etrop commited on
Commit
4504d2d
1 Parent(s): 2f79d04

update the return values for cage

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Files changed (1) hide show
  1. genomics-long-range-benchmark.py +4 -0
genomics-long-range-benchmark.py CHANGED
@@ -269,6 +269,10 @@ class CagePredictionHandler(GenomicLRATaskHandler):
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  return_new_start_stop=True
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  )
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  # floor npy_idx to the nearest 1000
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  npz_file = np.load(
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  target_files[int((row["npy_idx"] // self.NPZ_SPLIT) * self.NPZ_SPLIT)]
 
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  return_new_start_stop=True
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  )
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+ if self.sequence_length >= self.DEFAULT_LENGTH:
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+ new_start = start
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+ new_stop = stop
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+
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  # floor npy_idx to the nearest 1000
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  npz_file = np.load(
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  target_files[int((row["npy_idx"] // self.NPZ_SPLIT) * self.NPZ_SPLIT)]