8608054,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (3hr),2,17M,3 SRR8608055,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,1,21M,2 SRR8608056,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,2,26M,1 SRR8608057,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,3,13M,3 SRR8608058,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,4,12M,3 SRR8608059,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,1,15M,3 SRR8608060,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,2,17M,3 SRR8608061,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,3,20M,2 SRR8608062,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,4,11M,4 SRR8608063,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,1,17M,3 SRR8608064,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,2,23M,2 SRR8608065,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,3,16M,3 SRR8608066,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),NaN,4,14M,3 SRR8608067,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),1,22M,2 SRR8608068,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),2,24M,1 SRR8608069,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),3,13M,3 SRR8608070,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),4,14M,3 SRR8608071,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),1,22M,2 SRR8608072,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),2,24M,1 SRR8608073,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),3,3M,5 SRR8608074,Sathyan2019improved,H. sapiens,PRO-seq,HEK293T (cell line),auxin (90min),4,19M,2 SRR863647,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),NaN,1,9M,4 SRR863648,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),NaN,2,6M,4 SRR863649,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),NaN,1,7M,4 SRR863650,Cecere2013zfp1,C. elegans,GRO-seq,whole worm (organism),NaN,2,5M,4 SRR8669162,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),NaN,1,17M,2 SRR8669163,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),NaN,2,7M,4 SRR8669164,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (30hr),1,20M,2 SRR8669165,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (30hr),2,6M,4 SRR8669166,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),heat shock (1hr),1,35M,1 SRR8669167,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",1,15M,3 SRR8669168,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",2,8M,4 SRR8669169,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (30min) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr) , heat shock (1hr)",1,19M,2 SRR8669170,Vihervaara2021stress,H. sapiens,PRO-seq,K562 (cell line),"heat shock (30min) , heat shock (1hr) , heat shock (1hr) 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sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,20M,2 SRR892025,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),NaN,1,21M,1 SRR892026,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),NaN,1,26M,1 SRR892027,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),NaN,1,38M,1 SRR892028,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,11M,3 SRR892029,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,28M,1 SRR892030,Yang2013lncrna,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),1,30M,1 SRR8950256,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),NaN,1,25M,3 SRR8950257,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),NaN,2,36M,2 SRR8950259,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",1,52M,1 SRR8950260,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",2,85M,3 SRR8950261,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),"anti-CD40 (2day) , interleukin-4 (2day)",3,40M,1 SRR8950265,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,1,21M,1 SRR8950266,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,2,46M,1 SRR8950267,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,3,31M,1 SRR8950268,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,31M,1 SRR8950269,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,29M,1 SRR8950270,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,79M,2 SRR8950272,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,38M,1 SRR8950273,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,48M,1 SRR8950277,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",1,39M,1 SRR8950278,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",2,39M,1 SRR8950279,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,38M,3 SRR8957130,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),1,44M,1 SRR8957131,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),2,51M,1 SRR8957132,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),3,58M,1 SRR8957133,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),4,42M,1 SRR8957134,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),5,27M,2 SRR8957135,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),6,42M,1 SRR8957136,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),1,83M,3 SRR8957137,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),2,49M,1 SRR8957138,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),HSV-1 (1hr),3,44M,1 SRR8957139,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , cycloheximide (4hr)",1,36M,1 SRR8957140,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , cycloheximide (4hr)",2,42M,1 SRR8957141,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , cycloheximide (4hr)",3,40M,1 SRR8957142,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , phosphonoacetic acid (6hr)",1,84M,2 SRR8957143,Birkenheuer2020rna,H. sapiens,PRO-seq,HEp2 (cell line),"HSV-1 (1hr) , phosphonoacetic acid (6hr)",2,52M,2 SRR8992356,Stengel2019histone,H. sapiens,PRO-seq,SUDHL4 (cell line),DMSO (3hr),2,92M,3 SRR8992357,Stengel2019histone,H. sapiens,PRO-seq,SUDHL4 (cell line),RGFP966 (3hr),1,89M,2 SRR8992358,Stengel2019histone,H. sapiens,PRO-seq,NUDUL1 (cell line),DMSO (3hr),1,88M,3 SRR8992359,Stengel2019histone,H. sapiens,PRO-seq,NUDUL1 (cell line),RGFP966 (3hr),1,74M,2 SRR8992360,Stengel2019histone,H. sapiens,PRO-seq,SUDHL4 (cell line),DMSO (3hr),1,74M,2 SRR8992361,Stengel2019histone,H. sapiens,PRO-seq,SUDHL4 (cell line),RGFP966 (3hr),2,67M,3 SRR8992362,Stengel2019histone,H. sapiens,PRO-seq,NUDUL1 (cell line),DMSO (3hr),2,84M,3 SRR8992363,Stengel2019histone,H. sapiens,PRO-seq,NUDUL1 (cell line),RGFP966 (3hr),2,79M,3 SRR8992364,Stengel2019histone,H. sapiens,PRO-seq,OCILY1 (cell line),DMSO (3hr),1,42M,2 SRR8992365,Stengel2019histone,H. sapiens,PRO-seq,OCILY1 (cell line),DMSO (3hr),2,45M,2 SRR8992366,Stengel2019histone,H. sapiens,PRO-seq,OCILY1 (cell line),RGFP966 (3hr),1,51M,2 SRR8992367,Stengel2019histone,H. sapiens,PRO-seq,OCILY1 (cell line),RGFP966 (3hr),2,45M,2 SRR9007616,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,1,63M,1 SRR9007621,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),glucose-free media (2day),1,73M,1 SRR9007624,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,1,64M,1 SRR9032553,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),"IFN-gamma (30min) , cortistatin A (1hr)",2,85M,3 SRR9032554,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),"IFN-gamma (30min) , cortistatin A (1hr)",1,84M,3 SRR9032555,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),cortistatin A (1hr),2,100M,3 SRR9032556,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),cortistatin A (1hr),1,90M,3 SRR9032557,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),"IFN-gamma (30min) , DMSO (1hr)",2,109M,3 SRR9032558,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),"IFN-gamma (30min) , DMSO (1hr)",1,84M,2 SRR9032561,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),NaN,2,165M,3 SRR9032562,Steinparzer2019transcriptional,M. musculus,GRO-seq,MEF (cell line),NaN,1,78M,3 SRR9051602,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,1,3M,5 SRR9051603,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,2,42M,3 SRR9051604,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,1,1M,5 SRR9051605,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,2,30M,3 SRR9051606,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,1,1M,5 SRR9051607,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,2,45M,3 SRR9051608,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,1,2M,5 SRR9051609,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,2,40M,3 SRR9051610,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,1,5M,5 SRR9051611,Ueberschar2019ben,D. melanogaster,PRO-seq,embryo (tissue),NaN,2,74M,3 SRR915731,Le2013mapping,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),1,23M,2 SRR915732,Le2013mapping,H. sapiens,GRO-seq,MCF7 (cell line),ethanol (1hr),2,101M,4 SRR915733,Le2013mapping,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),1,24M,3 SRR915734,Le2013mapping,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (1hr),2,52M,3 SRR929978,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),"bromouridine (15min) , camptothecin (1hr)",1,84M,4 SRR929979,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),"bromouridine (15min) , camptothecin (1hr)",1,76M,4 SRR929980,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),"bromouridine (15min) , camptothecin (1hr)",1,59M,3 SRR929983,Veloso2013genome-wide,H. sapiens,other,skin fibroblast (primary),"bromouridine (15min) , camptothecin (1hr)",1,75M,4 SRR929984,Veloso2013genome-wide,H. sapiens,other,skin fibroblast (primary),"bromouridine (15min) , camptothecin (1hr)",1,54M,4 SRR929985,Veloso2013genome-wide,H. sapiens,other,skin fibroblast (primary),"bromouridine (15min) , camptothecin (1hr)",1,58M,4 SRR9304728,Fant2020tfiid,H. sapiens,PRO-seq,HCT116 (cell line),anti-TAF1 C413 antibody (1hr),1,115M,2 SRR9304729,Fant2020tfiid,H. sapiens,PRO-seq,HCT116 (cell line),anti-TAF1 C413 antibody (1hr),2,105M,2 SRR9304730,Fant2020tfiid,H. sapiens,PRO-seq,HCT116 (cell line),mock treatment (1hr),1,107M,2 SRR9304731,Fant2020tfiid,H. sapiens,PRO-seq,HCT116 (cell line),mock treatment (1hr),2,132M,2 SRR9304732,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacI (60hr),1,41M,4 SRR9304733,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacI (60hr),2,44M,4 SRR9304734,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacI (60hr),3,38M,4 SRR9304735,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Taf1 (60hr),1,42M,3 SRR9304736,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Taf1 (60hr),2,51M,4 SRR9304737,Fant2020tfiid,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Taf1 (60hr),3,50M,4 SRR930669,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,15M,3 SRR930670,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (10min) , serum starvation (850min)",1,15M,3 SRR930671,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",2,12M,3 SRR930672,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (6hr) , serum starvation (20hr)",2,17M,2 SRR930673,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (12hr) , serum starvation (26hr)",2,15M,3 SRR930674,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1day) , serum starvation (38hr)",2,14M,3 SRR930675,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,8M,4 SRR930676,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),2,27M,1 SRR930679,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",3,8M,4 SRR930680,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",4,25M,2 SRR930681,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (6hr) , serum starvation (20hr)",3,23M,2 SRR930684,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"DMSO (2hr) , serum starvation (15hr)",1,29M,1 SRR930685,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"flavopiridol (2hr) , serum starvation (15hr)",1,23M,3 SRR930686,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"IBET151 (2hr) , serum starvation (15hr)",1,28M,1 SRR930687,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , DMSO (2hr) , serum starvation (15hr)",1,19M,2 SRR930688,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , flavopiridol (2hr) , serum starvation (15hr)",1,16M,2 SRR930689,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , IBET151 (2hr) , serum starvation (15hr)",1,22M,1 SRR930690,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , flavopiridol (2hr) , serum starvation (15hr)",2,17M,4 SRR930717,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),NaN,1,22M,1 SRR930718,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),Kdo2-Lipid A (1hr),1,19M,2 SRR930719,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),hydroxytamoxifen (1day),1,23M,1 SRR930720,Kaikkonen2013remodeling,M. musculus,GRO-seq,hematopoietic progenitor cell (cell line),"Kdo2-Lipid A (1hr) , hydroxytamoxifen (1day)",1,22M,1 SRR9336633,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),NaN,1,19M,4 SRR9336634,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),NaN,2,26M,3 SRR9336635,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),NaN,3,54M,1 SRR9336636,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (20min),1,24M,3 SRR9336637,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (20min),2,23M,3 SRR9336638,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (20min),3,50M,1 SRR9336639,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (2hr),1,25M,3 SRR9336640,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (2hr),2,28M,3 SRR9336641,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (2hr),3,43M,2 SRR9336642,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (3hr),1,18M,4 SRR9336643,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (3hr),2,79M,1 SRR9336644,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (3hr),3,33M,3 SRR9336645,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (40min),1,25M,3 SRR9336646,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (40min),2,24M,4 SRR9336647,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (40min),3,32M,3 SRR9336648,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (4hr),1,22M,3 SRR9336649,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (4hr),2,118M,2 SRR9336650,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (4hr),3,30M,3 SRR9336651,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (1hr),1,21M,3 SRR9336652,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (1hr),2,26M,3 SRR9336653,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (1hr),3,26M,3 SRR9336654,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),1,47M,1 SRR9336655,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),2,51M,1 SRR9336656,Anderson2020defining,M. musculus,PRO-seq,3T3-L1 (cell line),adipocyte differentiation protocol (6day),3,34M,2 SRR935117,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),DMSO (50min),1,23M,3 SRR935118,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),DMSO (50min),2,49M,2 SRR935119,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (750s),1,20M,3 SRR935120,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (750s),2,29M,2 SRR935123,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (50min),1,23M,4 SRR935124,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (50min),2,25M,4 SRR953377,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,1,22M,3 SRR953378,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,2,44M,4 SRR953379,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,1,41M,3 SRR953380,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,2,33M,4 SRR953381,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,1,29M,3 SRR953382,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,2,63M,4 SRR953383,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,1,21M,4 SRR953384,Cecere2014global,C. elegans,GRO-seq,whole worm (organism),NaN,2,27M,4 SRR9602768,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 intronic antisense oligonucleotide 2 (1day),1,151M,1 SRR9602769,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 exonic antisense oligonucleotide 2 (1day),1,189M,1 SRR9602770,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,162M,1 SRR9602771,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 intronic antisense oligonucleotide 1 (1day),1,114M,1 SRR9602772,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,80M,2 SRR9602773,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Nedd4 exonic antisense oligonucleotide 3 (1day),1,86M,2 SRR9602774,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 intronic antisense oligonucleotide 1 (1day),1,71M,2 SRR9602775,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),Atxn10 exonic antisense oligonucleotide 1 (1day),1,75M,1 SRR9602776,Lai2020directed,M. musculus,PRO-seq,MHT (cell line),control antisense oligonucleotide (1day),1,80M,2 SRR9825093,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,53M,4 SRR9825094,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,53M,4 SRR9825095,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),NaN,1,92M,4 SRR9825096,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),NaN,2,45M,4 SRR9825097,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,73M,4 SRR9825098,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,44M,4 SRR9825099,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),1,53M,4 SRR9825100,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),phenylephrine (1hr),2,57M,4 SRR9825101,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),NaN,1,52M,4 SRR9825102,Li2020signalosome,R. norvegicus,PRO-seq,cardiomyocyte (primary),NaN,2,46M,4 SRR9833430,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),NaN,1,29M,1 SRR9833433,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),NaN,2,30M,2 SRR988329,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,1,8M,4 SRR988330,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,2,5M,5 SRR988331,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,3,8M,4 SRR988332,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,4,7M,4 SRR988333,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,5,5M,5 SRR988334,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,1,4M,5 SRR988335,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,2,6M,5 SRR988336,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,3,5M,5 SRR988337,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),NaN,4,4M,5 SRR988338,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,8M,4 SRR988339,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),2,8M,4 SRR988340,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),3,6M,5 SRR988341,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),1,10M,4 SRR988342,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (1hr),2,3M,5 SRR988343,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),1,8M,4 SRR988344,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),2,5M,5 SRR988345,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),1,10M,4 SRR988346,Li2013ncor,M. musculus,GRO-seq,peritoneal macrophage (primary),Kdo2-Lipid A (12hr),2,3M,5 SRR9961457,Zhang2019fundamental,M. musculus,GRO-seq,splenic B cell (primary),NaN,3,20M,4 SRR9961458,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,1,32M,1 SRR9961459,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,2,30M,2 SRR9961460,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),NaN,3,28M,2 SRR9961461,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",3,18M,2 SRR9961462,Zhang2019fundamental,M. musculus,GRO-seq,CH12F3 (cell line),"TGF-beta (1day) , anti-CD40 (1day) , interleukin-4 (1day)",4,15M,3 SRZ014283,Core2008nascent,H. sapiens,GRO-seq,IMR90 (cell line),NaN,1,11M,4 SRZ014286,Core2008nascent,H. sapiens,GRO-seq,IMR90 (cell line),NaN,2,9M,4 SRZ064988,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,18M,3 SRZ064990,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,17M,3 SRZ064992,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,17M,3 SRZ064995,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,5M,5 SRZ073008,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,20M,3 SRZ073011,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA EGFP (6day),1,81M,3 SRZ073015,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA EGFP (6day),2,33M,3 SRZ073017,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Msl2 (6day),1,79M,3 SRZ073021,Larschan2011x,D. melanogaster,GRO-seq,S2 (cell line),dsRNA Msl2 (6day),2,34M,3 SRZ097854,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),NaN,1,4M,5 SRZ097858,Min2011regulating,M. musculus,GRO-seq,ESC (cell line),NaN,2,4M,5 SRZ10004434,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),DMSO (90min),1,141M,2 SRZ10004438,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),DMSO (90min),2,124M,2 SRZ10004442,Bahat2019targeting,H. sapiens,GRO-seq,HeLa (cell line),Spt5-Pol II small-molecule inhibitor 21 (90min),1,138M,2 SRZ10354600,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (1hr),1,108M,2 SRZ10354602,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (1hr),2,109M,2 SRZ10354604,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (1hr),1,104M,3 SRZ10354606,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (1hr),2,117M,2 SRZ10354608,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),1,77M,1 SRZ10354610,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),DMSO (2hr),2,80M,1 SRZ10354612,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),1,75M,2 SRZ10354614,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),dTAG7 (2hr),2,82M,2 SRZ10354616,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),NVP2 (30min),1,92M,3 SRZ10354618,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),NVP2 (30min),2,97M,3 SRZ10354620,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),"NVP2 (30min) , dTAG7 (2hr)",1,85M,3 SRZ10354622,Jaeger2020selective,H. sapiens,PRO-seq,KBM7 (cell line),"NVP2 (30min) , dTAG7 (2hr)",2,74M,3 SRZ10354637,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",1,99M,1 SRZ10354639,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"DMSO (1hr) , 4-thiouridine (5min)",2,110M,1 SRZ10354641,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (1hr)",1,102M,1 SRZ10354643,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (1hr)",2,117M,1 SRZ10354645,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",1,107M,1 SRZ10354647,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , DMSO (2hr)",2,113M,1 SRZ10354649,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",1,106M,1 SRZ10354651,Jaeger2020selective,H. sapiens,other,KBM7 (cell line),"4-thiouridine (5min) , dTAG7 (2hr)",2,111M,1 SRZ10466082,Wang2020increased,H. sapiens,GRO-seq,NSPC (primary),NaN,1,55M,1 SRZ10466084,Wang2020increased,H. sapiens,GRO-seq,NSPC (primary),NaN,2,53M,1 SRZ11607565,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Nurf301 (5day),1,56M,3 SRZ11607568,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),"dsRNA Bap170 (5day) , dsRNA Nurf301 (5day)",1,42M,3 SRZ11607571,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA LacZ (5day),1,38M,3 SRZ11607574,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Gaf (5day),1,46M,3 SRZ11607577,Judd2021pioneer,D. melanogaster,PRO-seq,S2 (cell line),dsRNA Bap170 (5day),1,37M,3 SRZ12179472,Zhu2021calcium,M. musculus,GRO-seq,ECOMG (cell line),neutrophil differentiation protocol,1,38M,3 SRZ12179474,Zhu2021calcium,M. musculus,GRO-seq,ECOMG (cell line),"A23187 (4hr) , neutrophil differentiation protocol",1,32M,4 SRZ1482436,Williams2015pausing,M. musculus,GRO-seq,ESC (cell line),NaN,1,87M,2 SRZ1482441,Williams2015pausing,M. musculus,GRO-seq,ESC (cell line),NaN,2,68M,2 SRZ1554311,Core2014analysis,H. sapiens,PRO-seq,K562 (cell line),NaN,1,447M,3 SRZ1575914,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),NaN,2,399M,4 SRZ1575919,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),NaN,1,131M,4 SRZ1575923,Mayer2015native,H. sapiens,NET-seq,HEK293T (cell line),NaN,2,691M,4 SRZ1575929,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),DMSO (1hr),1,261M,4 SRZ1575932,Mayer2015native,H. sapiens,NET-seq,HeLa S3 (cell line),flavopiridol (1hr),1,291M,4 SRZ1648896,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),ethanol (1hr),3,44M,2 SRZ1648898,Puc2015ligand,H. sapiens,GRO-seq,LNCaP (cell line),dihydrotestosterone (1hr),3,63M,3 SRZ1693609,Duttke2015human,H. sapiens,GRO-cap,HeLa (cell line),NaN,1,66M,4 SRZ1693611,Duttke2015human,H. sapiens,GRO-seq,HeLa (cell line),NaN,1,68M,4 SRZ1744498,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),NaN,1,42M,3 SRZ1744500,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,28M,4 SRZ1744502,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,46M,4 SRZ1744504,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,42M,3 SRZ1744506,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,69M,3 SRZ1744508,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),NaN,1,43M,3 SRZ1744510,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,21M,4 SRZ1744512,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,38M,3 SRZ1744514,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,45M,3 SRZ1744516,Wang2015molecular,M. musculus,GRO-seq,ESC (cell line),DRB (3hr),1,35M,3 SRZ1745515,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),NaN,1,36M,2 SRZ1745517,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),Wnt3a (6hr),1,45M,2 SRZ1745519,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,31M,2 SRZ1745521,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),activin A (6hr),1,42M,2 SRZ1745523,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),NaN,1,51M,2 SRZ1745525,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,44M,2 SRZ1745527,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),NaN,1,46M,2 SRZ1745529,Estaras2015smad,H. sapiens,GRO-seq,ESC (cell line),"Wnt3a (6hr) , activin A (6hr)",1,43M,2 SRZ1810067,Danko2015identification,H. sapiens,PRO-seq,CD4+ T cell (primary),DMSO/ethanol (30min),1,86M,3 SRZ1810071,Danko2015identification,H. sapiens,PRO-seq,Jurkat T cell (cell line),DMSO/ethanol (30min),1,58M,2 SRZ1928221,Mayer2015native,H. sapiens,NET-seq,HEK293T (cell line),NaN,1,8M,5 SRZ1950491,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,37M,2 SRZ1950493,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,35M,2 SRZ1950495,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),NaN,1,26M,2 SRZ1950497,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),NaN,2,34M,3 SRZ1950499,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (4hr),1,37M,2 SRZ1950501,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (4hr),2,33M,2 SRZ1950503,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (12hr),1,36M,2 SRZ1950505,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (12hr),2,39M,2 SRZ1950507,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,37M,2 SRZ1950509,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,35M,2 SRZ1950511,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),1,32M,2 SRZ1950513,Teppo2016genome,H. sapiens,GRO-seq,Nalm6 (cell line),doxycycline (1day),2,26M,2 SRZ1951428,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),NaN,1,40M,1 SRZ1951430,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),NaN,2,36M,2 SRZ1951433,Heinaniemi2016transcription,H. sapiens,GRO-seq,REH (cell line),stromal cell co-culture (1day),1,20M,1 SRZ2084576,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),NaN,1,49M,2 SRZ2084580,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),NaN,2,81M,1 SRZ2084584,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),NaN,1,63M,3 SRZ2084588,Chen2015paf1,H. sapiens,GRO-seq,HCT116 (cell line),NaN,2,107M,2 SRZ2820481,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,1,62M,1 SRZ2820483,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,2,71M,1 SRZ2820485,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,3,91M,3 SRZ2820487,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,1,49M,2 SRZ2820489,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,2,114M,2 SRZ2820491,Wei2016long,M. musculus,GRO-seq,NSPC (primary),NaN,3,63M,2 SRZ2960994,Magnuson2015identifying,H. sapiens,other,K562 (cell line),bromouridine (30min),1,89M,3 SRZ2960996,Magnuson2015identifying,H. sapiens,other,K562 (cell line),bromouridine (30min),1,92M,4 SRZ2960998,Magnuson2015identifying,H. sapiens,other,K562 (cell line),"bromouridine (30min) , ultraviolet C (25s)",1,86M,4 SRZ2961000,Magnuson2015identifying,H. sapiens,other,K562 (cell line),"bromouridine (30min) , ultraviolet C (100s)",1,85M,4 SRZ2961002,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,61M,2 SRZ2961004,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",1,58M,4 SRZ2961006,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s) , TNF-alpha (1hr)",1,53M,4 SRZ2961008,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",2,49M,3 SRZ2961012,Magnuson2015identifying,H. sapiens,other,HF1 (cell line),"bromouridine (30min) , ultraviolet C (20s)",3,57M,3 SRZ3031836,Booth2016divergence,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,1,20M,4 SRZ3031838,Booth2016divergence,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,1,23M,4 SRZ3031840,Booth2016divergence,S. pombe,PRO-seq,whole yeast (organism),NaN,1,25M,3 SRZ3031842,Booth2016divergence,S. pombe,PRO-seq,whole yeast (organism),NaN,1,33M,4 SRZ3031844,Booth2016divergence,S. cerevisiae,PRO-cap,whole yeast (organism),NaN,1,23M,5 SRZ3031846,Booth2016divergence,S. pombe,PRO-cap,whole yeast (organism),NaN,1,50M,4 SRZ3223688,Jager2016nuclear,M. musculus,GRO-seq,brown adipose tissue (tissue),NaN,1,148M,2 SRZ3223690,Jager2016nuclear,M. musculus,GRO-seq,brown adipose tissue (tissue),NaN,1,334M,3 SRZ3223692,Jager2016nuclear,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),NaN,1,141M,2 SRZ3223694,Jager2016nuclear,M. musculus,GRO-seq,epididymal white adipose tissue (tissue),NaN,1,183M,2 SRZ3223696,Jager2016nuclear,M. musculus,GRO-seq,inguinal white adipose tissue (tissue),NaN,1,118M,2 SRZ3223698,Jager2016nuclear,M. musculus,GRO-seq,inguinal white adipose tissue (tissue),NaN,1,211M,2 SRZ3477284,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),NaN,1,22M,4 SRZ3477286,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),NaN,2,13M,4 SRZ3477288,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (healthy) (tissue),NaN,3,21M,4 SRZ3477290,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),NaN,1,16M,4 SRZ3477292,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),NaN,2,27M,4 SRZ3477294,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (borderline ischemic) (tissue),NaN,3,10M,4 SRZ3477296,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),NaN,1,23M,4 SRZ3477298,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),NaN,2,15M,5 SRZ3477300,Kaikkonen2017genome,S. scrofa,GRO-seq,myocardium (ischemic) (tissue),NaN,3,11M,5 SRZ354085,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,1,20M,5 SRZ354088,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,2,18M,5 SRZ354090,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),NaN,3,24M,5 SRZ354095,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),1,6M,5 SRZ354098,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),2,7M,5 SRZ354100,Mckinlay2011genome,S. cerevisiae,PRO-seq,whole yeast (organism),heat shock (20min),3,5M,5 SRZ3734610,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),thermoneutrality (14day),1,242M,3 SRZ3734612,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),thermoneutrality (14day),1,232M,4 SRZ3734614,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),NaN,1,276M,2 SRZ3734617,Emmett2017histone,M. musculus,GRO-seq,brown adipose tissue (tissue),NaN,1,243M,3 SRZ4012390,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,39M,2 SRZ4012394,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,78M,3 SRZ4012396,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,39M,3 SRZ4012400,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",3,16M,3 SRZ4012402,Danko2018dynamic,H. sapiens,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",3,4M,5 SRZ4012404,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,49M,3 SRZ4012406,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,54M,3 SRZ4012408,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,47M,1 SRZ4012410,Danko2018dynamic,P. troglodytes,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,38M,2 SRZ4012415,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",4,10M,4 SRZ4012417,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",1,68M,3 SRZ4012420,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",1,58M,4 SRZ4012423,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ethanol (30min) , DMSO (30min)",2,63M,2 SRZ4012426,Danko2018dynamic,M. mulatta,PRO-seq,CD4+ T cell (primary),"ionomycin (30min) , phorbol 12-myristate 13-acetate (30min)",2,55M,3 SRZ497904,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),DMSO,1,10M,4 SRZ497907,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),DMSO,2,17M,3 SRZ497912,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,21M,2 SRZ497914,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,13M,3 SRZ497917,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,14M,3 SRZ497922,Hah2011rapid,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (160min),2,20M,2 SRZ5109941,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,ESC (cell line),NaN,1,27M,1 SRZ5195540,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,1,77M,2 SRZ5195542,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,2,85M,2 SRZ5195544,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,1,110M,2 SRZ5195546,Agarwal2021kdm1a,M. musculus,GRO-seq,ESC (cell line),NaN,2,106M,1 SRZ5251072,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HUVEC (primary),NaN,1,21M,3 SRZ5251074,Bouvyliivrand2017analysis,H. sapiens,GRO-seq,HUVEC (primary),VEGF-A (2hr),1,29M,3 SRZ5298779,Incarnato2017vivo,E. coli,other,whole bacteria (organism),NaN,1,114M,4 SRZ5298783,Incarnato2017vivo,E. coli,other,whole bacteria (organism),NaN,1,210M,4 SRZ5298787,Incarnato2017vivo,E. coli,other,whole bacteria (organism),NaN,2,233M,4 SRZ5364052,Franco2018enhancer,H. sapiens,GRO-seq,76NF2V (cell line),NaN,1,55M,3 SRZ5364053,Franco2018enhancer,H. sapiens,GRO-seq,76NF2V (cell line),NaN,2,53M,3 SRZ5364056,Franco2018enhancer,H. sapiens,GRO-seq,MCF10A (cell line),NaN,1,49M,4 SRZ5364057,Franco2018enhancer,H. sapiens,GRO-seq,MCF10A (cell line),NaN,2,51M,4 SRZ5364060,Franco2018enhancer,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,79M,2 SRZ5364063,Franco2018enhancer,H. sapiens,GRO-seq,ZR751 (cell line),NaN,1,57M,1 SRZ5364064,Franco2018enhancer,H. sapiens,GRO-seq,ZR751 (cell line),NaN,2,50M,1 SRZ5364067,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-361 (cell line),NaN,1,64M,1 SRZ5364068,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-361 (cell line),NaN,2,56M,1 SRZ5364071,Franco2018enhancer,H. sapiens,GRO-seq,UACC812 (cell line),NaN,1,50M,3 SRZ5364074,Franco2018enhancer,H. sapiens,GRO-seq,SKBR3 (cell line),NaN,1,63M,3 SRZ5364075,Franco2018enhancer,H. sapiens,GRO-seq,SKBR3 (cell line),NaN,2,62M,2 SRZ5364078,Franco2018enhancer,H. sapiens,GRO-seq,AU565 (cell line),NaN,1,65M,3 SRZ5364079,Franco2018enhancer,H. sapiens,GRO-seq,AU565 (cell line),NaN,2,61M,3 SRZ5364082,Franco2018enhancer,H. sapiens,GRO-seq,HCC1954 (cell line),NaN,1,62M,3 SRZ5364083,Franco2018enhancer,H. sapiens,GRO-seq,HCC1954 (cell line),NaN,2,59M,3 SRZ5364086,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-468 (cell line),NaN,1,50M,2 SRZ5364087,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-468 (cell line),NaN,2,56M,2 SRZ5364090,Franco2018enhancer,H. sapiens,GRO-seq,HCC1937 (cell line),NaN,1,62M,2 SRZ5364091,Franco2018enhancer,H. sapiens,GRO-seq,HCC1937 (cell line),NaN,2,57M,2 SRZ5364094,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-231 (cell line),NaN,1,72M,2 SRZ5364095,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-231 (cell line),NaN,2,80M,2 SRZ5364098,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-436 (cell line),NaN,1,54M,1 SRZ5364099,Franco2018enhancer,H. sapiens,GRO-seq,MDA-MB-436 (cell line),NaN,2,68M,2 SRZ543417,Lin2012global,M. musculus,GRO-seq,pre pro B cell (primary),NaN,1,65M,2 SRZ543419,Lin2012global,M. musculus,GRO-seq,pro B cell (primary),NaN,1,88M,3 SRZ544876,Core2012defining,D. melanogaster,GRO-seq,S2 (cell line),NaN,1,24M,2 SRZ579299,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),NaN,1,41M,1 SRZ579310,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),NaN,2,27M,3 SRZ579319,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),NaN,3,13M,4 SRZ579324,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),1,46M,1 SRZ579335,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),2,24M,2 SRZ579342,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (10min),3,10M,3 SRZ579347,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (25min),1,19M,2 SRZ579353,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (25min),2,23M,1 SRZ579360,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),1,15M,3 SRZ579364,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),2,21M,1 SRZ579370,Danko2013signaling,H. sapiens,GRO-seq,MCF7 (cell line),17-beta-estradiol (40min),3,32M,3 SRZ5861742,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,1,10M,4 SRZ5861744,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,2,9M,4 SRZ5861746,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO,3,8M,4 SRZ5861748,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,8M,4 SRZ5861750,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,8M,4 SRZ5861752,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 SRZ5861754,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,10M,4 SRZ5861756,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 SRZ5861758,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 SRZ5861760,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,9M,4 SRZ5861762,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,3 SRZ5861764,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 SRZ5861766,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 SRZ5861768,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 SRZ5861770,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,9M,4 SRZ5861772,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 SRZ5861774,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,9M,4 SRZ5861776,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,10M,3 SRZ5861778,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,9M,4 SRZ5861780,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,11M,3 SRZ5861782,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,12M,3 SRZ5861784,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,11M,3 SRZ5861786,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 SRZ5861788,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,12M,3 SRZ5861790,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,12M,3 SRZ5861792,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,10M,4 SRZ5861794,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,10M,3 SRZ5861796,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,10M,3 SRZ5861798,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,12M,3 SRZ5861800,Kourtis2018oncogenic,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),3,11M,3 SRZ5944049,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),TNF-alpha (16hr),1,26M,1 SRZ5944050,Rahnamoun2017mutant,H. sapiens,GRO-seq,SW480 (cell line),TNF-alpha (16hr),2,30M,1 SRZ5944950,Gao2017thyroid,H. sapiens,GRO-seq,CD34+ erythroblast (primary),DMSO (6hr),1,73M,4 SRZ5944951,Gao2017thyroid,H. sapiens,GRO-seq,CD34+ erythroblast (primary),GC-1 (6hr),2,51M,4 SRZ611824,Kwak2013precise,D. melanogaster,PRO-seq,S2 (cell line),NaN,1,48M,3 SRZ611829,Kwak2013precise,D. melanogaster,PRO-cap,S2 (cell line),NaN,1,44M,4 SRZ6290499,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),1,50M,1 SRZ6290503,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),1,37M,1 SRZ6290507,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),2,35M,1 SRZ6290511,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),2,35M,1 SRZ6290515,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),3,30M,1 SRZ6290519,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),3,44M,1 SRZ6290523,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),4,40M,1 SRZ6290527,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),4,36M,1 SRZ6290531,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),1,36M,1 SRZ6290535,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),1,28M,1 SRZ6290539,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),2,38M,1 SRZ6290543,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),2,40M,1 SRZ6290547,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),3,37M,1 SRZ6290551,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),3,39M,1 SRZ6290555,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),growth media (6hr),4,35M,1 SRZ6290559,Rao2017cohesin,H. sapiens,PRO-seq,HCT116 (cell line),indoleacetic acid (6hr),4,34M,1 SRZ6376816,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,6,80M,0 SRZ6376818,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,71M,0 SRZ6376821,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,55M,0 SRZ6376823,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,67M,0 SRZ6376824,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,2,55M,0 SRZ6376829,Liu2018rna-directed,A. thaliana,GRO-seq,inflorescence and meristem (tissue),NaN,1,63M,0 SRZ6427123,Chen2018rna,M. musculus,GRO-seq,splenic B cell (primary),lipopolysaccharide (3day),1,55M,4 SRZ6427125,Chen2018rna,M. musculus,GRO-seq,splenic B cell (primary),lipopolysaccharide (3day),2,72M,4 SRZ6427127,Chen2018rna,M. musculus,GRO-seq,splenic B cell (primary),lipopolysaccharide (3day),1,74M,5 SRZ6427129,Chen2018rna,M. musculus,GRO-seq,splenic B cell (primary),lipopolysaccharide (3day),2,73M,5 SRZ6497147,Li2018lncrna,H. sapiens,GRO-seq,BJ (cell line),NaN,1,54M,3 SRZ6497149,Li2018lncrna,H. sapiens,GRO-seq,BJ (cell line),NaN,2,77M,3 SRZ6497151,Li2018lncrna,H. sapiens,GRO-seq,BJ (cell line),hydroxytamoxifen (14day),1,44M,2 SRZ6497153,Li2018lncrna,H. sapiens,GRO-seq,BJ (cell line),hydroxytamoxifen (14day),2,62M,2 SRZ6497155,Li2018lncrna,H. sapiens,GRO-seq,TIG-3 (cell line),NaN,1,60M,3 SRZ6497157,Li2018lncrna,H. sapiens,GRO-seq,TIG-3 (cell line),hydroxytamoxifen (14day),1,73M,3 SRZ6661079,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,1,186M,5 SRZ6661080,Zhu2018rna,A. thaliana,GRO-seq,seedling (tissue),NaN,2,295M,5 SRZ6661085,Zhu2018rna,A. thaliana,NET-seq,seedling (tissue),NaN,1,None,0 SRZ7184276,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),NaN,1,42M,2 SRZ7184278,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),myotube differentiation protocol (2day),1,52M,3 SRZ7184280,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),NaN,1,43M,3 SRZ7184282,Zhao2019myod,M. musculus,PRO-seq,C2C12 (cell line),myotube differentiation protocol (2day),1,53M,2 SRZ7349475,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO (3day),1,23M,2 SRZ7349477,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),DMSO (3day),2,24M,3 SRZ7349479,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,17M,2 SRZ7349481,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,24M,3 SRZ7349483,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,19M,2 SRZ7349485,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,21M,2 SRZ7349487,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,18M,2 SRZ7349489,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,17M,2 SRZ7349491,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,16M,2 SRZ7349493,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,18M,2 SRZ7349495,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,18M,2 SRZ7349497,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,20M,2 SRZ7349499,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,16M,2 SRZ7349501,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,20M,3 SRZ7349503,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,17M,2 SRZ7349505,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,17M,3 SRZ7349507,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,19M,3 SRZ7349509,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,16M,4 SRZ7349511,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),1,18M,2 SRZ7349513,Kloetgen2020three,H. sapiens,GRO-seq,CUTLL1 (cell line),gamma-secretase inhibitor (3day),2,17M,2 SRZ7458410,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,2M,5 SRZ7458412,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,11M,3 SRZ7458414,Tome2018single,H. sapiens,other,K562 (cell line),NaN,1,3M,5 SRZ7458419,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,17M,3 SRZ7458421,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,29M,1 SRZ7458423,Tome2018single,H. sapiens,other,K562 (cell line),NaN,2,17M,3 SRZ7741169,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,1,32M,1 SRZ7741171,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,2,28M,1 SRZ7741173,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,1,25M,1 SRZ7741175,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,2,27M,1 SRZ7741177,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,1,28M,1 SRZ7741179,Aeby2020decapping,M. musculus,PRO-seq,ESC (cell line),NaN,2,27M,1 SRZ7746868,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,1,63M,2 SRZ7746871,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,2,55M,2 SRZ7746874,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,1,78M,2 SRZ7746877,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,2,52M,4 SRZ7746880,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,1,58M,4 SRZ7746883,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,2,63M,1 SRZ7746886,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,1,55M,1 SRZ7746889,Zhang2018timing,H. sapiens,other,HEK293 (cell line),NaN,2,127M,3 SRZ7746900,Zhang2018timing,H. sapiens,other,KBM7 (cell line),triptolide (10min),1,28M,1 SRZ7746902,Zhang2018timing,H. sapiens,other,KBM7 (cell line),triptolide (10min),1,25M,1 SRZ7746904,Zhang2018timing,H. sapiens,other,KBM7 (cell line),DMSO (10min),1,20M,2 SRZ7746906,Zhang2018timing,H. sapiens,other,KBM7 (cell line),DMSO (10min),1,27M,1 SRZ7879154,Sheridan2019widespread,H. sapiens,GRO-seq,HEK293T Flp-In (cell line),doxycycline (1day),1,22M,4 SRZ7879156,Sheridan2019widespread,H. sapiens,GRO-seq,HEK293T Flp-In (cell line),doxycycline (1day),2,34M,4 SRZ7879158,Sheridan2019widespread,H. sapiens,GRO-seq,HEK293T Flp-In (cell line),NaN,1,23M,4 SRZ7879160,Sheridan2019widespread,H. sapiens,GRO-seq,HEK293T Flp-In (cell line),NaN,2,30M,4 SRZ7879168,Sheridan2019widespread,H. sapiens,NET-seq,HEK293T Flp-In (cell line),doxycycline (1day),1,43M,3 SRZ7879172,Sheridan2019widespread,H. sapiens,NET-seq,HEK293T Flp-In (cell line),doxycycline (1day),2,24M,2 SRZ7879175,Sheridan2019widespread,H. sapiens,NET-seq,HEK293T Flp-In (cell line),NaN,1,40M,4 SRZ7879179,Sheridan2019widespread,H. sapiens,NET-seq,HEK293T Flp-In (cell line),NaN,2,30M,3 SRZ826209,Lam2013rev,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,122M,3 SRZ826217,Lam2013rev,M. musculus,GRO-seq,bone marrow derived macrophage (primary),NaN,1,186M,4 SRZ826225,Lam2013rev,M. musculus,GRO-cap,RAW264.7 (cell line),NaN,1,24M,3 SRZ8283303,Yu2020negative,M. musculus,PRO-seq,bone marrow derived macrophage (primary),NaN,1,24M,2 SRZ8283305,Yu2020negative,M. musculus,PRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (30min),1,23M,2 SRZ8283307,Yu2020negative,M. musculus,PRO-seq,bone marrow derived macrophage (primary),NaN,1,26M,2 SRZ8283309,Yu2020negative,M. musculus,PRO-seq,bone marrow derived macrophage (primary),lipopolysaccharide (30min),1,26M,2 SRZ8713368,Vihervaara2021stress,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),1,10M,4 SRZ8713371,Vihervaara2021stress,M. musculus,PRO-seq,MEF (cell line),heat shock (1hr),1,7M,5 SRZ8795359,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),NaN,1,39M,4 SRZ8795367,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),NaN,2,39M,4 SRZ8795375,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),NaN,3,41M,4 SRZ8795383,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),1,36M,4 SRZ8795391,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),2,38M,4 SRZ8795399,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),3,40M,4 SRZ8795407,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),doxycycline (2day),1,38M,4 SRZ8795415,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),doxycycline (2day),2,36M,3 SRZ8795423,Kriaucionis2019unpublished,H. sapiens,PRO-cap,HEK293T Flp-In (cell line),doxycycline (2day),3,38M,4 SRZ8795431,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,1,84M,1 SRZ8795439,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,2,87M,1 SRZ8795447,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),NaN,3,83M,1 SRZ8795455,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),1,82M,1 SRZ8795463,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),2,79M,1 SRZ8795471,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),5-aza-2'-deoxycytidine (2day),3,85M,1 SRZ8795479,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (2day),1,83M,1 SRZ8795487,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (2day),2,78M,1 SRZ8795495,Kriaucionis2019unpublished,H. sapiens,PRO-seq,HEK293T Flp-In (cell line),doxycycline (2day),3,79M,1 SRZ9007617,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,2,113M,1 SRZ9007619,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,3,62M,2 SRZ9007622,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),glucose-free media (2day),2,115M,1 SRZ9007625,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,2,108M,1 SRZ9007627,Etchegaray2019histone,M. musculus,PRO-seq,ESC (cell line),NaN,3,53M,1 SRZ929970,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),bromouridine (30min),1,59M,1 SRZ929974,Veloso2013genome-wide,H. sapiens,other,HF1 (cell line),bromouridine (30min),2,50M,1 SRZ929981,Veloso2013genome-wide,H. sapiens,other,skin fibroblast (primary),bromouridine (30min),1,68M,2 SRZ930649,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,35M,1 SRZ930653,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,7M,4 SRZ930655,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,12M,3 SRZ930657,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),1,6M,4 SRZ930659,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",1,36M,2 SRZ930663,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (6hr) , serum starvation (20hr)",1,6M,4 SRZ930665,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (12hr) , serum starvation (26hr)",1,13M,3 SRZ930667,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1day) , serum starvation (38hr)",1,6M,4 SRZ930677,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),serum starvation (14hr),3,44M,3 SRZ930682,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr)",5,43M,3 SRZ930691,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"DMSO (2hr) , serum starvation (15hr)",2,14M,3 SRZ930695,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , DMSO (2hr) , serum starvation (15hr)",2,22M,2 SRZ930701,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , actinomycin D (2hr) , serum starvation (15hr)",1,22M,4 SRZ930707,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , serum starvation (15hr) , triptolide (2hr)",1,18M,4 SRZ930712,Kaikkonen2013remodeling,M. musculus,GRO-seq,peritoneal macrophage (primary),"Kdo2-Lipid A (1hr) , alpha-amanitin (5hr) , serum starvation (15hr)",1,15M,3 SRZ935093,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),NaN,1,78M,2 SRZ935095,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),NaN,2,49M,2 SRZ935097,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (2min),1,69M,2 SRZ935099,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (2min),2,34M,1 SRZ935101,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (5min),1,61M,2 SRZ935103,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (5min),2,40M,2 SRZ935105,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (750s),1,64M,2 SRZ935107,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (750s),2,46M,2 SRZ935109,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (25min),1,69M,3 SRZ935111,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (25min),2,63M,3 SRZ935113,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (50min),1,78M,4 SRZ935115,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),flavopiridol (50min),2,71M,4 SRZ935121,Jonkers2014genome,M. musculus,GRO-seq,ESC (cell line),triptolide (25min),1,56M,3 SRZ942404,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"doxycycline withdrawal (5970min) , DRB (210min)",1,106M,4 SRZ942407,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (5980min)",1,94M,4 SRZ942410,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (5995min)",1,94M,3 SRZ942413,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (6010min)",1,63M,3 SRZ942415,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,92M,4 SRZ942418,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,84M,3 SRZ942421,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,73M,3 SRZ942423,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,75M,3 SRZ942425,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"doxycycline withdrawal (5970min) , DRB (210min)",1,102M,4 SRZ942429,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (5980min)",1,97M,4 SRZ942433,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (5995min)",1,69M,3 SRZ942436,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),"DRB (210min) , doxycycline withdrawal (6010min)",1,71M,3 SRZ942439,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,94M,4 SRZ942443,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,81M,4 SRZ942446,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,79M,3 SRZ942449,Saponaro2014recql5,H. sapiens,GRO-seq,HEK293T (cell line),DRB (210min),1,74M,3 SRZ9833428,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),NaN,1,77M,1 SRZ9833431,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),NaN,2,60M,2 SRZ9833434,Wan2020h2bg53d,H. sapiens,PRO-seq,S2VP10 (cell line),NaN,3,59M,1